FFCP PHASE1:Mm9::chr4:21699556..21699564,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1529|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:21699556..21699564,-|id=chr4:21699556..21699564,-|ontology_enrichment_celltype=CL:0000239!1.46e-12!6;CL:0000677!1.46e-12!6;CL:0000212!1.46e-12!6;CL:0000584!1.46e-12!6;CL:0002563!1.83e-11!9;CL:0002251!1.83e-11!9;CL:0000075!1.01e-10!7;CL:0000473!5.39e-10!3;CL:0000627!5.39e-10!3;CL:0000682!5.39e-10!3;CL:0000066!2.59e-08!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.82e-15,3;CL:0000239,2.36e-13,6;CL:0000677,2.36e-13,6;CL:0000584,2.36e-13,6;CL:0000075,1.78e-11,7;CL:0000066,5.45e-09,25;CL:0002563,5.77e-09,9;CL:0002251,5.77e-09,9;CL:0000473,6.45e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.24e-27!15;UBERON:0001242!5.70e-22!13;UBERON:0000060!5.70e-22!13;UBERON:0001262!5.70e-22!13;UBERON:0004786!5.70e-22!13;UBERON:0000160!1.76e-21!43;UBERON:0005409!2.99e-16!59;UBERON:0004923!6.03e-16!24;UBERON:0003350!1.83e-11!9;UBERON:0004808!1.83e-11!9;UBERON:0001277!1.83e-11!9;UBERON:0000331!3.82e-10!3;UBERON:0002116!3.82e-10!3;UBERON:0001204!3.82e-10!3;UBERON:0001168!3.82e-10!3;UBERON:0000485!2.91e-09!11;UBERON:0002465!4.56e-09!3;UBERON:0001007!1.30e-07!128;UBERON:0001555!1.30e-07!128;UBERON:0007026!1.30e-07!128;UBERON:0004119!2.02e-07!130;UBERON:0000925!2.02e-07!130;UBERON:0006595!2.02e-07!130;UBERON:0001962!9.70e-07!2;UBERON:0001961!9.70e-07!2;UBERON:0001744!9.70e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-29,31;UBERON:0000344,1.23e-25,15;UBERON:0001242,1.03e-23,13;UBERON:0001262,1.03e-23,13;UBERON:0004786,1.03e-23,13;UBERON:0005409,9.17e-19,47;UBERON:0000331,1.03e-15,3;UBERON:0002116,1.03e-15,3;UBERON:0001204,1.03e-15,3;UBERON:0001168,1.03e-15,3;UBERON:0004923,1.33e-15,24;UBERON:0002108,6.33e-12,4;UBERON:0003350,5.77e-09,9;UBERON:0004808,5.77e-09,9;UBERON:0001277,5.77e-09,9;UBERON:0001007,1.95e-07,116;UBERON:0001555,1.95e-07,116;UBERON:0007026,1.95e-07,116;UBERON:0000485,2.32e-07,11;UBERON:0004119,2.86e-07,118;UBERON:0000925,2.86e-07,118;UBERON:0006595,2.86e-07,118|phase1_expression=0,5.93258192986914,2.72999543633722,2.41971369045464,3.50627010962443,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,2.06468352960453,3.44539178469012,4.30761996159075,3.23206849028834,4.3705386474966,8.82105454159758,1.55211357458713,0,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0,3.79623249235609,0.658795818896044,0,0,0,2.69645822596266,6.26800344636613,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:21699556..21699564,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1529 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:21699556..21699564,- | |||
|description=CAGE_peak_at_chr4:21699556..21699564,- | |||
|id=chr4:21699556..21699564,- | |||
|ontology_enrichment_celltype=CL:0000239!1.46e-12!6;CL:0000677!1.46e-12!6;CL:0000212!1.46e-12!6;CL:0000584!1.46e-12!6;CL:0002563!1.83e-11!9;CL:0002251!1.83e-11!9;CL:0000075!1.01e-10!7;CL:0000473!5.39e-10!3;CL:0000627!5.39e-10!3;CL:0000682!5.39e-10!3;CL:0000066!2.59e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.82e-15,3;CL:0000239,2.36e-13,6;CL:0000677,2.36e-13,6;CL:0000584,2.36e-13,6;CL:0000075,1.78e-11,7;CL:0000066,5.45e-09,25;CL:0002563,5.77e-09,9;CL:0002251,5.77e-09,9;CL:0000473,6.45e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.24e-27!15;UBERON:0001242!5.70e-22!13;UBERON:0000060!5.70e-22!13;UBERON:0001262!5.70e-22!13;UBERON:0004786!5.70e-22!13;UBERON:0000160!1.76e-21!43;UBERON:0005409!2.99e-16!59;UBERON:0004923!6.03e-16!24;UBERON:0003350!1.83e-11!9;UBERON:0004808!1.83e-11!9;UBERON:0001277!1.83e-11!9;UBERON:0000331!3.82e-10!3;UBERON:0002116!3.82e-10!3;UBERON:0001204!3.82e-10!3;UBERON:0001168!3.82e-10!3;UBERON:0000485!2.91e-09!11;UBERON:0002465!4.56e-09!3;UBERON:0001007!1.30e-07!128;UBERON:0001555!1.30e-07!128;UBERON:0007026!1.30e-07!128;UBERON:0004119!2.02e-07!130;UBERON:0000925!2.02e-07!130;UBERON:0006595!2.02e-07!130;UBERON:0001962!9.70e-07!2;UBERON:0001961!9.70e-07!2;UBERON:0001744!9.70e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-29,31;UBERON:0000344,1.23e-25,15;UBERON:0001242,1.03e-23,13;UBERON:0001262,1.03e-23,13;UBERON:0004786,1.03e-23,13;UBERON:0005409,9.17e-19,47;UBERON:0000331,1.03e-15,3;UBERON:0002116,1.03e-15,3;UBERON:0001204,1.03e-15,3;UBERON:0001168,1.03e-15,3;UBERON:0004923,1.33e-15,24;UBERON:0002108,6.33e-12,4;UBERON:0003350,5.77e-09,9;UBERON:0004808,5.77e-09,9;UBERON:0001277,5.77e-09,9;UBERON:0001007,1.95e-07,116;UBERON:0001555,1.95e-07,116;UBERON:0007026,1.95e-07,116;UBERON:0000485,2.32e-07,11;UBERON:0004119,2.86e-07,118;UBERON:0000925,2.86e-07,118;UBERON:0006595,2.86e-07,118 | |||
|phase1_expression=0,5.93258192986914,2.72999543633722,2.41971369045464,3.50627010962443,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,2.06468352960453,3.44539178469012,4.30761996159075,3.23206849028834,4.3705386474966,8.82105454159758,1.55211357458713,0,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0,3.79623249235609,0.658795818896044,0,0,0,2.69645822596266,6.26800344636613,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:21699556..21699564,- | |||
}} |
Latest revision as of 08:40, 5 August 2015
Short description: | p@chr4:21699556..21699564, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:21699556..21699564, - |
Coexpression cluster: | MCL_coexpression_mm9:1529 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.82e-15 | 3 |
brush border epithelial cell | 2.36e-13 | 6 |
gut absorptive cell | 2.36e-13 | 6 |
enterocyte | 2.36e-13 | 6 |
columnar/cuboidal epithelial cell | 1.78e-11 | 7 |
epithelial cell | 5.45e-09 | 25 |
intestinal epithelial cell | 5.77e-09 | 9 |
epithelial cell of alimentary canal | 5.77e-09 | 9 |
defensive cell | 6.45e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.83e-29 | 31 |
mucosa | 1.23e-25 | 15 |
intestinal mucosa | 1.03e-23 | 13 |
wall of intestine | 1.03e-23 | 13 |
gastrointestinal system mucosa | 1.03e-23 | 13 |
gastrointestinal system | 9.17e-19 | 47 |
ileal mucosa | 1.03e-15 | 3 |
ileum | 1.03e-15 | 3 |
mucosa of small intestine | 1.03e-15 | 3 |
wall of small intestine | 1.03e-15 | 3 |
organ component layer | 1.33e-15 | 24 |
small intestine | 6.33e-12 | 4 |
epithelium of mucosa | 5.77e-09 | 9 |
gastrointestinal system epithelium | 5.77e-09 | 9 |
intestinal epithelium | 5.77e-09 | 9 |
digestive system | 1.95e-07 | 116 |
digestive tract | 1.95e-07 | 116 |
primitive gut | 1.95e-07 | 116 |
simple columnar epithelium | 2.32e-07 | 11 |
endoderm-derived structure | 2.86e-07 | 118 |
endoderm | 2.86e-07 | 118 |
presumptive endoderm | 2.86e-07 | 118 |