FFCP PHASE1:Mm9::chr6:136610311..136610330,-: Difference between revisions
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{{FFCP|EntrezGene=66857|HGNC=|UniProt=|association_with_transcript=63bp_to_ENSMUST00000137139_5end|description=CAGE_peak_6_at_Plbd1_5end|id=chr6:136610311..136610330,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.83e-11!130;UBERON:0000925!2.83e-11!130;UBERON:0006595!2.83e-11!130;UBERON:0004923!1.10e-10!24;UBERON:0001007!1.62e-10!128;UBERON:0001555!1.62e-10!128;UBERON:0007026!1.62e-10!128;UBERON:0004921!1.50e-09!126;UBERON:0004185!1.50e-09!126;UBERON:0005409!7.50e-09!59|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.26e-17,47;UBERON:0004923,5.64e-15,24;UBERON:0000160,8.83e-14,31;UBERON:0004119,6.97e-12,118;UBERON:0000925,6.97e-12,118;UBERON:0006595,6.97e-12,118;UBERON:0001007,7.87e-11,116;UBERON:0001555,7.87e-11,116;UBERON:0007026,7.87e-11,116;UBERON:0004921,1.65e-09,114;UBERON:0000344,3.08e-09,15;UBERON:0000014,2.89e-07,5;UBERON:0001003,2.89e-07,5;UBERON:0002097,2.89e-07,5;UBERON:0002199,2.89e-07,5;UBERON:0007029,2.89e-07,5;UBERON:0007376,2.89e-07,5;UBERON:0002416,2.89e-07,5;UBERON:0007383,2.89e-07,5;UBERON:0001242,4.24e-07,13;UBERON:0001262,4.24e-07,13;UBERON:0004786,4.24e-07,13|phase1_expression=0,3.48975407639361,6.82498859084304,6.0492842261366,8.01433167914156,0,0.700837921786577,0,0,0,0,0,0,0,3.33109761815663,1.21485160433896,2.79824751251259,2.20823515750766,2.19383093769182,1.69755860719212,0.595303031057488,0,0,8.95957567643077,11.6998733344257,3.44539178469012,1.7230479846363,4.09395342103189,3.99049180858385,3.02436155711917,2.21730510655305,0,0,0,1.1554064790051,0.166234645358492,1.02084678131185,22.1821764290561,10.1573594788094,17.7998072951091,29.4115744015507,17.0761371239611,26.7030694167134,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,1.3599426674155,1.07940638327563,0,0.896053774194671,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.59857431606684,7.25026074212081,0.742210695324124,0,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.879666139307728,0.494389935468748,2.74738778147832,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,3.83185582812887,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.439100230582101,0.805238512562231,0,0,1.32167513193519,3.96675849995316,0,0,0,0,0.444756087689741,1.33157938278791,4.74529061544512,4.28217282282428,5.52937459360593,3.78017296878187,5.26403035221624,7.19055526923377,6.26800344636613,5.97423819763102,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,0,0,0.224862112384854,1.01430060694251,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.823684239564244,0,1.86070473834252,0.936113019343682,0.252578877947112,0.358794827043824,0,1.47802552133284,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,1.32878813789265,0.637819074629948,1.3109065177259,1.72684981865896,1.3018415272336,0,0.54390568381871,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0.395287777946524,0,1.56134093729095,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.90648863777438,0,6.92522262354216,4.19807509409354,4.28221766989907,12.6534684643325,16.085808175016,4.95517422270746,0,7.34744787430767,1.857481811669,1.48155621895769,3.20226376907975,2.7338845544205,3.88922894451088,0,0.139951452323658,0,3.81868247206045,0,0.203319467126849,0.432021363287205,0.836353184057875,0.655087691238533,1.07891477107857,1.07449492442937,1.57053565190418,0.388844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0,0.821500670520278,0,0,0,0.288030006257865,3.79213344753814,0.608175645870493,0.205421914329655,0.909445760844565,0.716106782669926,0.993406773906324,1.56254084375959,0.590758108698309,0.403865799792591,0.381034033274999,0.604957110821043,1.55932609183604,0.962118416403295,1.05189211963412,4.76133805591944,0,0,0.839423081820392,0.772758376128762,0.563047426353546,0.183151624267265,4.07299920250225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0.735374033800057,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.70990322463735,0,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0,0,0.409231043169689,0,1.35034627686799,1.24905288968973,0.935726433781634,1.07435527024149,0.382576664137687,2.20591419119516,0.463735671240843|short_description=p6@Plbd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66857 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=63bp_to_ENSMUST00000137139_5end | |||
|cluster_id=chr6:136610311..136610330,- | |||
|description=CAGE_peak_6_at_Plbd1_5end | |||
|id=chr6:136610311..136610330,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.83e-11!130;UBERON:0000925!2.83e-11!130;UBERON:0006595!2.83e-11!130;UBERON:0004923!1.10e-10!24;UBERON:0001007!1.62e-10!128;UBERON:0001555!1.62e-10!128;UBERON:0007026!1.62e-10!128;UBERON:0004921!1.50e-09!126;UBERON:0004185!1.50e-09!126;UBERON:0005409!7.50e-09!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.26e-17,47;UBERON:0004923,5.64e-15,24;UBERON:0000160,8.83e-14,31;UBERON:0004119,6.97e-12,118;UBERON:0000925,6.97e-12,118;UBERON:0006595,6.97e-12,118;UBERON:0001007,7.87e-11,116;UBERON:0001555,7.87e-11,116;UBERON:0007026,7.87e-11,116;UBERON:0004921,1.65e-09,114;UBERON:0000344,3.08e-09,15;UBERON:0000014,2.89e-07,5;UBERON:0001003,2.89e-07,5;UBERON:0002097,2.89e-07,5;UBERON:0002199,2.89e-07,5;UBERON:0007029,2.89e-07,5;UBERON:0007376,2.89e-07,5;UBERON:0002416,2.89e-07,5;UBERON:0007383,2.89e-07,5;UBERON:0001242,4.24e-07,13;UBERON:0001262,4.24e-07,13;UBERON:0004786,4.24e-07,13 | |||
|phase1_expression=0,3.48975407639361,6.82498859084304,6.0492842261366,8.01433167914156,0,0.700837921786577,0,0,0,0,0,0,0,3.33109761815663,1.21485160433896,2.79824751251259,2.20823515750766,2.19383093769182,1.69755860719212,0.595303031057488,0,0,8.95957567643077,11.6998733344257,3.44539178469012,1.7230479846363,4.09395342103189,3.99049180858385,3.02436155711917,2.21730510655305,0,0,0,1.1554064790051,0.166234645358492,1.02084678131185,22.1821764290561,10.1573594788094,17.7998072951091,29.4115744015507,17.0761371239611,26.7030694167134,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,1.3599426674155,1.07940638327563,0,0.896053774194671,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.59857431606684,7.25026074212081,0.742210695324124,0,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.879666139307728,0.494389935468748,2.74738778147832,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,3.83185582812887,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.439100230582101,0.805238512562231,0,0,1.32167513193519,3.96675849995316,0,0,0,0,0.444756087689741,1.33157938278791,4.74529061544512,4.28217282282428,5.52937459360593,3.78017296878187,5.26403035221624,7.19055526923377,6.26800344636613,5.97423819763102,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,0,0,0.224862112384854,1.01430060694251,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.823684239564244,0,1.86070473834252,0.936113019343682,0.252578877947112,0.358794827043824,0,1.47802552133284,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,1.32878813789265,0.637819074629948,1.3109065177259,1.72684981865896,1.3018415272336,0,0.54390568381871,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0.395287777946524,0,1.56134093729095,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.90648863777438,0,6.92522262354216,4.19807509409354,4.28221766989907,12.6534684643325,16.085808175016,4.95517422270746,0,7.34744787430767,1.857481811669,1.48155621895769,3.20226376907975,2.7338845544205,3.88922894451088,0,0.139951452323658,0,3.81868247206045,0,0.203319467126849,0.432021363287205,0.836353184057875,0.655087691238533,1.07891477107857,1.07449492442937,1.57053565190418,0.388844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0,0.821500670520278,0,0,0,0.288030006257865,3.79213344753814,0.608175645870493,0.205421914329655,0.909445760844565,0.716106782669926,0.993406773906324,1.56254084375959,0.590758108698309,0.403865799792591,0.381034033274999,0.604957110821043,1.55932609183604,0.962118416403295,1.05189211963412,4.76133805591944,0,0,0.839423081820392,0.772758376128762,0.563047426353546,0.183151624267265,4.07299920250225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0.735374033800057,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.70990322463735,0,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0,0,0.409231043169689,0,1.35034627686799,1.24905288968973,0.935726433781634,1.07435527024149,0.382576664137687,2.20591419119516,0.463735671240843 | |||
|short_description=p6@Plbd1 | |||
}} |
Revision as of 08:04, 5 August 2015
Short description: | p6@Plbd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Plbd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_ENSMUST00000137139_5end |
EntrezGene: | 66857 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.26e-17 | 47 |
organ component layer | 5.64e-15 | 24 |
intestine | 8.83e-14 | 31 |
endoderm-derived structure | 6.97e-12 | 118 |
endoderm | 6.97e-12 | 118 |
presumptive endoderm | 6.97e-12 | 118 |
digestive system | 7.87e-11 | 116 |
digestive tract | 7.87e-11 | 116 |
primitive gut | 7.87e-11 | 116 |
subdivision of digestive tract | 1.65e-09 | 114 |
mucosa | 3.08e-09 | 15 |
zone of skin | 2.89e-07 | 5 |
skin epidermis | 2.89e-07 | 5 |
skin of body | 2.89e-07 | 5 |
integument | 2.89e-07 | 5 |
surface | 2.89e-07 | 5 |
outer epithelium | 2.89e-07 | 5 |
integumental system | 2.89e-07 | 5 |
enveloping layer of ectoderm | 2.89e-07 | 5 |
intestinal mucosa | 4.24e-07 | 13 |
wall of intestine | 4.24e-07 | 13 |
gastrointestinal system mucosa | 4.24e-07 | 13 |