FFCP PHASE1:Mm9::chr2:52190702..52190720,-: Difference between revisions
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{{FFCP|EntrezGene=17996|HGNC=|MCL_coexpression_id=14|UniProt=A2AQA9|association_with_transcript=-48bp_to_ENSMUST00000075301_5end|description=CAGE_peak_3_at_Neb_5end|id=chr2:52190702..52190720,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.85e-09,5;UBERON:0002472,3.85e-09,5;UBERON:0008784,3.85e-09,5;UBERON:0006058,3.85e-09,5;UBERON:0004709,3.85e-09,5;UBERON:0002529,3.85e-09,5;UBERON:0010538,3.85e-09,5;UBERON:0005420,3.85e-09,5;UBERON:0010758,3.85e-09,5;UBERON:0000978,3.85e-09,5;UBERON:0002103,3.85e-09,5;UBERON:0000376,3.85e-09,5;UBERON:0000154,3.85e-09,5;UBERON:0010709,3.85e-09,5;UBERON:0005730,3.85e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,3.558870698843,1.32504911076236,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,11.6136626514012,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.968786560175433,0.422190474497091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,1.77797382241292,2.26638562962784,1.28367683836726,0.505394423527595,2.28131369901216,2.26351609663291,1.31098110457835,1.21647789569252,1.78049953762401,1.42888107384922,1.50649623728312,1.15745532278223,2.47251540481984,1.03039244094078,2.05721551431249,1.95223386775271,1.43061713968393,1.30811774969096,1.2234219453993,0.930760686808441,2.0122077016005,0.789209134313529,1.90125759384206,1.68342681497322,1.30498519936592,1.18205378850676,1.22769312950907,1.85924209423159,1.15743966588685,0.249810577937946,0.701794825336225,2.14871054048298,2.86932498103265,1.10295709559758,2.55054619182464|short_description=p3@Neb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17996 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AQA9 | |||
|association_with_transcript=-48bp_to_ENSMUST00000075301_5end | |||
|cluster_id=chr2:52190702..52190720,- | |||
|description=CAGE_peak_3_at_Neb_5end | |||
|id=chr2:52190702..52190720,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.85e-09,5;UBERON:0002472,3.85e-09,5;UBERON:0008784,3.85e-09,5;UBERON:0006058,3.85e-09,5;UBERON:0004709,3.85e-09,5;UBERON:0002529,3.85e-09,5;UBERON:0010538,3.85e-09,5;UBERON:0005420,3.85e-09,5;UBERON:0010758,3.85e-09,5;UBERON:0000978,3.85e-09,5;UBERON:0002103,3.85e-09,5;UBERON:0000376,3.85e-09,5;UBERON:0000154,3.85e-09,5;UBERON:0010709,3.85e-09,5;UBERON:0005730,3.85e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,3.558870698843,1.32504911076236,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,11.6136626514012,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.968786560175433,0.422190474497091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,1.77797382241292,2.26638562962784,1.28367683836726,0.505394423527595,2.28131369901216,2.26351609663291,1.31098110457835,1.21647789569252,1.78049953762401,1.42888107384922,1.50649623728312,1.15745532278223,2.47251540481984,1.03039244094078,2.05721551431249,1.95223386775271,1.43061713968393,1.30811774969096,1.2234219453993,0.930760686808441,2.0122077016005,0.789209134313529,1.90125759384206,1.68342681497322,1.30498519936592,1.18205378850676,1.22769312950907,1.85924209423159,1.15743966588685,0.249810577937946,0.701794825336225,2.14871054048298,2.86932498103265,1.10295709559758,2.55054619182464 | |||
|short_description=p3@Neb | |||
}} |
Revision as of 05:54, 5 August 2015
Short description: | p3@Neb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Neb_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | -48bp_to_ENSMUST00000075301_5end |
EntrezGene: | 17996 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.85e-09 | 5 |
stylopod | 3.85e-09 | 5 |
lower limb segment | 3.85e-09 | 5 |
multi-limb segment region | 3.85e-09 | 5 |
pelvic appendage | 3.85e-09 | 5 |
limb segment | 3.85e-09 | 5 |
paired limb/fin segment | 3.85e-09 | 5 |
pelvic appendage bud | 3.85e-09 | 5 |
subdivision of organism along appendicular axis | 3.85e-09 | 5 |
leg | 3.85e-09 | 5 |
hindlimb | 3.85e-09 | 5 |
hindlimb stylopod | 3.85e-09 | 5 |
posterior region of body | 3.85e-09 | 5 |
pelvic complex | 3.85e-09 | 5 |
hindlimb/pelvic fin field | 3.85e-09 | 5 |