Personal tools

FFCP PHASE1:Mm9::chr11:74739318..74739335,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=103677|HGNC=|UniProt=P61406|association_with_transcript=0bp_to_ENSMUST00000045281_5end|description=CAGE_peak_3_at_Smg6_5end|id=chr11:74739318..74739335,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.17e-10!333;UBERON:0000922!2.96e-08!328;UBERON:0002323!6.66e-07!37;UBERON:0004458!6.66e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0002323,6.63e-07,37;UBERON:0004458,6.63e-07,37|phase1_expression=4.00372117761985,3.83872948403297,0.454999239389536,4.83942738090928,3.50627010962443,2.85394762250213,1.63528848416868,2.06597317506522,1.97104211012333,1.63845168425395,4.45166717386313,3.82906363177615,2.39681021903688,1.48614684112296,7.66152452176024,5.87178275430495,4.19737126876888,3.47008381894061,3.56497527374921,2.54633791078818,5.10259740906419,1.09220046320974,0.261199789138935,1.91990907352088,1.14704640533585,1.72269589234506,0,0.646413698057667,1.71021077510736,2.01624103807945,0.886922042621219,3.17515336729816,1.84519436275371,0,2.02196133825892,1.32987716286794,4.28755648150975,1.67412652294763,3.1253413780952,1.0470474879476,1.76469446409304,2.73218193983378,0.971020706062307,2.89562681343828,3.64956952390252,2.56965453026354,1.56478268869608,0.436050312760893,0.439372365468944,1.74986909166855,1.81982348112971,0,3.85899993932794,2.17608642603403,2.01656279485478,2.05807548828758,1.71920063963254,1.03134418455488,3.43937983461316,2.64495489636016,9.50747105259269,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,0.384218305321555,7.46565208621039,4.59020190327748,6.52007380189284,2.28520787523043,2.65042249141936,4.89963196859816,5.46319184803947,6.43453150627015,1.10115880999389,4.21368215681119,2.76491759861238,7.12185953743047,5.03182039813253,6.25096044668112,3.35019598801657,4.50210088025344,3.66715794664344,1.76777151284201,2.70506193518296,4.65998614563251,2.72614295999463,1.66257432234928,6.95674772884027,1.72084775396277,0.679971333707751,0,0.649776417447669,2.24013443548668,1.96622188184453,2.04516387093669,1.03914401841148,1.06001872353102,2.67602497575693,5.13305909657271,15.2883143823987,0,1.08245520505607,2.53359865475099,2.02209778005913,2.8545969929765,6.73238497482646,4.60170631100957,2.08182392119363,3.34912026143355,3.45923245884088,2.56228488939458,4.9387256996996,2.76466500925286,2.71914464507811,3.90418263683761,1.76922110389975,4.20593809863264,5.07935492458905,4.363877278217,7.45567044872489,9.9545470983926,6.70229461803056,3.0654846625031,2.39630249011841,0.599902730993408,1.14363204365758,4.19413790333504,2.74500361691176,5.52879149296603,3.82413504423008,4.34716277461562,2.70124457927428,4.2182728397617,5.09196819251581,2.86136032403214,2.52722758433675,3.15662783829711,5.46505860443356,3.44853156650209,5.22180176435513,7.53524089178575,8.57259889306731,8.19927809823039,7.21503279109912,3.62184719034622,4.095791865724,6.42960672570586,6.68614271823006,2.84954452155847,4.72680323683516,7.66154766348766,6.37924622864625,5.7719937377363,0.702213187313235,1.02939162845886,0.284163499395593,4.55676699578104,4.45599513964083,3.96136535214233,4.7348947117042,4.32881309844288,3.39387648352232,3.25547522650571,4.82892122519315,3.15266424391358,5.43047504714485,4.26835406605648,3.56702762001765,4.09359964790931,1.75640092232841,2.81833479396781,3.36463917702604,5.55684906848136,5.28670052774077,2.11560453330835,6.82522401712749,6.50262681209228,2.96395161040815,3.83198696784351,3.33567065767305,2.85338439168839,5.21981967698963,2.79988223030818,3.51869292320377,2.78539060857611,3.50935356814416,1.79763881730844,2.16138049874694,4.77939055810481,2.46568271239006,5.48392860526698,3.38123207019241,2.64746726198909,4.65485969202302,5.54072977133517,5.6280518040589,4.72352473534727,3.1399745568275,3.20832626196681,2.96452627087149,4.83850806576673,3.93117990226406,3.37293168577281,3.85434230638156,2.65294875727659,1.78238096246994,1.15078454980324,3.72911021582581,3.84385978463314,8.62609239164127,2.97712758134803,3.43241440426017,4.2938409251009,1.4351793081753,2.8946611281802,2.58654466233247,3.60033682363921,3.58522948172457,4.92260748748046,6.80601720036656,5.3602002381381,4.76087281772027,8.00047956216975,5.99013547603526,5.53661724121937,7.97273843287435,3.93271955317771,3.9717545829156,5.93061140184197,3.01582567878545,1.08781136763742,2.45882136509518,3.58717770196152,4.49541651965817,5.50894926983355,1.96721934452011,2.27223834483936,3.78609863299508,2.34263246577983,3.01592756825919,2.15071918157297,3.11918143715352,5.94460714656548,2.42886421004937,3.79932615284705,4.74345333535828,4.4984984299053,3.83238230062325,4.27357448801413,7.65568708961808,3.62934270539578,9.2921596837974,3.39892890616974,2.41858845571801,3.39489143560617,2.36241514304618,3.68922177532713,5.94385074286909,6.18007340111759,6.06045543254026,4.10847785316561,9.48767477174989,8.25084345985495,5.10659408630682,4.14140516272013,3.49268446213437,5.5727629108214,5.49754724291048,5.17269571046005,2.96188237083818,6.08929898229199,3.52007562095566,4.2366414172764,3.52845436887939,11.0473789470792,7.26589920131575,7.11692514152239,5.84924485615369,5.0883678920969,1.1659233465194,4.45020724825223,2.73393409276564,3.09580301944834,4.8150577116125,7.15800136617826,5.74115756428306,4.34678529092393,2.54967644990783,1.81936888020755,1.93479963326193,0.954670618015114,4.58687190692646,3.86306987541013,4.64422965533745,4.18176592028937,3.9305261474312,4.45052343069908,4.62859352061881,3.66458318777641,3.88844919875379,1.24267862617385,7.32800820289447,5.08356256549528,4.13646226142744,4.66682852025714,5.03723311563151,6.08242051766801,7.74557775061976,8.46328501485676,7.23529476537405,8.21386010808421,8.3528701814781,3.47612232690996,2.43270258348197,1.95150818613172,2.46849563657811,0.895133478337407,3.17890167650024,3.00488623799922,3.2491695978407,4.03865799792591,3.35309949281999,3.93222122033678,3.60594158737084,4.9068039236568,4.09069157635491,4.30787728868902,0.665957860122194,2.06341870201794,1.67884616364078,5.40930863290133,2.81523713176773,3.84618410961257,3.42989406526505,4.01257683228291,2.25900737046827,0.920650473014354,0.572895513439397,3.60891682921744,2.74033007908257,1.5107877947794,6.07520250208625,5.40385443869065,3.17199686288943,3.62432218226274,4.15149390336707,5.1873233542134,3.75613932659095,5.83456120963906,2.93458427679175,4.04455718590031,4.66718128383392,4.53277125925567,3.53011130550997,5.81203587056734,3.54871019846336,3.77252682772152,5.24392441831341,4.92993673517493,6.89225627467359,3.33405583898152,5.44656331940821,6.75182271622968,5.76920261124629,4.71036544430071,8.22886205724997,5.50174999093946,5.96090474868302,4.50573891560218,4.70546902076653,5.66917872874233,4.024415403201,4.47218509444333,5.83957689537206,3.36685362994643,5.69448086996036,7.2893316957917,6.95692773388472,5.57772628269478,2.89359916471712,3.99696924700713,4.67863216890817,6.44613162144895,4.3996316375834,2.8676884485537,3.47801753430632|short_description=p3@Smg6}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:103677
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P61406
|association_with_transcript=0bp_to_ENSMUST00000045281_5end
|cluster_id=chr11:74739318..74739335,+
|description=CAGE_peak_3_at_Smg6_5end
|id=chr11:74739318..74739335,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.17e-10!333;UBERON:0000922!2.96e-08!328;UBERON:0002323!6.66e-07!37;UBERON:0004458!6.66e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0002323,6.63e-07,37;UBERON:0004458,6.63e-07,37
|phase1_expression=4.00372117761985,3.83872948403297,0.454999239389536,4.83942738090928,3.50627010962443,2.85394762250213,1.63528848416868,2.06597317506522,1.97104211012333,1.63845168425395,4.45166717386313,3.82906363177615,2.39681021903688,1.48614684112296,7.66152452176024,5.87178275430495,4.19737126876888,3.47008381894061,3.56497527374921,2.54633791078818,5.10259740906419,1.09220046320974,0.261199789138935,1.91990907352088,1.14704640533585,1.72269589234506,0,0.646413698057667,1.71021077510736,2.01624103807945,0.886922042621219,3.17515336729816,1.84519436275371,0,2.02196133825892,1.32987716286794,4.28755648150975,1.67412652294763,3.1253413780952,1.0470474879476,1.76469446409304,2.73218193983378,0.971020706062307,2.89562681343828,3.64956952390252,2.56965453026354,1.56478268869608,0.436050312760893,0.439372365468944,1.74986909166855,1.81982348112971,0,3.85899993932794,2.17608642603403,2.01656279485478,2.05807548828758,1.71920063963254,1.03134418455488,3.43937983461316,2.64495489636016,9.50747105259269,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,0.384218305321555,7.46565208621039,4.59020190327748,6.52007380189284,2.28520787523043,2.65042249141936,4.89963196859816,5.46319184803947,6.43453150627015,1.10115880999389,4.21368215681119,2.76491759861238,7.12185953743047,5.03182039813253,6.25096044668112,3.35019598801657,4.50210088025344,3.66715794664344,1.76777151284201,2.70506193518296,4.65998614563251,2.72614295999463,1.66257432234928,6.95674772884027,1.72084775396277,0.679971333707751,0,0.649776417447669,2.24013443548668,1.96622188184453,2.04516387093669,1.03914401841148,1.06001872353102,2.67602497575693,5.13305909657271,15.2883143823987,0,1.08245520505607,2.53359865475099,2.02209778005913,2.8545969929765,6.73238497482646,4.60170631100957,2.08182392119363,3.34912026143355,3.45923245884088,2.56228488939458,4.9387256996996,2.76466500925286,2.71914464507811,3.90418263683761,1.76922110389975,4.20593809863264,5.07935492458905,4.363877278217,7.45567044872489,9.9545470983926,6.70229461803056,3.0654846625031,2.39630249011841,0.599902730993408,1.14363204365758,4.19413790333504,2.74500361691176,5.52879149296603,3.82413504423008,4.34716277461562,2.70124457927428,4.2182728397617,5.09196819251581,2.86136032403214,2.52722758433675,3.15662783829711,5.46505860443356,3.44853156650209,5.22180176435513,7.53524089178575,8.57259889306731,8.19927809823039,7.21503279109912,3.62184719034622,4.095791865724,6.42960672570586,6.68614271823006,2.84954452155847,4.72680323683516,7.66154766348766,6.37924622864625,5.7719937377363,0.702213187313235,1.02939162845886,0.284163499395593,4.55676699578104,4.45599513964083,3.96136535214233,4.7348947117042,4.32881309844288,3.39387648352232,3.25547522650571,4.82892122519315,3.15266424391358,5.43047504714485,4.26835406605648,3.56702762001765,4.09359964790931,1.75640092232841,2.81833479396781,3.36463917702604,5.55684906848136,5.28670052774077,2.11560453330835,6.82522401712749,6.50262681209228,2.96395161040815,3.83198696784351,3.33567065767305,2.85338439168839,5.21981967698963,2.79988223030818,3.51869292320377,2.78539060857611,3.50935356814416,1.79763881730844,2.16138049874694,4.77939055810481,2.46568271239006,5.48392860526698,3.38123207019241,2.64746726198909,4.65485969202302,5.54072977133517,5.6280518040589,4.72352473534727,3.1399745568275,3.20832626196681,2.96452627087149,4.83850806576673,3.93117990226406,3.37293168577281,3.85434230638156,2.65294875727659,1.78238096246994,1.15078454980324,3.72911021582581,3.84385978463314,8.62609239164127,2.97712758134803,3.43241440426017,4.2938409251009,1.4351793081753,2.8946611281802,2.58654466233247,3.60033682363921,3.58522948172457,4.92260748748046,6.80601720036656,5.3602002381381,4.76087281772027,8.00047956216975,5.99013547603526,5.53661724121937,7.97273843287435,3.93271955317771,3.9717545829156,5.93061140184197,3.01582567878545,1.08781136763742,2.45882136509518,3.58717770196152,4.49541651965817,5.50894926983355,1.96721934452011,2.27223834483936,3.78609863299508,2.34263246577983,3.01592756825919,2.15071918157297,3.11918143715352,5.94460714656548,2.42886421004937,3.79932615284705,4.74345333535828,4.4984984299053,3.83238230062325,4.27357448801413,7.65568708961808,3.62934270539578,9.2921596837974,3.39892890616974,2.41858845571801,3.39489143560617,2.36241514304618,3.68922177532713,5.94385074286909,6.18007340111759,6.06045543254026,4.10847785316561,9.48767477174989,8.25084345985495,5.10659408630682,4.14140516272013,3.49268446213437,5.5727629108214,5.49754724291048,5.17269571046005,2.96188237083818,6.08929898229199,3.52007562095566,4.2366414172764,3.52845436887939,11.0473789470792,7.26589920131575,7.11692514152239,5.84924485615369,5.0883678920969,1.1659233465194,4.45020724825223,2.73393409276564,3.09580301944834,4.8150577116125,7.15800136617826,5.74115756428306,4.34678529092393,2.54967644990783,1.81936888020755,1.93479963326193,0.954670618015114,4.58687190692646,3.86306987541013,4.64422965533745,4.18176592028937,3.9305261474312,4.45052343069908,4.62859352061881,3.66458318777641,3.88844919875379,1.24267862617385,7.32800820289447,5.08356256549528,4.13646226142744,4.66682852025714,5.03723311563151,6.08242051766801,7.74557775061976,8.46328501485676,7.23529476537405,8.21386010808421,8.3528701814781,3.47612232690996,2.43270258348197,1.95150818613172,2.46849563657811,0.895133478337407,3.17890167650024,3.00488623799922,3.2491695978407,4.03865799792591,3.35309949281999,3.93222122033678,3.60594158737084,4.9068039236568,4.09069157635491,4.30787728868902,0.665957860122194,2.06341870201794,1.67884616364078,5.40930863290133,2.81523713176773,3.84618410961257,3.42989406526505,4.01257683228291,2.25900737046827,0.920650473014354,0.572895513439397,3.60891682921744,2.74033007908257,1.5107877947794,6.07520250208625,5.40385443869065,3.17199686288943,3.62432218226274,4.15149390336707,5.1873233542134,3.75613932659095,5.83456120963906,2.93458427679175,4.04455718590031,4.66718128383392,4.53277125925567,3.53011130550997,5.81203587056734,3.54871019846336,3.77252682772152,5.24392441831341,4.92993673517493,6.89225627467359,3.33405583898152,5.44656331940821,6.75182271622968,5.76920261124629,4.71036544430071,8.22886205724997,5.50174999093946,5.96090474868302,4.50573891560218,4.70546902076653,5.66917872874233,4.024415403201,4.47218509444333,5.83957689537206,3.36685362994643,5.69448086996036,7.2893316957917,6.95692773388472,5.57772628269478,2.89359916471712,3.99696924700713,4.67863216890817,6.44613162144895,4.3996316375834,2.8676884485537,3.47801753430632
|short_description=p3@Smg6
}}

Revision as of 23:01, 3 August 2015

Short description:p3@Smg6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smg6_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000045281_5end
EntrezGene:103677
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smg6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C68.57
eyeball, neonate N01.CNhs11140.1532-43E78.20
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G15.56
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.54
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A94.63
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D97.24
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A23.61
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
body cavity6.63e-0737
body cavity or lining6.63e-0737
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:74739318..74739335,%2B&oldid=3710471"