FFCP PHASE1:Hg19::chr5:81654563..81654582,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:81654563..81654582,+ | |||
|id=chr5:81654563..81654582,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.93e-07!12;CL:0000569!3.66e-07!4;CL:0000011!3.66e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.32e-18;55!CL:0000048;7.79e-18;58!CL:0000723;6.33e-16;61!CL:0000034;3.49e-14;69!CL:0002568;6.24e-14;1!CL:0000569;1.52e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,5.85e-14,1;CL:0000569,1.62e-13,4;CL:0000011,1.62e-13,4;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000011;1.52e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!5.15e-24!14;DOID:120!3.96e-11!27;DOID:193!3.52e-10!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.24e-70;14!DOID:120;2.94e-36;27!DOID:193;1.06e-33;29!DOID:5662;3.98e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.75e-71,14;DOID:120,2.60e-36,27;DOID:193,9.47e-34,29;DOID:5662,3.98e-14,1;DOID:0050686,8.37e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000992!3.00e-17!13;UBERON:0002118!3.58e-15!5;UBERON:0004532!3.58e-15!5;UBERON:0002119!2.21e-12!4;UBERON:0004531!2.21e-12!4;UBERON:0000991!6.43e-10!21;UBERON:0009196!6.43e-10!21;UBERON:0009117!6.43e-10!21;UBERON:0005564!6.43e-10!21;UBERON:0004176!2.22e-09!22;UBERON:0002323!6.62e-09!46;UBERON:0004458!3.72e-08!49;UBERON:0002081!9.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;4.78e-46;13!UBERON:0002118;5.29e-40;5!UBERON:0002119;1.99e-28;4!UBERON:0000991;2.32e-28;21!UBERON:0003134;2.63e-15;33!UBERON:0003100;3.89e-12;41!UBERON:0000474;6.21e-11;37!UBERON:0003133;5.89e-10;44!UBERON:0004458;4.13e-09;48!UBERON:0002323;3.16e-08;45!UBERON:0002553;7.14e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.91e-46,13;UBERON:0002118,3.91e-40,5;UBERON:0002119,1.99e-28,4;UBERON:0000991,2.05e-28,21;UBERON:0009196,2.05e-28,21;UBERON:0009117,2.05e-28,21;UBERON:0005564,2.05e-28,21;UBERON:0004176,4.20e-27,22;UBERON:0002323,1.91e-16,46;UBERON:0003134,6.42e-16,37;UBERON:0000474,6.42e-16,37;UBERON:0004458,2.16e-15,49;UBERON:0003100,2.59e-14,41;UBERON:0003886,6.77e-14,54;UBERON:0002553,3.28e-12,61;UBERON:0003133,3.82e-12,48;UBERON:0005156,9.02e-10,59;UBERON:0000990,9.02e-10,59;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39523833576444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.410635780069046,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.537101224341368,0.145016693914229,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.667852230137435,1.31843099381408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94031243752936,0.467426619694449,0,0,0,0,0,0.302461847526478,3.26418121223839,5.32278539962682,1.91156120596443,1.34940933649081,8.84998854194679,0.829412415681711,2.65841714557995,0,13.3729272007524,0,0.813741466409323,3.63697318405119,5.90758063733687,4.17630383890644,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,6.68803236805932,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:81654563..81654582,+ | |||
}} |
Revision as of 06:15, 22 January 2014
Short description: | p@chr5:81654563..81654582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:81654563..81654582, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 5.85e-14 | 1 |
cardiac mesenchymal cell | 1.62e-13 | 4 |
migratory trunk neural crest cell | 1.62e-13 | 4 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.91e-46 | 13 |
right ovary | 3.91e-40 | 5 |
left ovary | 1.99e-28 | 4 |
gonad | 2.05e-28 | 21 |
indifferent external genitalia | 2.05e-28 | 21 |
indifferent gonad | 2.05e-28 | 21 |
gonad primordium | 2.05e-28 | 21 |
external genitalia | 4.20e-27 | 22 |
body cavity | 1.91e-16 | 46 |
female reproductive organ | 6.42e-16 | 37 |
female reproductive system | 6.42e-16 | 37 |
body cavity or lining | 2.16e-15 | 49 |
female organism | 2.59e-14 | 41 |
body cavity precursor | 6.77e-14 | 54 |
anatomical cavity | 3.28e-12 | 61 |
reproductive organ | 3.82e-12 | 48 |
reproductive structure | 9.02e-10 | 59 |
reproductive system | 9.02e-10 | 59 |
connective tissue | 9.92e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.75e-71 | 14 |
female reproductive organ cancer | 2.60e-36 | 27 |
reproductive organ cancer | 9.47e-34 | 29 |
pleomorphic carcinoma | 3.98e-14 | 1 |
organ system cancer | 8.37e-08 | 137 |