FFCP PHASE1:Mm9::chr7:104629416..104629427,+: Difference between revisions
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{{FFCP|EntrezGene=101861|HGNC=|MCL_coexpression_id=18|UniProt=Q8CIM8|association_with_transcript=-38bp_to_ENSMUST00000026126,NM_027256,uc009ijg.2,uc009ijh.2,uc009iji.2_5end|description=CAGE_peak_4_at_Ints4_5end|id=chr7:104629416..104629427,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,9.93e-29,6;CL:0000556,9.93e-29,6;CL:0000050,3.43e-19,9;CL:0000839,2.68e-13,13;CL:0000763,8.39e-11,16;CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3;CL:0002031,1.02e-09,25;CL:0000049,4.33e-09,19;CL:0000945,2.54e-08,1;CL:0000236,2.54e-08,1;CL:0000826,2.54e-08,1;CL:0000988,1.61e-07,32;CL:0002032,1.61e-07,32;CL:0000037,1.61e-07,32;CL:0000837,1.61e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.63e-07!48;UBERON:0004177!4.91e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.39e-11,16;UBERON:0002193,1.02e-10,48;UBERON:0002405,1.02e-10,48;UBERON:0002106,1.28e-10,6;UBERON:0004457,1.28e-10,6;UBERON:0000042,1.28e-10,6;UBERON:0004854,1.28e-10,6;UBERON:0009034,1.28e-10,6;UBERON:0002095,1.28e-10,6;UBERON:0004782,1.28e-10,6;UBERON:0003281,1.28e-10,6;UBERON:0009664,1.28e-10,6;UBERON:0002296,1.28e-10,6;UBERON:0005602,1.28e-10,6;UBERON:0001179,1.28e-10,6;UBERON:0006293,1.28e-10,6;UBERON:0002390,5.08e-09,45;UBERON:0003061,5.08e-09,45;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0001474,7.70e-08,22;UBERON:0004765,7.70e-08,22;UBERON:0001434,7.70e-08,22;UBERON:0002204,2.07e-07,32|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0,0.68487187290202,0.478632953972018,0.856003649656029,0.0874204024189974,0.999329285446988,2.02475267389826,1.39912375625629,8.04428521663506,7.81552271552711,3.81950686618227,0.340173160604279,0.198581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,3.88406825470758,0.148442139064825,0,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0.359445373517761,0,0.508280908292259,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.431135985865684,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0.500535317148282,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.739012760666419,0.189491411770485,0,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,1.47529281905711,0.275936746304732,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,1.19609616558497,0,0.370389054739423,0.941842285023455,1.50363650493128,2.74533807847827,0.169978429993855,0.419854356970974,0.414599921413271,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.841368146639782,0.590758108698309,0.605798699688886,0.609654453239999,0.403304740547362,0.974578807397524,0.673482891482306,0.584384510907845,0.226730383615211,0.221985953374065,2.06341870201794,0.503653849092235,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p4@Ints4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:101861 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CIM8 | |||
|association_with_transcript=-38bp_to_ENSMUST00000026126,NM_027256,uc009ijg.2,uc009ijh.2,uc009iji.2_5end | |||
|cluster_id=chr7:104629416..104629427,+ | |||
|description=CAGE_peak_4_at_Ints4_5end | |||
|id=chr7:104629416..104629427,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.93e-29,6;CL:0000556,9.93e-29,6;CL:0000050,3.43e-19,9;CL:0000839,2.68e-13,13;CL:0000763,8.39e-11,16;CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3;CL:0002031,1.02e-09,25;CL:0000049,4.33e-09,19;CL:0000945,2.54e-08,1;CL:0000236,2.54e-08,1;CL:0000826,2.54e-08,1;CL:0000988,1.61e-07,32;CL:0002032,1.61e-07,32;CL:0000037,1.61e-07,32;CL:0000837,1.61e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.63e-07!48;UBERON:0004177!4.91e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.39e-11,16;UBERON:0002193,1.02e-10,48;UBERON:0002405,1.02e-10,48;UBERON:0002106,1.28e-10,6;UBERON:0004457,1.28e-10,6;UBERON:0000042,1.28e-10,6;UBERON:0004854,1.28e-10,6;UBERON:0009034,1.28e-10,6;UBERON:0002095,1.28e-10,6;UBERON:0004782,1.28e-10,6;UBERON:0003281,1.28e-10,6;UBERON:0009664,1.28e-10,6;UBERON:0002296,1.28e-10,6;UBERON:0005602,1.28e-10,6;UBERON:0001179,1.28e-10,6;UBERON:0006293,1.28e-10,6;UBERON:0002390,5.08e-09,45;UBERON:0003061,5.08e-09,45;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0001474,7.70e-08,22;UBERON:0004765,7.70e-08,22;UBERON:0001434,7.70e-08,22;UBERON:0002204,2.07e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0,0.68487187290202,0.478632953972018,0.856003649656029,0.0874204024189974,0.999329285446988,2.02475267389826,1.39912375625629,8.04428521663506,7.81552271552711,3.81950686618227,0.340173160604279,0.198581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,3.88406825470758,0.148442139064825,0,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0.359445373517761,0,0.508280908292259,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.431135985865684,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0.500535317148282,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.739012760666419,0.189491411770485,0,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,1.47529281905711,0.275936746304732,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,1.19609616558497,0,0.370389054739423,0.941842285023455,1.50363650493128,2.74533807847827,0.169978429993855,0.419854356970974,0.414599921413271,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.841368146639782,0.590758108698309,0.605798699688886,0.609654453239999,0.403304740547362,0.974578807397524,0.673482891482306,0.584384510907845,0.226730383615211,0.221985953374065,2.06341870201794,0.503653849092235,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p4@Ints4 | |||
}} |
Revision as of 19:44, 3 August 2015
Short description: | p4@Ints4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ints4_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -38bp_to_ENSMUST00000026126, NM_027256, uc009ijg.2, uc009ijh.2, uc009iji.2_5end |
EntrezGene: | 101861 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.93e-29 | 6 |
megakaryocyte | 9.93e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 3.43e-19 | 9 |
myeloid lineage restricted progenitor cell | 2.68e-13 | 13 |
myeloid cell | 8.39e-11 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 8.39e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.39e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.39e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 1.02e-09 | 25 |
common myeloid progenitor | 4.33e-09 | 19 |
lymphocyte of B lineage | 2.54e-08 | 1 |
B cell | 2.54e-08 | 1 |
pro-B cell | 2.54e-08 | 1 |
hematopoietic cell | 1.61e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.61e-07 | 32 |
hematopoietic stem cell | 1.61e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.61e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.39e-11 | 16 |
hemolymphoid system | 1.02e-10 | 48 |
immune system | 1.02e-10 | 48 |
spleen | 1.28e-10 | 6 |
cavity lining | 1.28e-10 | 6 |
serous membrane | 1.28e-10 | 6 |
gastrointestinal system mesentery | 1.28e-10 | 6 |
stomach region | 1.28e-10 | 6 |
mesentery | 1.28e-10 | 6 |
gastrointestinal system serosa | 1.28e-10 | 6 |
mesentery of stomach | 1.28e-10 | 6 |
gut mesentery | 1.28e-10 | 6 |
dorsal mesentery | 1.28e-10 | 6 |
dorsal mesogastrium | 1.28e-10 | 6 |
peritoneal cavity | 1.28e-10 | 6 |
spleen primordium | 1.28e-10 | 6 |
hematopoietic system | 5.08e-09 | 45 |
blood island | 5.08e-09 | 45 |
lymph node | 2.16e-08 | 1 |
axillary lymph node | 2.16e-08 | 1 |
peripheral lymph node | 2.16e-08 | 1 |
shoulder | 2.16e-08 | 1 |
bone element | 7.70e-08 | 22 |
skeletal element | 7.70e-08 | 22 |
skeletal system | 7.70e-08 | 22 |
musculoskeletal system | 2.07e-07 | 32 |