FFCP PHASE1:Hg19::chr6:33266918..33266957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9769 | |||
|TSSclassifier=strong | |||
|UniProt=O15211 | |||
|association_with_transcript=143bp_to_ENST00000497454_5end | |||
|description=CAGE_peak_12_at_RGL2_5end | |||
|id=chr6:33266918..33266957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.04e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.34e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.48e-09;10!DOID:3095;1.50e-07;22!DOID:2994;1.50e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.81e-09,10;DOID:3095,1.56e-07,22;DOID:2994,1.56e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!3.23e-16!90;UBERON:0003075!4.44e-14!86;UBERON:0007284!4.44e-14!86;UBERON:0005743!5.20e-14!86;UBERON:0000073!7.73e-14!94;UBERON:0001016!7.73e-14!94;UBERON:0001049!3.72e-13!57;UBERON:0005068!3.72e-13!57;UBERON:0006241!3.72e-13!57;UBERON:0007135!3.72e-13!57;UBERON:0002616!6.76e-13!59;UBERON:0001017!1.05e-12!82;UBERON:0002020!4.28e-12!34;UBERON:0003528!4.28e-12!34;UBERON:0000955!6.01e-12!69;UBERON:0006238!6.01e-12!69;UBERON:0001893!6.78e-12!34;UBERON:0002791!1.43e-11!33;UBERON:0001869!4.05e-11!32;UBERON:0002780!7.41e-11!41;UBERON:0001890!7.41e-11!41;UBERON:0006240!7.41e-11!41;UBERON:0003056!7.97e-11!61;UBERON:0003080!3.04e-10!42;UBERON:0000924!2.31e-09!173;UBERON:0006601!2.31e-09!173;UBERON:0000153!3.64e-09!129;UBERON:0007811!3.64e-09!129;UBERON:0000956!5.69e-09!25;UBERON:0000203!5.69e-09!25;UBERON:0000033!2.22e-08!123;UBERON:0002619!3.66e-08!22;UBERON:0004121!5.21e-08!169;UBERON:0001950!1.38e-07!20;UBERON:0007023!8.37e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.61e-17;49!UBERON:0002346;1.69e-15;4!UBERON:0000923;1.69e-15;4!UBERON:0010316;1.69e-15;4!UBERON:0005291;1.69e-15;4!UBERON:0005383;1.52e-12;3!UBERON:0005382;1.52e-12;3!UBERON:0002050;2.02e-12;5!UBERON:0005423;2.02e-12;5!UBERON:0000369;1.62e-09;4!UBERON:0002435;1.62e-09;4!UBERON:0000204;1.62e-09;4!UBERON:0002370;1.34e-08;2!UBERON:0001873;1.34e-08;2!UBERON:0005058;1.34e-08;2!UBERON:0009113;1.34e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.18e-13,3;UBERON:0005382,3.18e-13,3;UBERON:0000369,5.10e-10,4;UBERON:0002435,5.10e-10,4;UBERON:0000204,5.10e-10,4;UBERON:0010082,5.10e-10,4;UBERON:0001873,2.92e-09,2;UBERON:0010122,2.92e-09,2;UBERON:0002346,8.48e-07,86 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0,1.25381888591235,0.572471974262113,0.547497700291537,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.154816123316076,0.919421224478927,0,0,0.309868802321207,0.426507697462265,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,1.5905718941022,0.486634870302636,0.567208902984407,0.443458794925128,0.43917392846563,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,1.12135520028461,0,0.24666754841716,0,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0.358779271377724,0.85422955527427,0.211931901159562,1.20036438433761,0.206105058476878,0.515281080091258,0.18611685633159,0,0.194874010322397,0,0.184099797284599,0.484938170456436,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0.975789649036763,0.397589304964456,1.39432731443422,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.462942225792648,0,0,0,0.579652024875384,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.317489471460845,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0.336393253036082,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.358121926479791,0.448340575974109,0.197030760201927,0.431255149719035,0.385029108839245,1.01637849688985,2.60279707715243,0,1.34013012267479,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.585707074963566,0,0,0,0.664225598535437,0.368738337083406,0,0.195801157462741,1.37257369524342,0,0,0.106727557803444,0,0,0,0.248107807818777,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,0.241718899183244,0,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0.261435451024901,1.53870075069834,0.328014645699706,0.650756789328606,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,1.06838442776085,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.371606350251437,0.721346064882224,0.426851060090485,0,0.199579371432817,0,0.211673582723883,0,0,0.456469358066384,0,0,0.50787533340481,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.293016358543788,2.54857095673978,0.445773537109913,0.568272293612826,0.47748896947538,0,0,0.994147647766298,0.562677665642051,0,0,0.844501632511974,0.19924798825107,0.552567831062295,0,0,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0.520855522170466,0.349839999984783,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0.694499979733169,1.77148277162768,1.80894657938112,3.05163472634166,0.774054819518572,0.591095237907095,0.658156191461918,0,0.139423744278603,0.538651809526579,0,0.46112780877612,0.807818799687949,0.108647371922008,0,0.09159759340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| |||
|short_description=p12@RGL2 | |||
}} |
Revision as of 11:24, 22 January 2014
Short description: | p12@RGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 143bp_to_ENST00000497454_5end |
EntrezGene: | RGL2 |
HGNC: | 9769 |
UniProt: | O15211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.18e-13 | 3 |
dorsal striatum | 3.18e-13 | 3 |
corpus striatum | 5.10e-10 | 4 |
striatum | 5.10e-10 | 4 |
ventral part of telencephalon | 5.10e-10 | 4 |
future corpus striatum | 5.10e-10 | 4 |
caudate nucleus | 2.92e-09 | 2 |
future caudate nucleus | 2.92e-09 | 2 |
neurectoderm | 8.48e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.81e-09 | 10 |
germ cell and embryonal cancer | 1.56e-07 | 22 |
germ cell cancer | 1.56e-07 | 22 |