FFCP PHASE1:Mm9::chr11:3005667..3005684,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:3005667..3005684,+|id=chr11:3005667..3005684,+|ontology_enrichment_celltype=CL:0000988!1.97e-19!32;CL:0002032!1.97e-19!32;CL:0000037!1.97e-19!32;CL:0000566!1.97e-19!32;CL:0000837!1.97e-19!32;CL:0000838!4.32e-19!12;CL:0000542!1.98e-17!13;CL:0000051!1.98e-17!13;CL:0000084!3.82e-17!11;CL:0000827!3.82e-17!11;CL:0002031!7.26e-16!25;CL:0000791!7.44e-14!9;CL:0000789!7.44e-14!9;CL:0002420!7.44e-14!9;CL:0002419!7.44e-14!9;CL:0000790!7.44e-14!9;CL:0000738!9.63e-13!17;CL:0002087!9.63e-13!17;CL:0002320!4.74e-12!46;CL:0000134!4.74e-12!46;CL:0000893!6.45e-12!6;CL:0002489!6.45e-12!6;CL:0000898!6.45e-12!6;CL:0000809!6.45e-12!6;CL:0000810!6.45e-12!6;CL:0000895!6.45e-12!6;CL:0000808!6.45e-12!6;CL:0000894!6.45e-12!6;CL:0000806!6.45e-12!6;CL:0000807!6.45e-12!6;CL:0000805!6.45e-12!6;CL:0002425!6.45e-12!6;CL:0002436!6.45e-12!6;CL:0002427!6.45e-12!6;CL:0002428!6.45e-12!6;CL:0002429!6.45e-12!6;CL:0002433!6.45e-12!6;CL:0002431!6.45e-12!6;CL:0002432!6.45e-12!6;CL:0000624!6.54e-12!8;CL:0000219!1.42e-09!54;CL:0000034!8.17e-08!97;CL:0000063!5.07e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,7.44e-09,32;CL:0002032,7.44e-09,32;CL:0000037,7.44e-09,32;CL:0000837,7.44e-09,32;CL:0002031,1.45e-08,25;CL:0000838,2.08e-08,12;CL:0000542,8.90e-08,13;CL:0000051,8.90e-08,13;CL:0000625,1.78e-07,1;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000355,4.29e-07,9|ontology_enrichment_disease=DOID:0060100!5.65e-08!3;DOID:4045!5.65e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-20,3;DOID:4045,3.45e-20,3;DOID:0050686,2.15e-10,6|ontology_enrichment_uberon=UBERON:0002193!2.34e-16!48;UBERON:0002390!6.81e-16!45;UBERON:0003061!6.81e-16!45;UBERON:0004177!4.25e-13!29;UBERON:0002384!4.74e-12!46;UBERON:0002405!1.69e-10!70;UBERON:0002370!2.01e-09!23;UBERON:0000974!2.01e-09!23;UBERON:0004807!2.01e-09!23;UBERON:0005058!2.01e-09!23;UBERON:0003351!2.01e-09!23;UBERON:0009113!2.01e-09!23;UBERON:0003295!2.01e-09!23;UBERON:0009722!2.01e-09!23;UBERON:0005562!2.01e-09!23;UBERON:0007690!2.01e-09!23;UBERON:0003081!5.21e-09!88;UBERON:0006562!6.31e-09!24;UBERON:0003408!6.31e-09!24;UBERON:0001557!6.31e-09!24;UBERON:0001042!6.31e-09!24;UBERON:0008814!6.31e-09!24;UBERON:0009145!6.31e-09!24;UBERON:0000072!1.16e-07!27;UBERON:0005057!7.82e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.33e-07,1;UBERON:0001097,1.33e-07,1;UBERON:0003968,1.33e-07,1;UBERON:0001467,1.33e-07,1;UBERON:0001134,4.29e-07,9;UBERON:0002036,4.29e-07,9;UBERON:0002385,4.29e-07,9;UBERON:0000486,4.29e-07,9;UBERON:0007503,4.29e-07,9;UBERON:0001015,4.29e-07,9;UBERON:0002329,4.29e-07,9;UBERON:0003082,4.29e-07,9;UBERON:0003059,4.29e-07,9;UBERON:0007282,4.29e-07,9;UBERON:0004290,4.29e-07,9;UBERON:0009618,4.29e-07,9|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0.468129052643987,0.34243593645101,0.159544317990673,2.56801094896809,1.04904482902797,0,0.607425802169478,0,2.05050407482854,0.822686601634433,2.97072756258621,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,4.6880120671428,10.470474879476,8.82347232046521,14.3439551841274,9.22469670759192,0,0,0,0,0,0,0,0,0,2.01339127269284,0,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,1.07833612055328,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.509935289981566,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:3005667..3005684,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:3005667..3005684,+ | |||
|description=CAGE_peak_at_chr11:3005667..3005684,+ | |||
|id=chr11:3005667..3005684,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.97e-19!32;CL:0002032!1.97e-19!32;CL:0000037!1.97e-19!32;CL:0000566!1.97e-19!32;CL:0000837!1.97e-19!32;CL:0000838!4.32e-19!12;CL:0000542!1.98e-17!13;CL:0000051!1.98e-17!13;CL:0000084!3.82e-17!11;CL:0000827!3.82e-17!11;CL:0002031!7.26e-16!25;CL:0000791!7.44e-14!9;CL:0000789!7.44e-14!9;CL:0002420!7.44e-14!9;CL:0002419!7.44e-14!9;CL:0000790!7.44e-14!9;CL:0000738!9.63e-13!17;CL:0002087!9.63e-13!17;CL:0002320!4.74e-12!46;CL:0000134!4.74e-12!46;CL:0000893!6.45e-12!6;CL:0002489!6.45e-12!6;CL:0000898!6.45e-12!6;CL:0000809!6.45e-12!6;CL:0000810!6.45e-12!6;CL:0000895!6.45e-12!6;CL:0000808!6.45e-12!6;CL:0000894!6.45e-12!6;CL:0000806!6.45e-12!6;CL:0000807!6.45e-12!6;CL:0000805!6.45e-12!6;CL:0002425!6.45e-12!6;CL:0002436!6.45e-12!6;CL:0002427!6.45e-12!6;CL:0002428!6.45e-12!6;CL:0002429!6.45e-12!6;CL:0002433!6.45e-12!6;CL:0002431!6.45e-12!6;CL:0002432!6.45e-12!6;CL:0000624!6.54e-12!8;CL:0000219!1.42e-09!54;CL:0000034!8.17e-08!97;CL:0000063!5.07e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.44e-09,32;CL:0002032,7.44e-09,32;CL:0000037,7.44e-09,32;CL:0000837,7.44e-09,32;CL:0002031,1.45e-08,25;CL:0000838,2.08e-08,12;CL:0000542,8.90e-08,13;CL:0000051,8.90e-08,13;CL:0000625,1.78e-07,1;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000355,4.29e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.65e-08!3;DOID:4045!5.65e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-20,3;DOID:4045,3.45e-20,3;DOID:0050686,2.15e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.34e-16!48;UBERON:0002390!6.81e-16!45;UBERON:0003061!6.81e-16!45;UBERON:0004177!4.25e-13!29;UBERON:0002384!4.74e-12!46;UBERON:0002405!1.69e-10!70;UBERON:0002370!2.01e-09!23;UBERON:0000974!2.01e-09!23;UBERON:0004807!2.01e-09!23;UBERON:0005058!2.01e-09!23;UBERON:0003351!2.01e-09!23;UBERON:0009113!2.01e-09!23;UBERON:0003295!2.01e-09!23;UBERON:0009722!2.01e-09!23;UBERON:0005562!2.01e-09!23;UBERON:0007690!2.01e-09!23;UBERON:0003081!5.21e-09!88;UBERON:0006562!6.31e-09!24;UBERON:0003408!6.31e-09!24;UBERON:0001557!6.31e-09!24;UBERON:0001042!6.31e-09!24;UBERON:0008814!6.31e-09!24;UBERON:0009145!6.31e-09!24;UBERON:0000072!1.16e-07!27;UBERON:0005057!7.82e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.33e-07,1;UBERON:0001097,1.33e-07,1;UBERON:0003968,1.33e-07,1;UBERON:0001467,1.33e-07,1;UBERON:0001134,4.29e-07,9;UBERON:0002036,4.29e-07,9;UBERON:0002385,4.29e-07,9;UBERON:0000486,4.29e-07,9;UBERON:0007503,4.29e-07,9;UBERON:0001015,4.29e-07,9;UBERON:0002329,4.29e-07,9;UBERON:0003082,4.29e-07,9;UBERON:0003059,4.29e-07,9;UBERON:0007282,4.29e-07,9;UBERON:0004290,4.29e-07,9;UBERON:0009618,4.29e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0.468129052643987,0.34243593645101,0.159544317990673,2.56801094896809,1.04904482902797,0,0.607425802169478,0,2.05050407482854,0.822686601634433,2.97072756258621,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,4.6880120671428,10.470474879476,8.82347232046521,14.3439551841274,9.22469670759192,0,0,0,0,0,0,0,0,0,2.01339127269284,0,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,1.07833612055328,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.509935289981566,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:3005667..3005684,+ | |||
}} |
Latest revision as of 18:51, 5 August 2015
Short description: | p@chr11:3005667..3005684, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:3005667..3005684, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.44e-09 | 32 |
hematopoietic oligopotent progenitor cell | 7.44e-09 | 32 |
hematopoietic stem cell | 7.44e-09 | 32 |
hematopoietic multipotent progenitor cell | 7.44e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 1.45e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.08e-08 | 12 |
lymphocyte | 8.90e-08 | 13 |
common lymphoid progenitor | 8.90e-08 | 13 |
CD8-positive, alpha-beta T cell | 1.78e-07 | 1 |
lymphocyte of B lineage | 2.37e-07 | 1 |
B cell | 2.37e-07 | 1 |
pro-B cell | 2.37e-07 | 1 |
multi-potent skeletal muscle stem cell | 4.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.33e-07 | 1 |
axillary lymph node | 1.33e-07 | 1 |
peripheral lymph node | 1.33e-07 | 1 |
shoulder | 1.33e-07 | 1 |
skeletal muscle tissue | 4.29e-07 | 9 |
striated muscle tissue | 4.29e-07 | 9 |
muscle tissue | 4.29e-07 | 9 |
multilaminar epithelium | 4.29e-07 | 9 |
epithelial vesicle | 4.29e-07 | 9 |
musculature | 4.29e-07 | 9 |
somite | 4.29e-07 | 9 |
myotome | 4.29e-07 | 9 |
presomitic mesoderm | 4.29e-07 | 9 |
presumptive segmental plate | 4.29e-07 | 9 |
dermomyotome | 4.29e-07 | 9 |
trunk paraxial mesoderm | 4.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.45e-20 | 3 |
muscle cancer | 3.45e-20 | 3 |
organ system cancer | 2.15e-10 | 6 |