Personal tools

FFCP PHASE1:Mm9::chr3:81779664..81779682,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=56720|HGNC=|MCL_coexpression_id=8|UniProt=P48776|association_with_transcript=0bp_to_ENSMUST00000029645_5end|description=CAGE_peak_1_at_Tdo2_5end|id=chr3:81779664..81779682,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.83e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.24e-11!130;UBERON:0000925!3.24e-11!130;UBERON:0006595!3.24e-11!130;UBERON:0000077!6.18e-11!97;UBERON:0004921!9.52e-11!126;UBERON:0004185!9.52e-11!126;UBERON:0001007!3.33e-10!128;UBERON:0001555!3.33e-10!128;UBERON:0007026!3.33e-10!128;UBERON:0009569!3.60e-10!66;UBERON:0001041!4.56e-10!92;UBERON:0002107!1.05e-09!22;UBERON:0007499!1.05e-09!22;UBERON:0006925!1.05e-09!22;UBERON:0009497!1.05e-09!22;UBERON:0000015!1.05e-09!22;UBERON:0002423!1.05e-09!22;UBERON:0006235!1.05e-09!22;UBERON:0008835!1.05e-09!22;UBERON:0003894!1.05e-09!22;UBERON:0004161!1.05e-09!22;UBERON:0008836!1.05e-09!22;UBERON:0005911!1.18e-09!69;UBERON:0009854!6.08e-09!23;UBERON:0009856!6.08e-09!23;UBERON:0002365!1.34e-08!25;UBERON:0002330!1.34e-08!25;UBERON:0005177!2.17e-07!85;UBERON:0002048!7.44e-07!14;UBERON:0000117!7.44e-07!14;UBERON:0000171!7.44e-07!14;UBERON:0000170!7.44e-07!14;UBERON:0005597!7.44e-07!14;UBERON:0000118!7.44e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-17,22;UBERON:0007499,1.55e-17,22;UBERON:0006925,1.55e-17,22;UBERON:0009497,1.55e-17,22;UBERON:0000015,1.55e-17,22;UBERON:0002423,1.55e-17,22;UBERON:0006235,1.55e-17,22;UBERON:0008835,1.55e-17,22;UBERON:0003894,1.55e-17,22;UBERON:0004161,1.55e-17,22;UBERON:0008836,1.55e-17,22;UBERON:0009854,1.38e-16,23;UBERON:0009856,1.38e-16,23;UBERON:0002365,6.41e-15,25;UBERON:0002330,6.41e-15,25;UBERON:0005256,6.39e-11,45;UBERON:0009569,3.60e-09,66;UBERON:0005172,1.57e-08,49;UBERON:0005173,1.57e-08,49;UBERON:0002417,1.57e-08,49;UBERON:0000916,1.57e-08,49;UBERON:0005177,2.91e-08,79;UBERON:0003914,6.07e-08,47;UBERON:0004119,6.83e-08,118;UBERON:0000925,6.83e-08,118;UBERON:0006595,6.83e-08,118;UBERON:0001041,2.06e-07,80;UBERON:0004921,7.10e-07,114;UBERON:0003104,9.04e-07,61;UBERON:0009142,9.04e-07,61|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.766124028511126,0.153606533256243,0,0,0,0,0,0.15279824777681,0.589257170947335,1.13897344639282,0,0,0,3.76823835312181,1586.62162915368,281.508132155009,2442.69664535276,3669.28742932699,2762.98181272927,588.181231511777,0,0,0,0,0,0,0,0,0,0,1737.76446544437,0.517875767294343,8.01587550950054,0,0,0,0.150722640552623,0,8.67099480174761,60.0683771594529,1.87979163995885,0,0,0,0,0,4.68449275218475,3.97948742945565,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0,0,0,0,0,0,0,0.646703978798527,0.189106080167819,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0.439100230582101,1.20785776884335,8.62188789112922,0.205809224758569,0,0.264450566663544,4.05247676016945,1.39342003116263,0.515469845288373,0.80673409849337,0,0.190225626112559,0,0.988193728344065,1.25667604400135,1.39269530428806,1.36474860983384,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,2114.89304163972,0,0.196558995113203,0,0.202860121388503,0,0,0.863088412352432,18.159145398804,50.2447386134189,162.458073375911,194.629715630627,490.211184462975,996.171094623409,1409.88427286871,3570.08205808892,1.66277871149944,1.51593129416388,0.488894929326078,1.18821560042632,0.469380496577004,1.00503754465089,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.956728611944923,0.983179888294428,0.518054945597687,1.59113964439663,0,0,0,0.551873492609465,0,0,0,0,1.89304931649754,0,0,0,0,0.566153061577665,1.21443210502468,0.584511715822624,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,488.351824480581,8.26145076368899,0,3.2977250588296,0,0,0,0,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0,0,0,0,0,9.54670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.655087691238533,5.66430254816247,23.3082745145447,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0.911430693907651,0,0,0.576060012515731,0.948033361884535,0,0.308132871494482,0.51968329191118,0.537080087002444,0,0.841368146639782,0.147689527174577,0.403865799792591,0.228620419965,0.504130925684203,0.487289403698762,0.673482891482306,0.584384510907845,0.226730383615211,0,0,0,1.73870634628971,83.8940665266783,0,0,1.00314420807073,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0,1.01391719956096,0.188626341386076,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0.859484216193193,0.191288332068843,1.76473135295612,1.39120701372253|short_description=p1@Tdo2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56720
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:P48776
|association_with_transcript=0bp_to_ENSMUST00000029645_5end
|cluster_id=chr3:81779664..81779682,-
|description=CAGE_peak_1_at_Tdo2_5end
|id=chr3:81779664..81779682,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.83e-10,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.24e-11!130;UBERON:0000925!3.24e-11!130;UBERON:0006595!3.24e-11!130;UBERON:0000077!6.18e-11!97;UBERON:0004921!9.52e-11!126;UBERON:0004185!9.52e-11!126;UBERON:0001007!3.33e-10!128;UBERON:0001555!3.33e-10!128;UBERON:0007026!3.33e-10!128;UBERON:0009569!3.60e-10!66;UBERON:0001041!4.56e-10!92;UBERON:0002107!1.05e-09!22;UBERON:0007499!1.05e-09!22;UBERON:0006925!1.05e-09!22;UBERON:0009497!1.05e-09!22;UBERON:0000015!1.05e-09!22;UBERON:0002423!1.05e-09!22;UBERON:0006235!1.05e-09!22;UBERON:0008835!1.05e-09!22;UBERON:0003894!1.05e-09!22;UBERON:0004161!1.05e-09!22;UBERON:0008836!1.05e-09!22;UBERON:0005911!1.18e-09!69;UBERON:0009854!6.08e-09!23;UBERON:0009856!6.08e-09!23;UBERON:0002365!1.34e-08!25;UBERON:0002330!1.34e-08!25;UBERON:0005177!2.17e-07!85;UBERON:0002048!7.44e-07!14;UBERON:0000117!7.44e-07!14;UBERON:0000171!7.44e-07!14;UBERON:0000170!7.44e-07!14;UBERON:0005597!7.44e-07!14;UBERON:0000118!7.44e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-17,22;UBERON:0007499,1.55e-17,22;UBERON:0006925,1.55e-17,22;UBERON:0009497,1.55e-17,22;UBERON:0000015,1.55e-17,22;UBERON:0002423,1.55e-17,22;UBERON:0006235,1.55e-17,22;UBERON:0008835,1.55e-17,22;UBERON:0003894,1.55e-17,22;UBERON:0004161,1.55e-17,22;UBERON:0008836,1.55e-17,22;UBERON:0009854,1.38e-16,23;UBERON:0009856,1.38e-16,23;UBERON:0002365,6.41e-15,25;UBERON:0002330,6.41e-15,25;UBERON:0005256,6.39e-11,45;UBERON:0009569,3.60e-09,66;UBERON:0005172,1.57e-08,49;UBERON:0005173,1.57e-08,49;UBERON:0002417,1.57e-08,49;UBERON:0000916,1.57e-08,49;UBERON:0005177,2.91e-08,79;UBERON:0003914,6.07e-08,47;UBERON:0004119,6.83e-08,118;UBERON:0000925,6.83e-08,118;UBERON:0006595,6.83e-08,118;UBERON:0001041,2.06e-07,80;UBERON:0004921,7.10e-07,114;UBERON:0003104,9.04e-07,61;UBERON:0009142,9.04e-07,61
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.766124028511126,0.153606533256243,0,0,0,0,0,0.15279824777681,0.589257170947335,1.13897344639282,0,0,0,3.76823835312181,1586.62162915368,281.508132155009,2442.69664535276,3669.28742932699,2762.98181272927,588.181231511777,0,0,0,0,0,0,0,0,0,0,1737.76446544437,0.517875767294343,8.01587550950054,0,0,0,0.150722640552623,0,8.67099480174761,60.0683771594529,1.87979163995885,0,0,0,0,0,4.68449275218475,3.97948742945565,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0,0,0,0,0,0,0,0.646703978798527,0.189106080167819,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0.439100230582101,1.20785776884335,8.62188789112922,0.205809224758569,0,0.264450566663544,4.05247676016945,1.39342003116263,0.515469845288373,0.80673409849337,0,0.190225626112559,0,0.988193728344065,1.25667604400135,1.39269530428806,1.36474860983384,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,2114.89304163972,0,0.196558995113203,0,0.202860121388503,0,0,0.863088412352432,18.159145398804,50.2447386134189,162.458073375911,194.629715630627,490.211184462975,996.171094623409,1409.88427286871,3570.08205808892,1.66277871149944,1.51593129416388,0.488894929326078,1.18821560042632,0.469380496577004,1.00503754465089,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.956728611944923,0.983179888294428,0.518054945597687,1.59113964439663,0,0,0,0.551873492609465,0,0,0,0,1.89304931649754,0,0,0,0,0.566153061577665,1.21443210502468,0.584511715822624,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,488.351824480581,8.26145076368899,0,3.2977250588296,0,0,0,0,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0,0,0,0,0,9.54670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.655087691238533,5.66430254816247,23.3082745145447,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0.911430693907651,0,0,0.576060012515731,0.948033361884535,0,0.308132871494482,0.51968329191118,0.537080087002444,0,0.841368146639782,0.147689527174577,0.403865799792591,0.228620419965,0.504130925684203,0.487289403698762,0.673482891482306,0.584384510907845,0.226730383615211,0,0,0,1.73870634628971,83.8940665266783,0,0,1.00314420807073,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0,1.01391719956096,0.188626341386076,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0.859484216193193,0.191288332068843,1.76473135295612,1.39120701372253
|short_description=p1@Tdo2
}}

Revision as of 01:23, 4 August 2015

Short description:p1@Tdo2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tdo2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000029645_5end
EntrezGene:56720
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tdo2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71586.62
Mouse hepatocyte, donor1.CNhs13078.11714-123C4281.51
Mouse hepatocyte, donor3.CNhs12615.11637-122C82442.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43669.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F62762.98
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7588.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61737.76
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I38.67
amnion, adult pregnant day17.5.CNhs10488.583-22A860.07
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B22114.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G250.24
liver, neonate N06.CNhs11101.684-20A8162.46
liver, neonate N07.CNhs11103.716-20H2194.63
liver, neonate N10.CNhs11115.751-24B9490.21
liver, neonate N20.CNhs11220.823-25A3996.17
liver, neonate N25.CNhs11198.1368-26H11409.88
liver, neonate N30.CNhs11106.1382-42D13570.08
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I7488.35
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A923.31
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F583.89
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.83e-105

Uber anatomy
Ontology termp-valuen
liver1.55e-1722
epithelial sac1.55e-1722
digestive gland1.55e-1722
epithelium of foregut-midgut junction1.55e-1722
anatomical boundary1.55e-1722
hepatobiliary system1.55e-1722
foregut-midgut junction1.55e-1722
hepatic diverticulum1.55e-1722
liver primordium1.55e-1722
septum transversum1.55e-1722
liver bud1.55e-1722
digestive tract diverticulum1.38e-1623
sac1.38e-1623
exocrine gland6.41e-1525
exocrine system6.41e-1525
trunk mesenchyme6.39e-1145
subdivision of trunk3.60e-0966
abdomen element1.57e-0849
abdominal segment element1.57e-0849
abdominal segment of trunk1.57e-0849
abdomen1.57e-0849
trunk region element2.91e-0879
epithelial tube6.07e-0847
endoderm-derived structure6.83e-08118
endoderm6.83e-08118
presumptive endoderm6.83e-08118
foregut2.06e-0780
subdivision of digestive tract7.10e-07114
mesenchyme9.04e-0761
entire embryonic mesenchyme9.04e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:81779664..81779682,-&oldid=3721533"