FFCP PHASE1:Mm9::chr6:37391910..37391928,-: Difference between revisions
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{{FFCP|EntrezGene=208647|HGNC=|MCL_coexpression_id=24|UniProt=Q8BH52|association_with_transcript=217bp_to_ENSMUST00000041093_5end|description=CAGE_peak_3_at_Creb3l2_5end|id=chr6:37391910..37391928,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.18e-21,6;CL:0000677,1.18e-21,6;CL:0000584,1.18e-21,6;CL:0000075,1.75e-18,7;CL:0002563,3.02e-14,9;CL:0002251,3.02e-14,9;CL:0000066,8.23e-13,25;CL:0000682,9.75e-12,3;CL:0002076,2.67e-08,15;CL:0000223,5.67e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.01e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.76e-23,31;UBERON:0000344,2.37e-22,15;UBERON:0004923,5.68e-19,24;UBERON:0001242,7.19e-17,13;UBERON:0001262,7.19e-17,13;UBERON:0004786,7.19e-17,13;UBERON:0005409,2.91e-14,47;UBERON:0003350,3.02e-14,9;UBERON:0004808,3.02e-14,9;UBERON:0001277,3.02e-14,9;UBERON:0000485,1.52e-11,11;UBERON:0004119,4.11e-08,118;UBERON:0000925,4.11e-08,118;UBERON:0006595,4.11e-08,118;UBERON:0001962,8.88e-08,2;UBERON:0001961,8.88e-08,2;UBERON:0001744,8.88e-08,2;UBERON:0001987,2.82e-07,2;UBERON:0003124,2.82e-07,2;UBERON:0004340,2.82e-07,2|phase1_expression=0,16.40184415905,18.654968814971,12.7034968748869,24.543890767371,2.18243053485457,2.33612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,2.75291137280604,11.4846392823004,8.18447792702242,6.67960821326256,0.190023419456374,2.52030129759931,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,1.25602267690966,0.517875767294343,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0,0.722996784599558,0,0,0,0,0,0,0.209446706813455,6.38642638021478,0.239630249011841,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.407357455401265,0,0.505445516867349,0.631325567659422,0.130120442962704,0,0.540186389416048,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,0,0,12.2254949704005,6.08236303326152,0.213288250535234,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.988193728344065,0.754005626400808,0.198956472041151,0.19496408711912,6.29173586057955,4.97117514711797,5.17767310461355,0.189667900953082,0.114248512609729,0,0.203651327845314,0.969762435838129,0.420814919341911,0.189709611372772,0.442830443938806,0.784993639206874,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,1.40803024838226,1.0591603543191,0,0,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,2.04036585640896,0.370850604021019,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.464810523557898,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p3@Creb3l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:208647 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BH52 | |||
|association_with_transcript=217bp_to_ENSMUST00000041093_5end | |||
|cluster_id=chr6:37391910..37391928,- | |||
|description=CAGE_peak_3_at_Creb3l2_5end | |||
|id=chr6:37391910..37391928,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.18e-21,6;CL:0000677,1.18e-21,6;CL:0000584,1.18e-21,6;CL:0000075,1.75e-18,7;CL:0002563,3.02e-14,9;CL:0002251,3.02e-14,9;CL:0000066,8.23e-13,25;CL:0000682,9.75e-12,3;CL:0002076,2.67e-08,15;CL:0000223,5.67e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.01e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.76e-23,31;UBERON:0000344,2.37e-22,15;UBERON:0004923,5.68e-19,24;UBERON:0001242,7.19e-17,13;UBERON:0001262,7.19e-17,13;UBERON:0004786,7.19e-17,13;UBERON:0005409,2.91e-14,47;UBERON:0003350,3.02e-14,9;UBERON:0004808,3.02e-14,9;UBERON:0001277,3.02e-14,9;UBERON:0000485,1.52e-11,11;UBERON:0004119,4.11e-08,118;UBERON:0000925,4.11e-08,118;UBERON:0006595,4.11e-08,118;UBERON:0001962,8.88e-08,2;UBERON:0001961,8.88e-08,2;UBERON:0001744,8.88e-08,2;UBERON:0001987,2.82e-07,2;UBERON:0003124,2.82e-07,2;UBERON:0004340,2.82e-07,2 | |||
|phase1_expression=0,16.40184415905,18.654968814971,12.7034968748869,24.543890767371,2.18243053485457,2.33612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,2.75291137280604,11.4846392823004,8.18447792702242,6.67960821326256,0.190023419456374,2.52030129759931,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,1.25602267690966,0.517875767294343,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0,0.722996784599558,0,0,0,0,0,0,0.209446706813455,6.38642638021478,0.239630249011841,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.407357455401265,0,0.505445516867349,0.631325567659422,0.130120442962704,0,0.540186389416048,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,0,0,12.2254949704005,6.08236303326152,0.213288250535234,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.988193728344065,0.754005626400808,0.198956472041151,0.19496408711912,6.29173586057955,4.97117514711797,5.17767310461355,0.189667900953082,0.114248512609729,0,0.203651327845314,0.969762435838129,0.420814919341911,0.189709611372772,0.442830443938806,0.784993639206874,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,1.40803024838226,1.0591603543191,0,0,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,2.04036585640896,0.370850604021019,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.464810523557898,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Creb3l2 | |||
}} |
Revision as of 15:30, 5 August 2015
Short description: | p3@Creb3l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Creb3l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 217bp_to_ENSMUST00000041093_5end |
EntrezGene: | 208647 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.18e-21 | 6 |
gut absorptive cell | 1.18e-21 | 6 |
enterocyte | 1.18e-21 | 6 |
columnar/cuboidal epithelial cell | 1.75e-18 | 7 |
intestinal epithelial cell | 3.02e-14 | 9 |
epithelial cell of alimentary canal | 3.02e-14 | 9 |
epithelial cell | 8.23e-13 | 25 |
M cell of gut | 9.75e-12 | 3 |
endo-epithelial cell | 2.67e-08 | 15 |
endodermal cell | 5.67e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.76e-23 | 31 |
mucosa | 2.37e-22 | 15 |
organ component layer | 5.68e-19 | 24 |
intestinal mucosa | 7.19e-17 | 13 |
wall of intestine | 7.19e-17 | 13 |
gastrointestinal system mucosa | 7.19e-17 | 13 |
gastrointestinal system | 2.91e-14 | 47 |
epithelium of mucosa | 3.02e-14 | 9 |
gastrointestinal system epithelium | 3.02e-14 | 9 |
intestinal epithelium | 3.02e-14 | 9 |
simple columnar epithelium | 1.52e-11 | 11 |
endoderm-derived structure | 4.11e-08 | 118 |
endoderm | 4.11e-08 | 118 |
presumptive endoderm | 4.11e-08 | 118 |
gut-associated lymphoid tissue | 8.88e-08 | 2 |
mucosa-associated lymphoid tissue | 8.88e-08 | 2 |
lymphoid tissue | 8.88e-08 | 2 |
placenta | 2.82e-07 | 2 |
chorion | 2.82e-07 | 2 |
allantois | 2.82e-07 | 2 |