FFCP PHASE1:Mm9::chr10:88996274..88996286,-: Difference between revisions
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{{FFCP|EntrezGene=20186|HGNC=|MCL_coexpression_id=8|UniProt=D3YTT2|association_with_transcript=43bp_to_ENSMUST00000105297_5end|description=CAGE_peak_4_at_Nr1h4_5end|id=chr10:88996274..88996286,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.92e-12,5;CL:0002494,5.52e-07,3;CL:0000737,5.52e-07,3;CL:0000746,5.52e-07,3;CL:0000513,5.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!3.25e-17!47;UBERON:0002107!2.42e-16!22;UBERON:0007499!2.42e-16!22;UBERON:0006925!2.42e-16!22;UBERON:0009497!2.42e-16!22;UBERON:0000015!2.42e-16!22;UBERON:0002423!2.42e-16!22;UBERON:0006235!2.42e-16!22;UBERON:0008835!2.42e-16!22;UBERON:0003894!2.42e-16!22;UBERON:0004161!2.42e-16!22;UBERON:0008836!2.42e-16!22;UBERON:0003914!5.30e-16!47;UBERON:0005172!1.18e-15!49;UBERON:0005173!1.18e-15!49;UBERON:0002417!1.18e-15!49;UBERON:0000916!1.18e-15!49;UBERON:0009854!3.94e-15!23;UBERON:0009856!3.94e-15!23;UBERON:0002365!2.19e-14!25;UBERON:0002330!2.19e-14!25;UBERON:0009569!2.64e-12!66;UBERON:0002100!6.43e-10!98;UBERON:0005177!3.20e-09!85|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.31e-33,45;UBERON:0002107,1.29e-30,22;UBERON:0007499,1.29e-30,22;UBERON:0006925,1.29e-30,22;UBERON:0009497,1.29e-30,22;UBERON:0000015,1.29e-30,22;UBERON:0002423,1.29e-30,22;UBERON:0006235,1.29e-30,22;UBERON:0008835,1.29e-30,22;UBERON:0003894,1.29e-30,22;UBERON:0004161,1.29e-30,22;UBERON:0008836,1.29e-30,22;UBERON:0009854,4.48e-29,23;UBERON:0009856,4.48e-29,23;UBERON:0003104,1.25e-26,61;UBERON:0009142,1.25e-26,61;UBERON:0002365,2.29e-26,25;UBERON:0002330,2.29e-26,25;UBERON:0005172,1.37e-25,49;UBERON:0005173,1.37e-25,49;UBERON:0002417,1.37e-25,49;UBERON:0000916,1.37e-25,49;UBERON:0002368,4.74e-18,60;UBERON:0009569,2.67e-17,66;UBERON:0003914,1.05e-16,47;UBERON:0002530,3.57e-16,65;UBERON:0002100,1.69e-14,90;UBERON:0002369,1.72e-14,7;UBERON:0006858,1.72e-14,7;UBERON:0000949,5.46e-14,72;UBERON:0005177,2.21e-13,79;UBERON:0000490,1.77e-11,66;UBERON:0003929,1.83e-09,55;UBERON:0004921,4.97e-07,114;UBERON:0001007,8.32e-07,116;UBERON:0001555,8.32e-07,116;UBERON:0007026,8.32e-07,116|phase1_expression=1.12104192973356,0,0.909998478779072,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0,0.430942465371778,4.3705386474966,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0,0.55994568650145,0,0,0,0,3.8588915405392,2.29226751951005,3.09403255366465,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.831287161174641,5.50742528533188,12.0459342777394,5.439770669662,3.2382191498269,6.49776417447669,8.51251085484938,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0.517875767294343,4.45326417194474,1.04091196059682,2.74018930480927,3.68984795609694,4.6724018571313,4.9387256996996,3.76999773989026,0,0.289198713839823,0,0,0,0.484875253135222,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0.697601834251224,0.268273401399619,0.583826711835847,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0,0.403367049246685,1.11189021922435,0.760902504450237,1.42358718463353,0,0.502670417600539,0.994782360205754,0.38992817423824,1.79763881730844,1.29682829924817,1.99141273254367,0,0.342745537829186,0,0.407302655690628,0,0.420814919341911,1.64414996523069,0.738050739898011,0.627994911365499,0.370191491765402,16.8977997439675,0.333690211432188,0.589676985339609,0.449724224769707,1.42002084971952,1.68824011826692,0.763877555344259,4.02774592431135,3.40483976227574,3.0201755450689,7.18841032636773,4.83783231969054,8.42501717409313,9.85057623993736,10.225652570749,8.20153986317724,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,3.54850213020672,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.49465875882444,0,0,0.238744688006273,0,0.874442509889552,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.909188012978695,0,0.90730481304255,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.561849044819294,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.77468420592983,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p4@Nr1h4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20186 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YTT2 | |||
|association_with_transcript=43bp_to_ENSMUST00000105297_5end | |||
|cluster_id=chr10:88996274..88996286,- | |||
|description=CAGE_peak_4_at_Nr1h4_5end | |||
|id=chr10:88996274..88996286,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.92e-12,5;CL:0002494,5.52e-07,3;CL:0000737,5.52e-07,3;CL:0000746,5.52e-07,3;CL:0000513,5.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.25e-17!47;UBERON:0002107!2.42e-16!22;UBERON:0007499!2.42e-16!22;UBERON:0006925!2.42e-16!22;UBERON:0009497!2.42e-16!22;UBERON:0000015!2.42e-16!22;UBERON:0002423!2.42e-16!22;UBERON:0006235!2.42e-16!22;UBERON:0008835!2.42e-16!22;UBERON:0003894!2.42e-16!22;UBERON:0004161!2.42e-16!22;UBERON:0008836!2.42e-16!22;UBERON:0003914!5.30e-16!47;UBERON:0005172!1.18e-15!49;UBERON:0005173!1.18e-15!49;UBERON:0002417!1.18e-15!49;UBERON:0000916!1.18e-15!49;UBERON:0009854!3.94e-15!23;UBERON:0009856!3.94e-15!23;UBERON:0002365!2.19e-14!25;UBERON:0002330!2.19e-14!25;UBERON:0009569!2.64e-12!66;UBERON:0002100!6.43e-10!98;UBERON:0005177!3.20e-09!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.31e-33,45;UBERON:0002107,1.29e-30,22;UBERON:0007499,1.29e-30,22;UBERON:0006925,1.29e-30,22;UBERON:0009497,1.29e-30,22;UBERON:0000015,1.29e-30,22;UBERON:0002423,1.29e-30,22;UBERON:0006235,1.29e-30,22;UBERON:0008835,1.29e-30,22;UBERON:0003894,1.29e-30,22;UBERON:0004161,1.29e-30,22;UBERON:0008836,1.29e-30,22;UBERON:0009854,4.48e-29,23;UBERON:0009856,4.48e-29,23;UBERON:0003104,1.25e-26,61;UBERON:0009142,1.25e-26,61;UBERON:0002365,2.29e-26,25;UBERON:0002330,2.29e-26,25;UBERON:0005172,1.37e-25,49;UBERON:0005173,1.37e-25,49;UBERON:0002417,1.37e-25,49;UBERON:0000916,1.37e-25,49;UBERON:0002368,4.74e-18,60;UBERON:0009569,2.67e-17,66;UBERON:0003914,1.05e-16,47;UBERON:0002530,3.57e-16,65;UBERON:0002100,1.69e-14,90;UBERON:0002369,1.72e-14,7;UBERON:0006858,1.72e-14,7;UBERON:0000949,5.46e-14,72;UBERON:0005177,2.21e-13,79;UBERON:0000490,1.77e-11,66;UBERON:0003929,1.83e-09,55;UBERON:0004921,4.97e-07,114;UBERON:0001007,8.32e-07,116;UBERON:0001555,8.32e-07,116;UBERON:0007026,8.32e-07,116 | |||
|phase1_expression=1.12104192973356,0,0.909998478779072,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0,0.430942465371778,4.3705386474966,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0,0.55994568650145,0,0,0,0,3.8588915405392,2.29226751951005,3.09403255366465,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.831287161174641,5.50742528533188,12.0459342777394,5.439770669662,3.2382191498269,6.49776417447669,8.51251085484938,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0.517875767294343,4.45326417194474,1.04091196059682,2.74018930480927,3.68984795609694,4.6724018571313,4.9387256996996,3.76999773989026,0,0.289198713839823,0,0,0,0.484875253135222,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0.697601834251224,0.268273401399619,0.583826711835847,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0,0.403367049246685,1.11189021922435,0.760902504450237,1.42358718463353,0,0.502670417600539,0.994782360205754,0.38992817423824,1.79763881730844,1.29682829924817,1.99141273254367,0,0.342745537829186,0,0.407302655690628,0,0.420814919341911,1.64414996523069,0.738050739898011,0.627994911365499,0.370191491765402,16.8977997439675,0.333690211432188,0.589676985339609,0.449724224769707,1.42002084971952,1.68824011826692,0.763877555344259,4.02774592431135,3.40483976227574,3.0201755450689,7.18841032636773,4.83783231969054,8.42501717409313,9.85057623993736,10.225652570749,8.20153986317724,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,3.54850213020672,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.49465875882444,0,0,0.238744688006273,0,0.874442509889552,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.909188012978695,0,0.90730481304255,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.561849044819294,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.77468420592983,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p4@Nr1h4 | |||
}} |
Revision as of 00:19, 5 August 2015
Short description: | p4@Nr1h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nr1h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 43bp_to_ENSMUST00000105297_5end |
EntrezGene: | 20186 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.92e-12 | 5 |
cardiocyte | 5.52e-07 | 3 |
striated muscle cell | 5.52e-07 | 3 |
cardiac muscle cell | 5.52e-07 | 3 |
cardiac muscle myoblast | 5.52e-07 | 3 |