FFCP PHASE1:Hg19::chr7:94047076..94047090,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1278 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2198 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000461525_5end | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_29_at_COL1A2_5end | |||
|id=chr7:94047076..94047090,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.91e-29!180;CL:0000057!1.38e-20!75;CL:0000183!5.64e-15!59;CL:0000680!1.39e-14!57;CL:0000056!1.39e-14!57;CL:0000355!1.39e-14!57;CL:0000187!2.71e-14!54;CL:0000393!1.12e-11!60;CL:0000211!1.12e-11!60;CL:0000048!5.29e-11!430;CL:0000192!1.39e-10!42;CL:0000514!1.39e-10!42;CL:0002620!1.54e-10!23;CL:0000723!2.49e-10!436;CL:0000034!8.80e-10!444;CL:0002494!8.90e-09!16;CL:0000359!1.78e-07!32;CL:0000499!3.83e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002570;2.14e-10;8!CL:0000135;8.18e-09;3!CL:0000388;8.18e-09;3!CL:0000499;1.87e-08;28!CL:0002579;3.32e-08;3!CL:0002580;7.37e-08;3!CL:0000632;1.26e-07;3!CL:0000327;4.10e-07;15!CL:0000138;4.67e-07;6!CL:0002334;8.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.59e-15,76;CL:0002570,1.24e-10,8;CL:0000135,8.04e-09,3;CL:0000388,8.04e-09,3;CL:0000499,1.91e-08,28;CL:0002580,6.13e-08,3;CL:0002579,6.28e-08,3;CL:0000632,8.17e-08,3;CL:0000136,1.82e-07,15;CL:0000327,3.94e-07,15;CL:0000058,5.87e-07,6;CL:0000138,5.87e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.94e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.47e-15!61;UBERON:0002036!3.47e-15!61;UBERON:0003082!3.47e-15!61;UBERON:0004290!1.51e-14!70;UBERON:0002385!2.81e-14!63;UBERON:0001015!2.81e-14!63;UBERON:0000383!2.81e-14!63;UBERON:0000914!4.02e-14!83;UBERON:0002329!4.02e-14!83;UBERON:0003077!4.02e-14!83;UBERON:0003059!4.02e-14!83;UBERON:0007282!4.02e-14!83;UBERON:0009618!4.02e-14!83;UBERON:0007285!4.02e-14!83;UBERON:0000486!6.14e-12!82;UBERON:0005256!5.28e-09!143;UBERON:0004872!2.36e-08!84;UBERON:0000948!7.99e-08!24;UBERON:0005498!7.99e-08!24;UBERON:0004140!7.99e-08!24;UBERON:0009881!7.99e-08!24;UBERON:0004141!7.99e-08!24;UBERON:0003084!7.99e-08!24;UBERON:0007005!7.99e-08!24;UBERON:0004139!7.99e-08!24;UBERON:0004291!7.99e-08!24;UBERON:0002100!2.23e-07!216;UBERON:0002199!2.73e-07!45;UBERON:0002416!2.73e-07!45;UBERON:0003688!4.73e-07!6;UBERON:0002358!4.73e-07!6;UBERON:0003684!4.73e-07!6;UBERON:0001178!4.73e-07!6;UBERON:0003102!8.54e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.36e-10;6!UBERON:0002358;1.36e-10;6!UBERON:0003684;1.36e-10;6!UBERON:0001178;1.36e-10;6!UBERON:0007846;8.18e-09;3!UBERON:0000043;8.18e-09;3!UBERON:0007845;8.18e-09;3!UBERON:0001443;1.88e-07;11!UBERON:0001013;1.94e-07;14!UBERON:0004457;6.62e-07;9!UBERON:0000042;6.62e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.76e-10,6;UBERON:0002358,2.76e-10,6;UBERON:0003684,2.76e-10,6;UBERON:0001178,2.76e-10,6;UBERON:0007846,8.04e-09,3;UBERON:0000043,8.04e-09,3;UBERON:0007845,8.04e-09,3;UBERON:0001013,1.13e-07,14;UBERON:0001443,1.81e-07,11 | |||
|phase1_expression=1.2717486548939,3.63970890614671,0.845726424575827,2.00146596706261,3.5756887554183,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0.722878304769133,2.50668955317945,1.15877215168659,3.1811437882044,5.35298357332899,0.0945348171640679,0,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0.662045904066094,2.0078563452417,0,8.41016400213461,2.1349799145941,0.74000264525148,0.311211035399766,0.942974704487816,0.490385709340376,2.4217188423189,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,3.21447008062124,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,2.10333282469236,0.226864366320042,0.89694817844431,2.34913127700424,1.90738711043606,2.10063767259082,0.721367704669072,0.772921620136887,0.37223371266318,2.86919764810153,0.876933046450788,2.27190396819703,1.10459878370759,0.646584227275248,3.90510551768276,1.0075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.775630294546667,0,1.690605505112,0,0,0,0,0.266422179016099,0.857867961948885,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,2.9115920614313,3.7470087647404,1.57702415033935,0.702848489956279,1.50473049863859,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0.391602314925481,1.71571711905428,0,0,0,0,0,0.604780586659361,1.73675465473144,1.2276957863045,4.49056151092918,1.02511319404561,2.04682899626681,4.82561763430822,0,0.308419387605311,0.710246901252508,0.164254312027618,0,0,0,0,0,0.114814448164607,0.728364672026868,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0.322260734604821,0.870100163485371,0.0852266274161009,0.267096106940212,0,0,0,0,0.929691098594572,2.83331112147576,0,0.616067160352178,0,0,0.37064843820784,0.858749320451947,0,0,1.5250415513906,0.511795582622668,0.855877976067841,0.318203247925937,1.56989728039846,0.359744915166629,0.823611089208164,0.706874414074119,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.545999645631943,1.1312434556297,0,0.551365343546124,0,0.876901770507525,0.578775534266688,0.655894752046633,2.63783490051515,0.30982349809975,1.40847801266121,0.143411352204052,0.294747123039363,2.1400263088875,0,0.844430541190656,0.658589785919804,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,1.24415835064723,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,1.62899880526114,1.72844298240254,0.653174720218818,0,0,1.36310417428337,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,1.19403842309499,1.8697064787778,1.66441758450784,0.378806010550178,1.0062716070103,0.889811221596536,0.228840068396924,1.20984739010591,1.70980920641059,0.443565449968902,0.477890301491107,0.899606224327209,0.621051827505038,0.414706207840855,1.06336685823198,1.04349012362347,0.450772826991655,0.380805212168795,0,0.181848659202559,0.429642228169954,2.78420255927096,0.796191777397232,0,8.58489262956982,4.37774335395695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0.636008701306837,0,0,3.52675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0.0752103283492573,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,1.82631744101899,0,0,0,0,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,5.799072156691,5.82853191670967,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,3.3812458206672,1.69927114687817,0,0.064457887973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| |||
|short_description=p29@COL1A2 | |||
}} |
Revision as of 17:57, 22 January 2014
Short description: | p29@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_ENST00000461525_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.59e-15 | 76 |
mesenchymal stem cell of adipose | 1.24e-10 | 8 |
fibrocyte | 8.04e-09 | 3 |
tendon cell | 8.04e-09 | 3 |
stromal cell | 1.91e-08 | 28 |
preadipocyte of the breast | 6.13e-08 | 3 |
omentum preadipocyte | 6.28e-08 | 3 |
hepatic stellate cell | 8.17e-08 | 3 |
fat cell | 1.82e-07 | 15 |
extracellular matrix secreting cell | 3.94e-07 | 15 |
chondroblast | 5.87e-07 | 6 |
chondrocyte | 5.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.76e-10 | 6 |
peritoneum | 2.76e-10 | 6 |
abdominal cavity | 2.76e-10 | 6 |
visceral peritoneum | 2.76e-10 | 6 |
dense regular connective tissue | 8.04e-09 | 3 |
tendon | 8.04e-09 | 3 |
regular connective tissue | 8.04e-09 | 3 |
adipose tissue | 1.13e-07 | 14 |
chest | 1.81e-07 | 11 |