FFCP PHASE1:Mm9::chr5:139856586..139856661,+: Difference between revisions
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{{FFCP|EntrezGene=80290|HGNC=|UniProt=Q99LE2|association_with_transcript=0bp_to_NM_030258,uc009agm.2_5end|description=CAGE_peak_1_at_Gpr146_5end|id=chr5:139856586..139856661,+|ontology_enrichment_celltype=CL:0000219!8.86e-12!54;CL:0002320!3.73e-11!46;CL:0000134!3.73e-11!46;CL:0002031!1.10e-10!25;CL:0000988!8.18e-10!32;CL:0002032!8.18e-10!32;CL:0000037!8.18e-10!32;CL:0000566!8.18e-10!32;CL:0000837!8.18e-10!32;CL:0000839!2.31e-07!13;CL:0000049!2.76e-07!19;CL:0000763!6.00e-07!16;CL:0000414!9.21e-07!11|ontology_enrichment_celltype_v019_2=CL:0000219,8.83e-12,54;CL:0002320,3.72e-11,46;CL:0000134,3.72e-11,46;CL:0002031,1.10e-10,25;CL:0000988,8.16e-10,32;CL:0002032,8.16e-10,32;CL:0000037,8.16e-10,32;CL:0000837,8.16e-10,32;CL:0000839,2.30e-07,13;CL:0000049,2.75e-07,19;CL:0000763,5.99e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!7.39e-13!70;UBERON:0002384!3.73e-11!46;UBERON:0002365!4.61e-11!25;UBERON:0002330!4.61e-11!25;UBERON:0002107!1.07e-10!22;UBERON:0007499!1.07e-10!22;UBERON:0006925!1.07e-10!22;UBERON:0009497!1.07e-10!22;UBERON:0000015!1.07e-10!22;UBERON:0002423!1.07e-10!22;UBERON:0006235!1.07e-10!22;UBERON:0008835!1.07e-10!22;UBERON:0003894!1.07e-10!22;UBERON:0004161!1.07e-10!22;UBERON:0008836!1.07e-10!22;UBERON:0009854!3.70e-10!23;UBERON:0009856!3.70e-10!23;UBERON:0003914!7.78e-10!47;UBERON:0005172!4.05e-08!49;UBERON:0005173!4.05e-08!49;UBERON:0002417!4.05e-08!49;UBERON:0000916!4.05e-08!49;UBERON:0005057!2.15e-07!51;UBERON:0002371!2.17e-07!16;UBERON:0009569!2.65e-07!66;UBERON:0001474!4.41e-07!22;UBERON:0004765!4.41e-07!22;UBERON:0001434!4.41e-07!22;UBERON:0000477!5.01e-07!154;UBERON:0002204!9.99e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.72e-11,46;UBERON:0002365,4.60e-11,25;UBERON:0002330,4.60e-11,25;UBERON:0002107,1.06e-10,22;UBERON:0007499,1.06e-10,22;UBERON:0006925,1.06e-10,22;UBERON:0009497,1.06e-10,22;UBERON:0000015,1.06e-10,22;UBERON:0002423,1.06e-10,22;UBERON:0006235,1.06e-10,22;UBERON:0008835,1.06e-10,22;UBERON:0003894,1.06e-10,22;UBERON:0004161,1.06e-10,22;UBERON:0008836,1.06e-10,22;UBERON:0009854,3.70e-10,23;UBERON:0009856,3.70e-10,23;UBERON:0003914,7.76e-10,47;UBERON:0005172,4.05e-08,49;UBERON:0005173,4.05e-08,49;UBERON:0002417,4.05e-08,49;UBERON:0000916,4.05e-08,49;UBERON:0002371,2.17e-07,16;UBERON:0009569,2.63e-07,66;UBERON:0001474,4.40e-07,22;UBERON:0004765,4.40e-07,22;UBERON:0001434,4.40e-07,22;UBERON:0005256,5.72e-07,45;UBERON:0003104,6.38e-07,61;UBERON:0009142,6.38e-07,61;UBERON:0002204,9.98e-07,32|phase1_expression=7.52699581392532,2.79180326111489,8.64498554840118,1.20985684522732,0,3.02182689441402,1.16806320297763,109.883948248781,47.8681655315667,92.6895524235094,9.75942418885378,7.8974437405383,82.1763503669788,93.6272509907462,35.3096347524602,38.4703008040669,63.6601309096613,34.543107106727,37.1580115071552,36.4975100546306,23.0467316309399,42.0000723579745,35.7843711120341,7.03966660290989,7.11168771308227,3.44539178469012,3.4460959692726,2.15471232685889,1.33016393619462,0.504060259519861,1.77384408524244,38.1018404075779,46.1298590688428,63.3926724061755,0.577703239502549,0.664938581433969,0.816677425049476,17.5783284909501,21.0960543021426,4.18818995179039,22.9410280332096,28.0048648832963,13.1087795318411,17.877348152532,15.0037858204882,17.0698479510364,5.47673941043627,50.3638111238831,43.2781779986909,54.4403717407993,19.1781397626747,34.5006154475932,10.0669563634642,73.2615763431458,59.1525086490737,4.3734104126111,13.1805382371828,17.532851137433,1.41621522601718,1.05798195854407,4.43681982454325,3.72728985276045,7.11435836888911,69.7422280893084,99.8755026192644,98.7567359775079,50.0332184565736,59.9380556301625,0.311068836925433,0.270011876663381,0.841299845405528,9.42648248532552,10.1599528837742,0.61245399607477,0.383381884072945,0,23.1243350098716,17.2377906415003,13.2101618600369,1.18697658957174,1.37231465403614,0.52091337055676,15.0758819460746,19.1339287410771,16.9606055032259,7.36571463684169,4.9830088279686,2.23679334990361,5.14938114665652,9.82430281388212,117.39511792418,87.7632354521014,36.7184520202185,74.4790404460188,115.660202305685,159.497571806651,44.6613256018971,1.53387290320252,1.81850203222008,1.7666978725517,11.4083170019111,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,1.01104889002957,31.9714863213368,37.0281173615456,30.7275227864187,3.29622120855658,5.78484408793068,7.14908041493781,6.17962826265753,9.8774513993992,15.8339905075391,70.4505658042966,52.0557684911682,31.8459798701955,11.1619126463712,25.1759331044849,23.2740121504907,9.31958806090611,19.6163133997737,19.2690970268379,6.64188343542338,21.5667224110656,22.7963037777495,17.5356913360829,21.8694333531041,34.7700458142156,2.51308704225729,21.2065670634577,18.9229438424445,19.7398642331582,19.9556753573342,5.09196819251581,24.2593592689681,9.35074206204597,9.25944165900485,3.513251959993,3.90833577536904,3.96136685571768,7.08312643827861,9.86529237694254,8.07116437794554,8.05834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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80290 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99LE2 | |||
|association_with_transcript=0bp_to_NM_030258,uc009agm.2_5end | |||
|cluster_id=chr5:139856586..139856661,+ | |||
|description=CAGE_peak_1_at_Gpr146_5end | |||
|id=chr5:139856586..139856661,+ | |||
|ontology_enrichment_celltype=CL:0000219!8.86e-12!54;CL:0002320!3.73e-11!46;CL:0000134!3.73e-11!46;CL:0002031!1.10e-10!25;CL:0000988!8.18e-10!32;CL:0002032!8.18e-10!32;CL:0000037!8.18e-10!32;CL:0000566!8.18e-10!32;CL:0000837!8.18e-10!32;CL:0000839!2.31e-07!13;CL:0000049!2.76e-07!19;CL:0000763!6.00e-07!16;CL:0000414!9.21e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,8.83e-12,54;CL:0002320,3.72e-11,46;CL:0000134,3.72e-11,46;CL:0002031,1.10e-10,25;CL:0000988,8.16e-10,32;CL:0002032,8.16e-10,32;CL:0000037,8.16e-10,32;CL:0000837,8.16e-10,32;CL:0000839,2.30e-07,13;CL:0000049,2.75e-07,19;CL:0000763,5.99e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.39e-13!70;UBERON:0002384!3.73e-11!46;UBERON:0002365!4.61e-11!25;UBERON:0002330!4.61e-11!25;UBERON:0002107!1.07e-10!22;UBERON:0007499!1.07e-10!22;UBERON:0006925!1.07e-10!22;UBERON:0009497!1.07e-10!22;UBERON:0000015!1.07e-10!22;UBERON:0002423!1.07e-10!22;UBERON:0006235!1.07e-10!22;UBERON:0008835!1.07e-10!22;UBERON:0003894!1.07e-10!22;UBERON:0004161!1.07e-10!22;UBERON:0008836!1.07e-10!22;UBERON:0009854!3.70e-10!23;UBERON:0009856!3.70e-10!23;UBERON:0003914!7.78e-10!47;UBERON:0005172!4.05e-08!49;UBERON:0005173!4.05e-08!49;UBERON:0002417!4.05e-08!49;UBERON:0000916!4.05e-08!49;UBERON:0005057!2.15e-07!51;UBERON:0002371!2.17e-07!16;UBERON:0009569!2.65e-07!66;UBERON:0001474!4.41e-07!22;UBERON:0004765!4.41e-07!22;UBERON:0001434!4.41e-07!22;UBERON:0000477!5.01e-07!154;UBERON:0002204!9.99e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.72e-11,46;UBERON:0002365,4.60e-11,25;UBERON:0002330,4.60e-11,25;UBERON:0002107,1.06e-10,22;UBERON:0007499,1.06e-10,22;UBERON:0006925,1.06e-10,22;UBERON:0009497,1.06e-10,22;UBERON:0000015,1.06e-10,22;UBERON:0002423,1.06e-10,22;UBERON:0006235,1.06e-10,22;UBERON:0008835,1.06e-10,22;UBERON:0003894,1.06e-10,22;UBERON:0004161,1.06e-10,22;UBERON:0008836,1.06e-10,22;UBERON:0009854,3.70e-10,23;UBERON:0009856,3.70e-10,23;UBERON:0003914,7.76e-10,47;UBERON:0005172,4.05e-08,49;UBERON:0005173,4.05e-08,49;UBERON:0002417,4.05e-08,49;UBERON:0000916,4.05e-08,49;UBERON:0002371,2.17e-07,16;UBERON:0009569,2.63e-07,66;UBERON:0001474,4.40e-07,22;UBERON:0004765,4.40e-07,22;UBERON:0001434,4.40e-07,22;UBERON:0005256,5.72e-07,45;UBERON:0003104,6.38e-07,61;UBERON:0009142,6.38e-07,61;UBERON:0002204,9.98e-07,32 | |||
|phase1_expression=7.52699581392532,2.79180326111489,8.64498554840118,1.20985684522732,0,3.02182689441402,1.16806320297763,109.883948248781,47.8681655315667,92.6895524235094,9.75942418885378,7.8974437405383,82.1763503669788,93.6272509907462,35.3096347524602,38.4703008040669,63.6601309096613,34.543107106727,37.1580115071552,36.4975100546306,23.0467316309399,42.0000723579745,35.7843711120341,7.03966660290989,7.11168771308227,3.44539178469012,3.4460959692726,2.15471232685889,1.33016393619462,0.504060259519861,1.77384408524244,38.1018404075779,46.1298590688428,63.3926724061755,0.577703239502549,0.664938581433969,0.816677425049476,17.5783284909501,21.0960543021426,4.18818995179039,22.9410280332096,28.0048648832963,13.1087795318411,17.877348152532,15.0037858204882,17.0698479510364,5.47673941043627,50.3638111238831,43.2781779986909,54.4403717407993,19.1781397626747,34.5006154475932,10.0669563634642,73.2615763431458,59.1525086490737,4.3734104126111,13.1805382371828,17.532851137433,1.41621522601718,1.05798195854407,4.43681982454325,3.72728985276045,7.11435836888911,69.7422280893084,99.8755026192644,98.7567359775079,50.0332184565736,59.9380556301625,0.311068836925433,0.270011876663381,0.841299845405528,9.42648248532552,10.1599528837742,0.61245399607477,0.383381884072945,0,23.1243350098716,17.2377906415003,13.2101618600369,1.18697658957174,1.37231465403614,0.52091337055676,15.0758819460746,19.1339287410771,16.9606055032259,7.36571463684169,4.9830088279686,2.23679334990361,5.14938114665652,9.82430281388212,117.39511792418,87.7632354521014,36.7184520202185,74.4790404460188,115.660202305685,159.497571806651,44.6613256018971,1.53387290320252,1.81850203222008,1.7666978725517,11.4083170019111,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,1.01104889002957,31.9714863213368,37.0281173615456,30.7275227864187,3.29622120855658,5.78484408793068,7.14908041493781,6.17962826265753,9.8774513993992,15.8339905075391,70.4505658042966,52.0557684911682,31.8459798701955,11.1619126463712,25.1759331044849,23.2740121504907,9.31958806090611,19.6163133997737,19.2690970268379,6.64188343542338,21.5667224110656,22.7963037777495,17.5356913360829,21.8694333531041,34.7700458142156,2.51308704225729,21.2065670634577,18.9229438424445,19.7398642331582,19.9556753573342,5.09196819251581,24.2593592689681,9.35074206204597,9.25944165900485,3.513251959993,3.90833577536904,3.96136685571768,7.08312643827861,9.86529237694254,8.07116437794554,8.05834831213668,17.8505325809921,1.72454394346274,2.64748512234947,1.75951124163949,1.53437012699302,1.39023624612799,3.1342694986995,3.08673204611915,3.58261680273288,17.5553296828309,12.8673953557358,14.2081749697796,7.87077935634907,8.20841209933837,5.94204802821349,6.15536312521547,9.83821158737019,8.02188987014367,14.8821724640261,15.8281306825775,30.1254583307297,19.7471819896177,33.8184976002936,63.5579466839509,63.3045945551689,48.5205754793222,63.882255329937,19.1363853193356,3.80747065803352,4.29544417878937,2.3800550999719,1.70630600428187,3.48355007790658,3.09281907173024,2.01683524623343,4.00280478920767,3.23383564391351,5.69434873853414,3.62337700392824,7.28872105520782,7.36138946552258,2.53453313254856,6.29173586057955,3.02593269824572,3.38540164532424,4.93136542478012,4.22719496655997,11.270773567308,6.31319116320474,10.0855293327165,13.8868923382831,14.4811670014549,23.4700135287567,29.5157608341785,34.1810144063387,96.9400090574977,19.520877368783,20.6386944868863,24.7348323623339,32.254759300772,39.3118770396439,34.8837416940545,45.7436858546789,36.9668317047081,23.3377201209869,20.1275489138296,40.1912223481984,37.7565584468618,64.9127716324077,66.1976455895856,72.8489717258684,96.4411652669676,2.4633883530163,2.60743962307241,3.90413697282933,4.22442446919304,13.2329943379034,22.8521895250573,35.5143239101194,21.7536498866544,26.3542980682042,24.0776700672806,66.8562324040211,44.5527253214011,54.9666422609744,67.8560777726725,77.2346071022568,46.2258416637894,18.7636987487218,21.5137790583641,19.9259867206745,0.655739781506702,43.6774704063565,11.9893123378178,10.5418460960092,16.1567548299599,16.9667846546312,14.704712489438,12.7384438854975,16.5972387686707,13.4437694639203,10.6727700045561,12.5315313404505,15.6134093729095,5.87616492101942,7.98146100832523,21.7760562323747,15.9294166007955,3.15614827001476,2.41858845571801,2.45186603682668,3.83892460745005,3.07435147943927,5.42699415653264,4.36240475373007,3.20847640546249,9.16506598013866,9.48767477174989,6.18813259489121,29.9586853063333,2.52085531643834,2.19909762430683,3.64372959553707,4.61084607469911,8.02659679209317,9.70839221552514,21.0080814889074,24.8752010547533,23.9370240076117,9.92377791247329,20.940554123568,7.91175690809937,4.28221766989907,5.37175548014114,4.26766339337159,4.66369338607761,23.3635880533242,38.9585608219104,10.7321171340876,18.1490636822317,33.1528484328256,38.5477722173291,35.6893950202175,36.8853193086666,35.4077174378855,55.0035895741607,11.4560474161814,1.42351197111511,4.06638934253697,1.83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| |||
|short_description=p1@Gpr146 | |||
}} |
Revision as of 22:59, 3 August 2015
Short description: | p1@Gpr146 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr146_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_030258, uc009agm.2_5end |
EntrezGene: | 80290 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 8.83e-12 | 54 |
connective tissue cell | 3.72e-11 | 46 |
mesenchymal cell | 3.72e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 1.10e-10 | 25 |
hematopoietic cell | 8.16e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.16e-10 | 32 |
hematopoietic stem cell | 8.16e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.16e-10 | 32 |
myeloid lineage restricted progenitor cell | 2.30e-07 | 13 |
common myeloid progenitor | 2.75e-07 | 19 |
myeloid cell | 5.99e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.72e-11 | 46 |
exocrine gland | 4.60e-11 | 25 |
exocrine system | 4.60e-11 | 25 |
liver | 1.06e-10 | 22 |
epithelial sac | 1.06e-10 | 22 |
digestive gland | 1.06e-10 | 22 |
epithelium of foregut-midgut junction | 1.06e-10 | 22 |
anatomical boundary | 1.06e-10 | 22 |
hepatobiliary system | 1.06e-10 | 22 |
foregut-midgut junction | 1.06e-10 | 22 |
hepatic diverticulum | 1.06e-10 | 22 |
liver primordium | 1.06e-10 | 22 |
septum transversum | 1.06e-10 | 22 |
liver bud | 1.06e-10 | 22 |
digestive tract diverticulum | 3.70e-10 | 23 |
sac | 3.70e-10 | 23 |
epithelial tube | 7.76e-10 | 47 |
abdomen element | 4.05e-08 | 49 |
abdominal segment element | 4.05e-08 | 49 |
abdominal segment of trunk | 4.05e-08 | 49 |
abdomen | 4.05e-08 | 49 |
bone marrow | 2.17e-07 | 16 |
subdivision of trunk | 2.63e-07 | 66 |
bone element | 4.40e-07 | 22 |
skeletal element | 4.40e-07 | 22 |
skeletal system | 4.40e-07 | 22 |
trunk mesenchyme | 5.72e-07 | 45 |
mesenchyme | 6.38e-07 | 61 |
entire embryonic mesenchyme | 6.38e-07 | 61 |
musculoskeletal system | 9.98e-07 | 32 |