FFCP PHASE1:Mm9::chr16:7069890..7069905,+: Difference between revisions
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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=35|UniProt=Q9JJ43|association_with_transcript=-22bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end|description=CAGE_peak_11_at_Rbfox1_5end|id=chr16:7069890..7069905,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!2.90e-07!5;UBERON:0002472!2.90e-07!5;UBERON:0008784!2.90e-07!5;UBERON:0006058!2.90e-07!5;UBERON:0004709!2.90e-07!5;UBERON:0005420!2.90e-07!5;UBERON:0006057!2.90e-07!5;UBERON:0000978!2.90e-07!5;UBERON:0002103!2.90e-07!5;UBERON:0000376!2.90e-07!5;UBERON:0000154!2.90e-07!5;UBERON:0005730!2.90e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.41e-08,5;UBERON:0002472,7.41e-08,5;UBERON:0008784,7.41e-08,5;UBERON:0006058,7.41e-08,5;UBERON:0004709,7.41e-08,5;UBERON:0002529,7.41e-08,5;UBERON:0010538,7.41e-08,5;UBERON:0005420,7.41e-08,5;UBERON:0010758,7.41e-08,5;UBERON:0000978,7.41e-08,5;UBERON:0002103,7.41e-08,5;UBERON:0000376,7.41e-08,5;UBERON:0000154,7.41e-08,5;UBERON:0010709,7.41e-08,5;UBERON:0005730,7.41e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,3.558870698843,4.41683036920787,3.39412677194655,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,1.24406970610093,0,1.26265113531884,0,0,0.360124259610698,1.05493372485001,0.204109497453984,0.512454881139399,0.468508622798644,1.03481348295606,0,0.567318240503458,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.822799249567402,3.61168420974009,4.45878452502207,6.87139940899062,3.73235195994786,6.1734952629771,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,12.876017287423,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4732937941222,0.161464426695906,0.603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59227005632079,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,8.84248496099324,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,1.28367683836726,1.51618327058278,2.28131369901216,1.69763707247469,1.68554713445788,1.79270426733634,2.06767688240208,1.42888107384922,1.39061191133827,1.73618298417335,1.23625770240992,2.35518272215036,1.02860775715625,0.354951612318675,1.90748951957857,1.0174249164263,1.69396884747595,1.26921911837515,2.19513567447327,1.57841826862706,0.814824683075171,2.24456908663095,0.711810108745045,1.47756723563345,0.818462086339379,1.70430525304563,1.15743966588685,0.749431733813838,0.467863216890817,1.07435527024149,2.48674831689496,3.97064554415128,3.2461496986859|short_description=p11@Rbfox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268859 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJ43 | |||
|association_with_transcript=-22bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end | |||
|cluster_id=chr16:7069890..7069905,+ | |||
|description=CAGE_peak_11_at_Rbfox1_5end | |||
|id=chr16:7069890..7069905,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!2.90e-07!5;UBERON:0002472!2.90e-07!5;UBERON:0008784!2.90e-07!5;UBERON:0006058!2.90e-07!5;UBERON:0004709!2.90e-07!5;UBERON:0005420!2.90e-07!5;UBERON:0006057!2.90e-07!5;UBERON:0000978!2.90e-07!5;UBERON:0002103!2.90e-07!5;UBERON:0000376!2.90e-07!5;UBERON:0000154!2.90e-07!5;UBERON:0005730!2.90e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.41e-08,5;UBERON:0002472,7.41e-08,5;UBERON:0008784,7.41e-08,5;UBERON:0006058,7.41e-08,5;UBERON:0004709,7.41e-08,5;UBERON:0002529,7.41e-08,5;UBERON:0010538,7.41e-08,5;UBERON:0005420,7.41e-08,5;UBERON:0010758,7.41e-08,5;UBERON:0000978,7.41e-08,5;UBERON:0002103,7.41e-08,5;UBERON:0000376,7.41e-08,5;UBERON:0000154,7.41e-08,5;UBERON:0010709,7.41e-08,5;UBERON:0005730,7.41e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,3.558870698843,4.41683036920787,3.39412677194655,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,1.24406970610093,0,1.26265113531884,0,0,0.360124259610698,1.05493372485001,0.204109497453984,0.512454881139399,0.468508622798644,1.03481348295606,0,0.567318240503458,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.822799249567402,3.61168420974009,4.45878452502207,6.87139940899062,3.73235195994786,6.1734952629771,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,12.876017287423,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4732937941222,0.161464426695906,0.603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59227005632079,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,8.84248496099324,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,1.28367683836726,1.51618327058278,2.28131369901216,1.69763707247469,1.68554713445788,1.79270426733634,2.06767688240208,1.42888107384922,1.39061191133827,1.73618298417335,1.23625770240992,2.35518272215036,1.02860775715625,0.354951612318675,1.90748951957857,1.0174249164263,1.69396884747595,1.26921911837515,2.19513567447327,1.57841826862706,0.814824683075171,2.24456908663095,0.711810108745045,1.47756723563345,0.818462086339379,1.70430525304563,1.15743966588685,0.749431733813838,0.467863216890817,1.07435527024149,2.48674831689496,3.97064554415128,3.2461496986859 | |||
|short_description=p11@Rbfox1 | |||
}} |
Revision as of 01:11, 4 August 2015
Short description: | p11@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | -22bp_to_ENSMUST00000056416, ENSMUST00000092375, ENSMUST00000096292, ENSMUST00000170095, NM_183188, uc007ycf.2, uc007ycg.2, uc007ych.2_5end |
EntrezGene: | 268859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.41e-08 | 5 |
stylopod | 7.41e-08 | 5 |
lower limb segment | 7.41e-08 | 5 |
multi-limb segment region | 7.41e-08 | 5 |
pelvic appendage | 7.41e-08 | 5 |
limb segment | 7.41e-08 | 5 |
paired limb/fin segment | 7.41e-08 | 5 |
pelvic appendage bud | 7.41e-08 | 5 |
subdivision of organism along appendicular axis | 7.41e-08 | 5 |
leg | 7.41e-08 | 5 |
hindlimb | 7.41e-08 | 5 |
hindlimb stylopod | 7.41e-08 | 5 |
posterior region of body | 7.41e-08 | 5 |
pelvic complex | 7.41e-08 | 5 |
hindlimb/pelvic fin field | 7.41e-08 | 5 |