FFCP PHASE1:Mm9::chr12:8777846..8777868,+: Difference between revisions
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{{FFCP|EntrezGene=20969|HGNC=|MCL_coexpression_id=24|UniProt=P18828|association_with_transcript=-260bp_to_ENSMUST00000020911_5end|description=CAGE_peak_6_at_Sdc1_5end|id=chr12:8777846..8777868,+|ontology_enrichment_celltype=CL:0000066!6.46e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,2.61e-09,6;CL:0000677,2.61e-09,6;CL:0000584,2.61e-09,6;CL:0000066,1.82e-08,25;CL:0000075,7.92e-08,7;CL:0002563,1.59e-07,9;CL:0002251,1.59e-07,9;CL:0000223,8.92e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!6.03e-12!128;UBERON:0001555!6.03e-12!128;UBERON:0007026!6.03e-12!128;UBERON:0004119!1.62e-11!130;UBERON:0000925!1.62e-11!130;UBERON:0006595!1.62e-11!130;UBERON:0004921!5.10e-11!126;UBERON:0004185!5.10e-11!126;UBERON:0000160!1.19e-09!43;UBERON:0000344!2.99e-09!15;UBERON:0009854!9.24e-09!23;UBERON:0009856!9.24e-09!23;UBERON:0002365!1.68e-08!25;UBERON:0002330!1.68e-08!25;UBERON:0002107!2.98e-08!22;UBERON:0007499!2.98e-08!22;UBERON:0006925!2.98e-08!22;UBERON:0009497!2.98e-08!22;UBERON:0000015!2.98e-08!22;UBERON:0002423!2.98e-08!22;UBERON:0006235!2.98e-08!22;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0004161!2.98e-08!22;UBERON:0008836!2.98e-08!22;UBERON:0001242!4.67e-08!13;UBERON:0000060!4.67e-08!13;UBERON:0001262!4.67e-08!13;UBERON:0004786!4.67e-08!13;UBERON:0005409!1.45e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.25e-25,31;UBERON:0001007,1.32e-22,116;UBERON:0001555,1.32e-22,116;UBERON:0007026,1.32e-22,116;UBERON:0004119,5.47e-22,118;UBERON:0000925,5.47e-22,118;UBERON:0006595,5.47e-22,118;UBERON:0005409,6.19e-22,47;UBERON:0004921,1.27e-20,114;UBERON:0000344,2.15e-15,15;UBERON:0001242,7.53e-13,13;UBERON:0001262,7.53e-13,13;UBERON:0004786,7.53e-13,13;UBERON:0009854,1.38e-10,23;UBERON:0009856,1.38e-10,23;UBERON:0002107,1.26e-09,22;UBERON:0007499,1.26e-09,22;UBERON:0006925,1.26e-09,22;UBERON:0009497,1.26e-09,22;UBERON:0000015,1.26e-09,22;UBERON:0002423,1.26e-09,22;UBERON:0006235,1.26e-09,22;UBERON:0008835,1.26e-09,22;UBERON:0003894,1.26e-09,22;UBERON:0004161,1.26e-09,22;UBERON:0008836,1.26e-09,22;UBERON:0011216,1.78e-08,194;UBERON:0004923,2.86e-08,24;UBERON:0002365,4.74e-08,25;UBERON:0002330,4.74e-08,25;UBERON:0003350,1.59e-07,9;UBERON:0004808,1.59e-07,9;UBERON:0001277,1.59e-07,9;UBERON:0002108,2.86e-07,4;UBERON:0003929,3.33e-07,55|phase1_expression=0.80074423552397,3.48975407639361,5.45999087267443,13.3084252975005,9.5170188689806,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.510259740906419,0,0,2.87986361028132,2.75291137280604,2.8711598205751,3.01533397311352,1.29282739611533,8.17100703662408,8.06496415231778,1.77384408524244,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,2.34717403304412,0.436050312760893,0,0.58328969722285,0.839918529752175,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0.633831403506179,0,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0,0.768436610643109,0,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0.395658863190582,0.548925861614458,0,0,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,2.719885334831,3.2382191498269,1.29955283489534,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,1.68353484709179,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,4.62586296177317,0.793351699990633,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.14135375667535,6.64340686162316,4.77626968699632,2.5133520880027,3.18330355265841,2.53453313254856,3.59527763461689,2.37751854862164,2.78797782556114,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.590440591918409,0.156998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.196558995113203,0.674586337154561,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,1.37280706594041,4.31304619582064,1.11642284300551,3.43241440426017,2.52578877947112,1.97337154874103,3.37710464954357,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20969 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P18828 | |||
|association_with_transcript=-260bp_to_ENSMUST00000020911_5end | |||
|cluster_id=chr12:8777846..8777868,+ | |||
|description=CAGE_peak_6_at_Sdc1_5end | |||
|id=chr12:8777846..8777868,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.46e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.61e-09,6;CL:0000677,2.61e-09,6;CL:0000584,2.61e-09,6;CL:0000066,1.82e-08,25;CL:0000075,7.92e-08,7;CL:0002563,1.59e-07,9;CL:0002251,1.59e-07,9;CL:0000223,8.92e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!6.03e-12!128;UBERON:0001555!6.03e-12!128;UBERON:0007026!6.03e-12!128;UBERON:0004119!1.62e-11!130;UBERON:0000925!1.62e-11!130;UBERON:0006595!1.62e-11!130;UBERON:0004921!5.10e-11!126;UBERON:0004185!5.10e-11!126;UBERON:0000160!1.19e-09!43;UBERON:0000344!2.99e-09!15;UBERON:0009854!9.24e-09!23;UBERON:0009856!9.24e-09!23;UBERON:0002365!1.68e-08!25;UBERON:0002330!1.68e-08!25;UBERON:0002107!2.98e-08!22;UBERON:0007499!2.98e-08!22;UBERON:0006925!2.98e-08!22;UBERON:0009497!2.98e-08!22;UBERON:0000015!2.98e-08!22;UBERON:0002423!2.98e-08!22;UBERON:0006235!2.98e-08!22;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0004161!2.98e-08!22;UBERON:0008836!2.98e-08!22;UBERON:0001242!4.67e-08!13;UBERON:0000060!4.67e-08!13;UBERON:0001262!4.67e-08!13;UBERON:0004786!4.67e-08!13;UBERON:0005409!1.45e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.25e-25,31;UBERON:0001007,1.32e-22,116;UBERON:0001555,1.32e-22,116;UBERON:0007026,1.32e-22,116;UBERON:0004119,5.47e-22,118;UBERON:0000925,5.47e-22,118;UBERON:0006595,5.47e-22,118;UBERON:0005409,6.19e-22,47;UBERON:0004921,1.27e-20,114;UBERON:0000344,2.15e-15,15;UBERON:0001242,7.53e-13,13;UBERON:0001262,7.53e-13,13;UBERON:0004786,7.53e-13,13;UBERON:0009854,1.38e-10,23;UBERON:0009856,1.38e-10,23;UBERON:0002107,1.26e-09,22;UBERON:0007499,1.26e-09,22;UBERON:0006925,1.26e-09,22;UBERON:0009497,1.26e-09,22;UBERON:0000015,1.26e-09,22;UBERON:0002423,1.26e-09,22;UBERON:0006235,1.26e-09,22;UBERON:0008835,1.26e-09,22;UBERON:0003894,1.26e-09,22;UBERON:0004161,1.26e-09,22;UBERON:0008836,1.26e-09,22;UBERON:0011216,1.78e-08,194;UBERON:0004923,2.86e-08,24;UBERON:0002365,4.74e-08,25;UBERON:0002330,4.74e-08,25;UBERON:0003350,1.59e-07,9;UBERON:0004808,1.59e-07,9;UBERON:0001277,1.59e-07,9;UBERON:0002108,2.86e-07,4;UBERON:0003929,3.33e-07,55 | |||
|phase1_expression=0.80074423552397,3.48975407639361,5.45999087267443,13.3084252975005,9.5170188689806,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.510259740906419,0,0,2.87986361028132,2.75291137280604,2.8711598205751,3.01533397311352,1.29282739611533,8.17100703662408,8.06496415231778,1.77384408524244,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,2.34717403304412,0.436050312760893,0,0.58328969722285,0.839918529752175,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0.633831403506179,0,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0,0.768436610643109,0,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0.395658863190582,0.548925861614458,0,0,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,2.719885334831,3.2382191498269,1.29955283489534,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,1.68353484709179,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,4.62586296177317,0.793351699990633,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.14135375667535,6.64340686162316,4.77626968699632,2.5133520880027,3.18330355265841,2.53453313254856,3.59527763461689,2.37751854862164,2.78797782556114,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.590440591918409,0.156998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.196558995113203,0.674586337154561,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,1.37280706594041,4.31304619582064,1.11642284300551,3.43241440426017,2.52578877947112,1.97337154874103,3.37710464954357,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.952174563544055,1.17080188714679,0.315270288212382,1.32878813789265,1.11618338060241,0,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.488660878060728,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0,0,0,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.658196082408484,1.2178597964584,0,0.21183207086382,1.7642271844397,0,0.161464426695906,0.120625849856312,0,0.656563598980245,6.12109756922687,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,0,0.324016022465404,0,0.436725127492355,1.21377911746339,1.48776220305605,1.30877970992015,2.59229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0.167884616364078,1.73870634628971,0,0.36630324853453,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.0640251524048693,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0,0.593175090620871,0.197008964751127,1.22769312950907,0.619747364743864,0,0,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p6@Sdc1 | |||
}} |
Revision as of 10:30, 5 August 2015
Short description: | p6@Sdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -260bp_to_ENSMUST00000020911_5end |
EntrezGene: | 20969 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.61e-09 | 6 |
gut absorptive cell | 2.61e-09 | 6 |
enterocyte | 2.61e-09 | 6 |
epithelial cell | 1.82e-08 | 25 |
columnar/cuboidal epithelial cell | 7.92e-08 | 7 |
intestinal epithelial cell | 1.59e-07 | 9 |
epithelial cell of alimentary canal | 1.59e-07 | 9 |
endodermal cell | 8.92e-07 | 20 |