FFCP PHASE1:Mm9::chr17:32795989..32796003,+: Difference between revisions
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{{FFCP|EntrezGene=631304|HGNC=|MCL_coexpression_id=126|UniProt=G3UW81|association_with_transcript=-351bp_to_ENSMUST00000165061_5end|description=CAGE_peak_3_at_Cyp4f40_5end|id=chr17:32795989..32796003,+|ontology_enrichment_celltype=CL:0002563!4.63e-17!9;CL:0002251!4.63e-17!9;CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002076!1.81e-09!15;CL:0000066!2.87e-09!25;CL:0000473!6.18e-07!3;CL:0000627!6.18e-07!3;CL:0000682!6.18e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,4.92e-25,9;CL:0002251,4.92e-25,9;CL:0000239,6.75e-18,6;CL:0000677,6.75e-18,6;CL:0000584,6.75e-18,6;CL:0000075,2.95e-15,7;CL:0000066,9.44e-15,25;CL:0002076,2.00e-14,15;CL:0000223,1.91e-10,20;CL:0000682,1.05e-09,3;CL:0002250,1.01e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.22e-31!43;UBERON:0000344!8.35e-29!15;UBERON:0005409!7.17e-28!59;UBERON:0001242!4.40e-25!13;UBERON:0000060!4.40e-25!13;UBERON:0001262!4.40e-25!13;UBERON:0004786!4.40e-25!13;UBERON:0003350!4.63e-17!9;UBERON:0004808!4.63e-17!9;UBERON:0001277!4.63e-17!9;UBERON:0004923!1.76e-16!24;UBERON:0000485!1.32e-13!11;UBERON:0001007!2.63e-10!128;UBERON:0001555!2.63e-10!128;UBERON:0007026!2.63e-10!128;UBERON:0004119!5.09e-10!130;UBERON:0000925!5.09e-10!130;UBERON:0006595!5.09e-10!130;UBERON:0004921!9.14e-09!126;UBERON:0004185!9.14e-09!126;UBERON:0000331!8.96e-08!3;UBERON:0002116!8.96e-08!3;UBERON:0001204!8.96e-08!3;UBERON:0001168!8.96e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-47,31;UBERON:0000344,6.95e-43,15;UBERON:0001242,3.17e-37,13;UBERON:0001262,3.17e-37,13;UBERON:0004786,3.17e-37,13;UBERON:0005409,7.38e-33,47;UBERON:0004923,1.26e-25,24;UBERON:0003350,4.92e-25,9;UBERON:0004808,4.92e-25,9;UBERON:0001277,4.92e-25,9;UBERON:0000485,3.25e-20,11;UBERON:0002108,1.91e-13,4;UBERON:0001007,6.58e-13,116;UBERON:0001555,6.58e-13,116;UBERON:0007026,6.58e-13,116;UBERON:0004119,1.33e-12,118;UBERON:0000925,1.33e-12,118;UBERON:0006595,1.33e-12,118;UBERON:0000331,5.72e-11,3;UBERON:0002116,5.72e-11,3;UBERON:0001204,5.72e-11,3;UBERON:0001168,5.72e-11,3;UBERON:0004921,1.04e-10,114;UBERON:0001962,4.47e-07,2;UBERON:0001961,4.47e-07,2;UBERON:0001744,4.47e-07,2;UBERON:0001155,5.13e-07,2;UBERON:0000059,5.13e-07,2|phase1_expression=0,6.2815573375085,6.3699893514535,6.65421264875026,5.50985302940982,3.69334398206158,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,4.12936705920906,2.8711598205751,5.1691439539089,7.54149314400612,25.4631382071541,23.9428623271934,12.1951780860418,0,0,0,1.1554064790051,1.99481574430191,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.96675849995316,0,0,0.257734922644187,1.00841762311671,0.444756087689741,0.570676878337677,9.49058123089023,0,1.75934646160189,0.795825888164603,0.974820435595601,5.39291645192533,9.51007419448655,7.16908583715722,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0,0.269728692769641,0,0,8.55458823725833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p3@Cyp4f40}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:631304 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UW81 | |||
|association_with_transcript=-351bp_to_ENSMUST00000165061_5end | |||
|cluster_id=chr17:32795989..32796003,+ | |||
|description=CAGE_peak_3_at_Cyp4f40_5end | |||
|id=chr17:32795989..32796003,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.63e-17!9;CL:0002251!4.63e-17!9;CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002076!1.81e-09!15;CL:0000066!2.87e-09!25;CL:0000473!6.18e-07!3;CL:0000627!6.18e-07!3;CL:0000682!6.18e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.92e-25,9;CL:0002251,4.92e-25,9;CL:0000239,6.75e-18,6;CL:0000677,6.75e-18,6;CL:0000584,6.75e-18,6;CL:0000075,2.95e-15,7;CL:0000066,9.44e-15,25;CL:0002076,2.00e-14,15;CL:0000223,1.91e-10,20;CL:0000682,1.05e-09,3;CL:0002250,1.01e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.22e-31!43;UBERON:0000344!8.35e-29!15;UBERON:0005409!7.17e-28!59;UBERON:0001242!4.40e-25!13;UBERON:0000060!4.40e-25!13;UBERON:0001262!4.40e-25!13;UBERON:0004786!4.40e-25!13;UBERON:0003350!4.63e-17!9;UBERON:0004808!4.63e-17!9;UBERON:0001277!4.63e-17!9;UBERON:0004923!1.76e-16!24;UBERON:0000485!1.32e-13!11;UBERON:0001007!2.63e-10!128;UBERON:0001555!2.63e-10!128;UBERON:0007026!2.63e-10!128;UBERON:0004119!5.09e-10!130;UBERON:0000925!5.09e-10!130;UBERON:0006595!5.09e-10!130;UBERON:0004921!9.14e-09!126;UBERON:0004185!9.14e-09!126;UBERON:0000331!8.96e-08!3;UBERON:0002116!8.96e-08!3;UBERON:0001204!8.96e-08!3;UBERON:0001168!8.96e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-47,31;UBERON:0000344,6.95e-43,15;UBERON:0001242,3.17e-37,13;UBERON:0001262,3.17e-37,13;UBERON:0004786,3.17e-37,13;UBERON:0005409,7.38e-33,47;UBERON:0004923,1.26e-25,24;UBERON:0003350,4.92e-25,9;UBERON:0004808,4.92e-25,9;UBERON:0001277,4.92e-25,9;UBERON:0000485,3.25e-20,11;UBERON:0002108,1.91e-13,4;UBERON:0001007,6.58e-13,116;UBERON:0001555,6.58e-13,116;UBERON:0007026,6.58e-13,116;UBERON:0004119,1.33e-12,118;UBERON:0000925,1.33e-12,118;UBERON:0006595,1.33e-12,118;UBERON:0000331,5.72e-11,3;UBERON:0002116,5.72e-11,3;UBERON:0001204,5.72e-11,3;UBERON:0001168,5.72e-11,3;UBERON:0004921,1.04e-10,114;UBERON:0001962,4.47e-07,2;UBERON:0001961,4.47e-07,2;UBERON:0001744,4.47e-07,2;UBERON:0001155,5.13e-07,2;UBERON:0000059,5.13e-07,2 | |||
|phase1_expression=0,6.2815573375085,6.3699893514535,6.65421264875026,5.50985302940982,3.69334398206158,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,4.12936705920906,2.8711598205751,5.1691439539089,7.54149314400612,25.4631382071541,23.9428623271934,12.1951780860418,0,0,0,1.1554064790051,1.99481574430191,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.96675849995316,0,0,0.257734922644187,1.00841762311671,0.444756087689741,0.570676878337677,9.49058123089023,0,1.75934646160189,0.795825888164603,0.974820435595601,5.39291645192533,9.51007419448655,7.16908583715722,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0,0.269728692769641,0,0,8.55458823725833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Cyp4f40 | |||
}} |
Revision as of 15:24, 4 August 2015
Short description: | p3@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -351bp_to_ENSMUST00000165061_5end |
EntrezGene: | 631304 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.92e-25 | 9 |
epithelial cell of alimentary canal | 4.92e-25 | 9 |
brush border epithelial cell | 6.75e-18 | 6 |
gut absorptive cell | 6.75e-18 | 6 |
enterocyte | 6.75e-18 | 6 |
columnar/cuboidal epithelial cell | 2.95e-15 | 7 |
epithelial cell | 9.44e-15 | 25 |
endo-epithelial cell | 2.00e-14 | 15 |
endodermal cell | 1.91e-10 | 20 |
M cell of gut | 1.05e-09 | 3 |
intestinal crypt stem cell | 1.01e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.62e-47 | 31 |
mucosa | 6.95e-43 | 15 |
intestinal mucosa | 3.17e-37 | 13 |
wall of intestine | 3.17e-37 | 13 |
gastrointestinal system mucosa | 3.17e-37 | 13 |
gastrointestinal system | 7.38e-33 | 47 |
organ component layer | 1.26e-25 | 24 |
epithelium of mucosa | 4.92e-25 | 9 |
gastrointestinal system epithelium | 4.92e-25 | 9 |
intestinal epithelium | 4.92e-25 | 9 |
simple columnar epithelium | 3.25e-20 | 11 |
small intestine | 1.91e-13 | 4 |
digestive system | 6.58e-13 | 116 |
digestive tract | 6.58e-13 | 116 |
primitive gut | 6.58e-13 | 116 |
endoderm-derived structure | 1.33e-12 | 118 |
endoderm | 1.33e-12 | 118 |
presumptive endoderm | 1.33e-12 | 118 |
ileal mucosa | 5.72e-11 | 3 |
ileum | 5.72e-11 | 3 |
mucosa of small intestine | 5.72e-11 | 3 |
wall of small intestine | 5.72e-11 | 3 |
subdivision of digestive tract | 1.04e-10 | 114 |
gut-associated lymphoid tissue | 4.47e-07 | 2 |
mucosa-associated lymphoid tissue | 4.47e-07 | 2 |
lymphoid tissue | 4.47e-07 | 2 |
colon | 5.13e-07 | 2 |
large intestine | 5.13e-07 | 2 |