FFCP PHASE1:Mm9::chr3:96628027..96628046,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2213|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:96628027..96628046,+|id=chr3:96628027..96628046,+|ontology_enrichment_celltype=CL:0000239!8.62e-10!6;CL:0000677!8.62e-10!6;CL:0000212!8.62e-10!6;CL:0000584!8.62e-10!6;CL:0000075!3.07e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.22e-14,6;CL:0000677,2.22e-14,6;CL:0000584,2.22e-14,6;CL:0000075,3.18e-12,7;CL:0002563,2.39e-09,9;CL:0002251,2.39e-09,9;CL:0000682,1.21e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.60e-18!43;UBERON:0000344!5.65e-12!15;UBERON:0005409!3.85e-11!59;UBERON:0001242!2.39e-09!13;UBERON:0000060!2.39e-09!13;UBERON:0001262!2.39e-09!13;UBERON:0004786!2.39e-09!13;UBERON:0002113!7.86e-08!14;UBERON:0003918!7.86e-08!14;UBERON:0005095!7.86e-08!14;UBERON:0007687!7.86e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.67e-32,31;UBERON:0005409,1.53e-19,47;UBERON:0000344,1.12e-18,15;UBERON:0001242,1.59e-14,13;UBERON:0001262,1.59e-14,13;UBERON:0004786,1.59e-14,13;UBERON:0002108,4.40e-11,4;UBERON:0004923,9.09e-11,24;UBERON:0002113,3.45e-10,14;UBERON:0003918,3.45e-10,14;UBERON:0011143,3.45e-10,14;UBERON:0005095,3.45e-10,14;UBERON:0007687,3.45e-10,14;UBERON:0003350,2.39e-09,9;UBERON:0004808,2.39e-09,9;UBERON:0001277,2.39e-09,9;UBERON:0000331,5.37e-09,3;UBERON:0002116,5.37e-09,3;UBERON:0001204,5.37e-09,3;UBERON:0001168,5.37e-09,3;UBERON:0006554,1.29e-07,18;UBERON:0000485,1.62e-07,11;UBERON:0001008,3.82e-07,19|phase1_expression=0,8.72438519098403,12.2849794635175,6.0492842261366,6.51164448930251,2.01455126294268,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78294373027274,0,0,6.71968175732308,9.63518980482114,16.6527269593356,12.9228598847722,8.61884930743556,52.8265106088719,20.4144405105544,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,1.21010114774006,3.11329261382818,1.52180500890047,3.79623249235609,1.97638745668813,0.502670417600539,1.98956472041151,1.9496408711912,3.59527763461689,2.59365659849633,2.78797782556114,0,0.114248512609729,1.1270773567308,2.64746726198909,2.32742984601151,4.20814919341911,9.48548056863859,33.3598934433901,29.5157608341785,31.7130711279027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.754505365544305,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.338458431566706,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr3:96628027..96628046,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2213 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:96628027..96628046,+ | |||
|description=CAGE_peak_at_chr3:96628027..96628046,+ | |||
|id=chr3:96628027..96628046,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.62e-10!6;CL:0000677!8.62e-10!6;CL:0000212!8.62e-10!6;CL:0000584!8.62e-10!6;CL:0000075!3.07e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.22e-14,6;CL:0000677,2.22e-14,6;CL:0000584,2.22e-14,6;CL:0000075,3.18e-12,7;CL:0002563,2.39e-09,9;CL:0002251,2.39e-09,9;CL:0000682,1.21e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.60e-18!43;UBERON:0000344!5.65e-12!15;UBERON:0005409!3.85e-11!59;UBERON:0001242!2.39e-09!13;UBERON:0000060!2.39e-09!13;UBERON:0001262!2.39e-09!13;UBERON:0004786!2.39e-09!13;UBERON:0002113!7.86e-08!14;UBERON:0003918!7.86e-08!14;UBERON:0005095!7.86e-08!14;UBERON:0007687!7.86e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.67e-32,31;UBERON:0005409,1.53e-19,47;UBERON:0000344,1.12e-18,15;UBERON:0001242,1.59e-14,13;UBERON:0001262,1.59e-14,13;UBERON:0004786,1.59e-14,13;UBERON:0002108,4.40e-11,4;UBERON:0004923,9.09e-11,24;UBERON:0002113,3.45e-10,14;UBERON:0003918,3.45e-10,14;UBERON:0011143,3.45e-10,14;UBERON:0005095,3.45e-10,14;UBERON:0007687,3.45e-10,14;UBERON:0003350,2.39e-09,9;UBERON:0004808,2.39e-09,9;UBERON:0001277,2.39e-09,9;UBERON:0000331,5.37e-09,3;UBERON:0002116,5.37e-09,3;UBERON:0001204,5.37e-09,3;UBERON:0001168,5.37e-09,3;UBERON:0006554,1.29e-07,18;UBERON:0000485,1.62e-07,11;UBERON:0001008,3.82e-07,19 | |||
|phase1_expression=0,8.72438519098403,12.2849794635175,6.0492842261366,6.51164448930251,2.01455126294268,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78294373027274,0,0,6.71968175732308,9.63518980482114,16.6527269593356,12.9228598847722,8.61884930743556,52.8265106088719,20.4144405105544,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,1.21010114774006,3.11329261382818,1.52180500890047,3.79623249235609,1.97638745668813,0.502670417600539,1.98956472041151,1.9496408711912,3.59527763461689,2.59365659849633,2.78797782556114,0,0.114248512609729,1.1270773567308,2.64746726198909,2.32742984601151,4.20814919341911,9.48548056863859,33.3598934433901,29.5157608341785,31.7130711279027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.754505365544305,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.338458431566706,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:96628027..96628046,+ | |||
}} |
Latest revision as of 09:39, 4 August 2015
Short description: | p@chr3:96628027..96628046, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:96628027..96628046, + |
Coexpression cluster: | MCL_coexpression_mm9:2213 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.22e-14 | 6 |
gut absorptive cell | 2.22e-14 | 6 |
enterocyte | 2.22e-14 | 6 |
columnar/cuboidal epithelial cell | 3.18e-12 | 7 |
intestinal epithelial cell | 2.39e-09 | 9 |
epithelial cell of alimentary canal | 2.39e-09 | 9 |
M cell of gut | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.67e-32 | 31 |
gastrointestinal system | 1.53e-19 | 47 |
mucosa | 1.12e-18 | 15 |
intestinal mucosa | 1.59e-14 | 13 |
wall of intestine | 1.59e-14 | 13 |
gastrointestinal system mucosa | 1.59e-14 | 13 |
small intestine | 4.40e-11 | 4 |
organ component layer | 9.09e-11 | 24 |
kidney | 3.45e-10 | 14 |
kidney mesenchyme | 3.45e-10 | 14 |
upper urinary tract | 3.45e-10 | 14 |
kidney rudiment | 3.45e-10 | 14 |
kidney field | 3.45e-10 | 14 |
epithelium of mucosa | 2.39e-09 | 9 |
gastrointestinal system epithelium | 2.39e-09 | 9 |
intestinal epithelium | 2.39e-09 | 9 |
ileal mucosa | 5.37e-09 | 3 |
ileum | 5.37e-09 | 3 |
mucosa of small intestine | 5.37e-09 | 3 |
wall of small intestine | 5.37e-09 | 3 |
urinary system structure | 1.29e-07 | 18 |
simple columnar epithelium | 1.62e-07 | 11 |
renal system | 3.82e-07 | 19 |