FFCP PHASE1:Hg19::chr4:90857427..90857438,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr4:90857427..90857438,+ | |||
|id=chr4:90857427..90857438,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.29e-68!24;CL:0000115!1.18e-49!35;CL:0000071!3.49e-46!18;CL:0002546!3.49e-46!18;CL:0002078!2.65e-38!44;CL:0000213!3.01e-28!57;CL:0000215!3.01e-28!57;CL:1000413!5.72e-27!9;CL:0005020!4.69e-24!6;CL:0002138!4.69e-24!6;CL:0005022!4.69e-24!6;CL:0002544!2.38e-16!6;CL:0002144!7.46e-13!3;CL:0002618!1.24e-12!3;CL:0000076!8.24e-11!62;CL:0002543!9.11e-11!6;CL:0000222!1.20e-10!119;CL:0002545!7.12e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.70e-63;6!CL:0002139;2.17e-62;24!CL:0000115;8.84e-32;36!CL:0002078;2.56e-25;45!CL:0002144;2.66e-21;3!CL:0000071;3.37e-21;18!CL:0000213;9.10e-16;58!CL:0000215;9.10e-16;58!CL:1000413;9.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.87e-63,6;CL:0002138,2.87e-63,6;CL:0005022,2.87e-63,6;CL:0002139,1.86e-62,24;CL:0000115,1.98e-41,36;CL:0002078,5.28e-33,45;CL:0000213,1.94e-25,58;CL:0000215,1.94e-25,58;CL:0002144,9.47e-22,3;CL:0000071,2.56e-21,18;CL:0002546,2.56e-21,18;CL:0000222,9.81e-12,121;CL:1000413,1.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;1.70e-63;6!CL:0002546;3.37e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.49e-46!18;UBERON:0004638!3.49e-46!18;UBERON:0004852!3.49e-46!18;UBERON:0000487!4.23e-37!22;UBERON:0006914!3.40e-32!25;UBERON:0003915!5.72e-27!9;UBERON:0004700!5.72e-27!9;UBERON:0001917!5.72e-27!9;UBERON:0000055!3.51e-20!69;UBERON:0002465!6.14e-19!10;UBERON:0001473!7.24e-18!8;UBERON:0004536!7.24e-18!8;UBERON:0006558!7.24e-18!8;UBERON:0002049!5.99e-17!79;UBERON:0007798!5.99e-17!79;UBERON:0004535!1.39e-14!110;UBERON:0001009!4.86e-14!113;UBERON:0001915!7.46e-13!3;UBERON:0001982!7.46e-13!3;UBERON:0001981!2.75e-11!60;UBERON:0007500!2.75e-11!60;UBERON:0004537!2.75e-11!60;UBERON:0006965!2.75e-11!60;UBERON:0005800!7.12e-09!2;UBERON:0001515!7.12e-09!2;UBERON:0004872!3.69e-08!84;UBERON:0002066!9.75e-08!5;UBERON:0001638!3.54e-07!9;UBERON:0003920!3.54e-07!9;UBERON:0004582!3.54e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.05e-47;8!UBERON:0004536;1.05e-47;8!UBERON:0006558;1.05e-47;8!UBERON:0002465;3.21e-38;10!UBERON:0010523;2.66e-21;3!UBERON:0001915;2.66e-21;3!UBERON:0001982;2.66e-21;3!UBERON:0004638;3.37e-21;18!UBERON:0001986;3.37e-21;18!UBERON:0004852;3.37e-21;18!UBERON:0000055;1.36e-17;65!UBERON:0000487;2.29e-17;22!UBERON:0005795;1.31e-16;1!UBERON:0006914;2.71e-15;25!UBERON:0002405;3.04e-14;27!UBERON:0000490;4.97e-11;33!UBERON:0002193;5.53e-10;42!UBERON:0002049;2.18e-09;75!UBERON:0007798;2.18e-09;75!UBERON:0003915;9.84e-08;9!UBERON:0004700;9.84e-08;9!UBERON:0001917;9.84e-08;9!UBERON:0004535;1.25e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.55e-47,8;UBERON:0004536,1.55e-47,8;UBERON:0006558,1.55e-47,8;UBERON:0002465,4.38e-38,10;UBERON:0010523,9.47e-22,3;UBERON:0001915,9.47e-22,3;UBERON:0001982,9.47e-22,3;UBERON:0000055,1.40e-21,68;UBERON:0004638,2.56e-21,18;UBERON:0001986,2.56e-21,18;UBERON:0004852,2.56e-21,18;UBERON:0002049,1.05e-18,78;UBERON:0007798,1.05e-18,78;UBERON:0000487,1.84e-17,22;UBERON:0004535,5.61e-16,109;UBERON:0001009,1.60e-15,112;UBERON:0006914,2.23e-15,25;UBERON:0003915,1.17e-07,9;UBERON:0004700,1.17e-07,9;UBERON:0001917,1.17e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,1.13061588384802,0.838998872419812,0.550236083880135,1.04497483268405,1.03366703667732,1.42306505074684,1.00416183829401,0.402829317109147,1.52054421143703,1.46437234528902,0.735326160691737,0.81014194788176,1.25019619597712,0.673588117878509,0.788280363383256,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,1.38895653772983,2.28304982681518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.846694330895531,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0.784901281975124,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr4:90857427..90857438,+ | |||
}} |
Revision as of 02:17, 22 January 2014
Short description: | p@chr4:90857427..90857438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:90857427..90857438, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.87e-63 | 6 |
endothelial cell of lymphatic vessel | 2.87e-63 | 6 |
vascular lymphangioblast | 2.87e-63 | 6 |
endothelial cell of vascular tree | 1.86e-62 | 24 |
endothelial cell | 1.98e-41 | 36 |
meso-epithelial cell | 5.28e-33 | 45 |
lining cell | 1.94e-25 | 58 |
barrier cell | 1.94e-25 | 58 |
capillary endothelial cell | 9.47e-22 | 3 |
blood vessel endothelial cell | 2.56e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.56e-21 | 18 |
mesodermal cell | 9.81e-12 | 121 |
endothelial cell of artery | 1.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.55e-47 | 8 |
lymph vasculature | 1.55e-47 | 8 |
lymphatic part of lymphoid system | 1.55e-47 | 8 |
lymphoid system | 4.38e-38 | 10 |
microcirculatory vessel | 9.47e-22 | 3 |
endothelium of capillary | 9.47e-22 | 3 |
capillary | 9.47e-22 | 3 |
vessel | 1.40e-21 | 68 |
blood vessel endothelium | 2.56e-21 | 18 |
endothelium | 2.56e-21 | 18 |
cardiovascular system endothelium | 2.56e-21 | 18 |
vasculature | 1.05e-18 | 78 |
vascular system | 1.05e-18 | 78 |
simple squamous epithelium | 1.84e-17 | 22 |
cardiovascular system | 5.61e-16 | 109 |
circulatory system | 1.60e-15 | 112 |
squamous epithelium | 2.23e-15 | 25 |
endothelial tube | 1.17e-07 | 9 |
arterial system endothelium | 1.17e-07 | 9 |
endothelium of artery | 1.17e-07 | 9 |