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FFCP PHASE1:Mm9::chr4:128295816..128295841,-: Difference between revisions

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{{FFCP|EntrezGene=384059|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000133382_5end|description=CAGE_peak_1_at_Tlr12_5end|id=chr4:128295816..128295841,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.21e-10!128;UBERON:0001555!2.21e-10!128;UBERON:0007026!2.21e-10!128;UBERON:0004119!2.35e-10!130;UBERON:0000925!2.35e-10!130;UBERON:0006595!2.35e-10!130;UBERON:0004921!5.33e-10!126;UBERON:0004185!5.33e-10!126;UBERON:0005172!8.09e-09!49;UBERON:0005173!8.09e-09!49;UBERON:0002417!8.09e-09!49;UBERON:0000916!8.09e-09!49;UBERON:0009569!8.36e-09!66;UBERON:0005177!1.40e-08!85;UBERON:0005057!1.59e-08!51;UBERON:0002405!1.07e-07!70;UBERON:0000077!2.83e-07!97;UBERON:0001041!2.83e-07!92;UBERON:0002530!4.68e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.30e-20,114;UBERON:0004119,9.08e-20,118;UBERON:0000925,9.08e-20,118;UBERON:0006595,9.08e-20,118;UBERON:0001007,1.73e-19,116;UBERON:0001555,1.73e-19,116;UBERON:0007026,1.73e-19,116;UBERON:0001041,3.26e-13,80;UBERON:0011216,3.06e-10,194;UBERON:0009569,1.82e-09,66;UBERON:0005911,1.88e-09,69;UBERON:0005172,4.61e-09,49;UBERON:0005173,4.61e-09,49;UBERON:0002417,4.61e-09,49;UBERON:0000916,4.61e-09,49;UBERON:0009854,1.71e-08,23;UBERON:0009856,1.71e-08,23;UBERON:0002530,2.06e-08,65;UBERON:0002365,2.69e-08,25;UBERON:0002330,2.69e-08,25;UBERON:0003929,5.44e-08,55;UBERON:0002368,5.76e-08,60;UBERON:0002107,6.24e-08,22;UBERON:0007499,6.24e-08,22;UBERON:0006925,6.24e-08,22;UBERON:0009497,6.24e-08,22;UBERON:0000015,6.24e-08,22;UBERON:0002423,6.24e-08,22;UBERON:0006235,6.24e-08,22;UBERON:0008835,6.24e-08,22;UBERON:0003894,6.24e-08,22;UBERON:0004161,6.24e-08,22;UBERON:0008836,6.24e-08,22;UBERON:0004177,2.00e-07,29;UBERON:0005057,2.00e-07,29;UBERON:0005177,2.41e-07,79;UBERON:0005409,3.14e-07,47;UBERON:0000077,6.16e-07,35|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.856003649656029,0.611942816932982,1.33243904726265,0.809901069559304,0.699561878128147,0.630924330716475,1.23402990245165,0.84877930359606,0.595303031057488,0,0.261199789138935,0.95995453676044,0.91763712426868,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,4.7053131879945,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,1.42825492201902,1.54607978666129,0.489963196859816,0.479227355091182,2.75765635983006,0,0.127687338085188,0.153606533256243,0.527545150920775,1.00636407962651,0,0,0,0.15279824777681,2.06240009831567,1.85083185038834,1.1183966749518,0,0,0.869593466105033,2.58127163094416,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.68510327831436,2.58937883647172,3.41416919849097,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0.502666365318702,0.247194967734374,0,2.65383165584962,0.323533699894818,0.220841518460394,1.45462575940567,1.86391761218122,0.585561594023094,0,8.68553987709211,0.838705871541442,0.599902730993408,0.381210681219194,0.299581278809645,0,0.879580464790051,0.347648640384553,0,0,0.324482526135515,0.611036183101898,1.61729061793121,1.26361379216837,0,0.260240885925407,0,0.540186389416048,0.452114453507145,0,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.378212160335639,0.703804496655795,1.09597866213787,0.556094498451196,0.696504333044333,0.61734640922383,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0,0,0.439100230582101,0.268412837520744,0,0.308713837137853,1.32167513193519,3.70230793328962,0,0.696710015581316,1.54640953586512,2.21851877085677,3.33567065767305,3.23383564391351,9.01605216934572,3.29397909448022,5.52937459360593,2.38747766449381,4.874102177978,4.49409704327111,4.53889904736858,5.37681437786791,0.569003702859245,1.25673363870702,2.25415471346161,1.62921062276251,2.32742984601151,0.561086559122548,1.3279672796094,0.885660887877613,0.627994911365499,0.246794327843601,1.48226313543574,1.00107063429656,1.37591296579242,1.12431056192427,1.62288097110802,1.68824011826692,3.56476192493988,3.45235364940973,1.62135226775035,3.0201755450689,2.87536413054709,3.34926852901653,5.30464044294753,1.26289438973556,2.33216637578486,1.4473305640901,1.84753190166605,0,1.14075483509418,0.339490171550376,0.469380496577004,1.17254380209271,2.85652369063216,0.585400943573396,2.52216230569906,2.43611158613652,1.2756381492599,1.14704320301017,0.863424909329478,0.433947175744535,0,0,1.96705709207614,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.712262414669021,0.488660878060728,4.28922319728592,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.72706745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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:384059
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000133382_5end
|cluster_id=chr4:128295816..128295841,-
|description=CAGE_peak_1_at_Tlr12_5end
|id=chr4:128295816..128295841,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!2.21e-10!128;UBERON:0001555!2.21e-10!128;UBERON:0007026!2.21e-10!128;UBERON:0004119!2.35e-10!130;UBERON:0000925!2.35e-10!130;UBERON:0006595!2.35e-10!130;UBERON:0004921!5.33e-10!126;UBERON:0004185!5.33e-10!126;UBERON:0005172!8.09e-09!49;UBERON:0005173!8.09e-09!49;UBERON:0002417!8.09e-09!49;UBERON:0000916!8.09e-09!49;UBERON:0009569!8.36e-09!66;UBERON:0005177!1.40e-08!85;UBERON:0005057!1.59e-08!51;UBERON:0002405!1.07e-07!70;UBERON:0000077!2.83e-07!97;UBERON:0001041!2.83e-07!92;UBERON:0002530!4.68e-07!65
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.30e-20,114;UBERON:0004119,9.08e-20,118;UBERON:0000925,9.08e-20,118;UBERON:0006595,9.08e-20,118;UBERON:0001007,1.73e-19,116;UBERON:0001555,1.73e-19,116;UBERON:0007026,1.73e-19,116;UBERON:0001041,3.26e-13,80;UBERON:0011216,3.06e-10,194;UBERON:0009569,1.82e-09,66;UBERON:0005911,1.88e-09,69;UBERON:0005172,4.61e-09,49;UBERON:0005173,4.61e-09,49;UBERON:0002417,4.61e-09,49;UBERON:0000916,4.61e-09,49;UBERON:0009854,1.71e-08,23;UBERON:0009856,1.71e-08,23;UBERON:0002530,2.06e-08,65;UBERON:0002365,2.69e-08,25;UBERON:0002330,2.69e-08,25;UBERON:0003929,5.44e-08,55;UBERON:0002368,5.76e-08,60;UBERON:0002107,6.24e-08,22;UBERON:0007499,6.24e-08,22;UBERON:0006925,6.24e-08,22;UBERON:0009497,6.24e-08,22;UBERON:0000015,6.24e-08,22;UBERON:0002423,6.24e-08,22;UBERON:0006235,6.24e-08,22;UBERON:0008835,6.24e-08,22;UBERON:0003894,6.24e-08,22;UBERON:0004161,6.24e-08,22;UBERON:0008836,6.24e-08,22;UBERON:0004177,2.00e-07,29;UBERON:0005057,2.00e-07,29;UBERON:0005177,2.41e-07,79;UBERON:0005409,3.14e-07,47;UBERON:0000077,6.16e-07,35
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.856003649656029,0.611942816932982,1.33243904726265,0.809901069559304,0.699561878128147,0.630924330716475,1.23402990245165,0.84877930359606,0.595303031057488,0,0.261199789138935,0.95995453676044,0.91763712426868,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,4.7053131879945,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,1.42825492201902,1.54607978666129,0.489963196859816,0.479227355091182,2.75765635983006,0,0.127687338085188,0.153606533256243,0.527545150920775,1.00636407962651,0,0,0,0.15279824777681,2.06240009831567,1.85083185038834,1.1183966749518,0,0,0.869593466105033,2.58127163094416,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.68510327831436,2.58937883647172,3.41416919849097,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0.502666365318702,0.247194967734374,0,2.65383165584962,0.323533699894818,0.220841518460394,1.45462575940567,1.86391761218122,0.585561594023094,0,8.68553987709211,0.838705871541442,0.599902730993408,0.381210681219194,0.299581278809645,0,0.879580464790051,0.347648640384553,0,0,0.324482526135515,0.611036183101898,1.61729061793121,1.26361379216837,0,0.260240885925407,0,0.540186389416048,0.452114453507145,0,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.378212160335639,0.703804496655795,1.09597866213787,0.556094498451196,0.696504333044333,0.61734640922383,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0,0,0.439100230582101,0.268412837520744,0,0.308713837137853,1.32167513193519,3.70230793328962,0,0.696710015581316,1.54640953586512,2.21851877085677,3.33567065767305,3.23383564391351,9.01605216934572,3.29397909448022,5.52937459360593,2.38747766449381,4.874102177978,4.49409704327111,4.53889904736858,5.37681437786791,0.569003702859245,1.25673363870702,2.25415471346161,1.62921062276251,2.32742984601151,0.561086559122548,1.3279672796094,0.885660887877613,0.627994911365499,0.246794327843601,1.48226313543574,1.00107063429656,1.37591296579242,1.12431056192427,1.62288097110802,1.68824011826692,3.56476192493988,3.45235364940973,1.62135226775035,3.0201755450689,2.87536413054709,3.34926852901653,5.30464044294753,1.26289438973556,2.33216637578486,1.4473305640901,1.84753190166605,0,1.14075483509418,0.339490171550376,0.469380496577004,1.17254380209271,2.85652369063216,0.585400943573396,2.52216230569906,2.43611158613652,1.2756381492599,1.14704320301017,0.863424909329478,0.433947175744535,0,0,1.96705709207614,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.712262414669021,0.488660878060728,4.28922319728592,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0,0,0,0,0.540183282093931,0.905510786479282,0.643011105094777,0.886701168211368,0.891844088010353,1.15184314421485,0.304464949114599,0,2.1183207086382,0,0,0,0,0,0.164140899745061,7.28702091574627,0.18542530201051,2.9048049735635,1.23832120777933,0.740778109478847,3.57900068308913,1.6403307326523,2.51655990527175,0.509935289981566,0.279902904647316,0.829199842826543,0,0.316335993581135,0.609958401380546,0.648032044930808,0.836353184057875,1.9652630737156,0.674321731924103,1.23980183588004,0.523511883968059,2.33306951925227,1.24267862617385,0,0.897099276263873,0.66183396182839,0.777804753376191,0.774958940866387,0.675824501963113,0,0.651021924219751,0.734015410979976,0,0,6.32022241256356,1.82452693761148,1.54066435747241,1.55904987573354,1.43221356533985,1.19208812868759,2.28371354087941,2.06765338044408,2.52416124870369,2.51482461961499,3.32726410951574,4.48306251402861,3.55983814069219,5.37633750035217,0,0,0,0,3.09103350451505,0.563047426353546,2.38097111547445,0.643105137237198,1.00314420807073,0,0,1.71868654031819,0.515559547031063,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.209613162627982,0.551530525350042,0.666740183404846,0.824140228955577,1.60459604795908,0.505394423527595,0.50695859978048,0.377252682772152,0.749132059759059,0.832326981263301,0.459483751644906,1.42888107384922,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.887379030796687,1.1921809497366,0.145346416632329,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,1.22223702461276,2.24456908663095,0.711810108745045,0.689531376628944,0.409231043169689,0.929621047115796,0.771626443924566,0.749431733813838,0,0,0,0.220591419119515,0.463735671240843
|short_description=p1@Tlr12
}}

Revision as of 18:52, 4 August 2015

Short description:p1@Tlr12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tlr12_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000133382_5end
EntrezGene:384059
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tlr12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H78.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract3.30e-20114
endoderm-derived structure9.08e-20118
endoderm9.08e-20118
presumptive endoderm9.08e-20118
digestive system1.73e-19116
digestive tract1.73e-19116
primitive gut1.73e-19116
foregut3.26e-1380
organ system subdivision3.06e-10194
subdivision of trunk1.82e-0966
endo-epithelium1.88e-0969
abdomen element4.61e-0949
abdominal segment element4.61e-0949
abdominal segment of trunk4.61e-0949
abdomen4.61e-0949
digestive tract diverticulum1.71e-0823
sac1.71e-0823
gland2.06e-0865
exocrine gland2.69e-0825
exocrine system2.69e-0825
gut epithelium5.44e-0855
endocrine gland5.76e-0860
liver6.24e-0822
epithelial sac6.24e-0822
digestive gland6.24e-0822
epithelium of foregut-midgut junction6.24e-0822
anatomical boundary6.24e-0822
hepatobiliary system6.24e-0822
foregut-midgut junction6.24e-0822
hepatic diverticulum6.24e-0822
liver primordium6.24e-0822
septum transversum6.24e-0822
liver bud6.24e-0822
hemopoietic organ2.00e-0729
immune organ2.00e-0729
trunk region element2.41e-0779
gastrointestinal system3.14e-0747
mixed endoderm/mesoderm-derived structure6.16e-0735
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