FFCP PHASE1:Mm9::chr7:29600161..29600176,+: Difference between revisions
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{{FFCP|EntrezGene=15388|HGNC=|UniProt=|association_with_transcript=36bp_to_ENSMUST00000172841_5end|description=CAGE_peak_5_at_Hnrnpl_5end|id=chr7:29600161..29600176,+|ontology_enrichment_celltype=CL:0000034!9.08e-18!97;CL:0000723!5.45e-17!91;CL:0000048!5.45e-17!91;CL:0000144!3.89e-14!121;CL:0000012!3.89e-14!121;CL:0002371!1.93e-13!118;CL:0000548!1.54e-12!115;CL:0000004!1.54e-12!115;CL:0000255!1.54e-12!115;CL:0000055!2.38e-10!50;CL:0000117!2.86e-10!23;CL:0000337!2.86e-10!23;CL:0002319!3.28e-09!43;CL:0000393!4.14e-09!39;CL:0000211!4.14e-09!39;CL:0000221!9.81e-09!44;CL:0000133!9.81e-09!44;CL:0000540!5.89e-08!33;CL:0000047!5.89e-08!33;CL:0000031!5.89e-08!33;CL:0000404!5.89e-08!33;CL:0000219!2.82e-07!54;CL:0002321!3.72e-07!70;CL:0000220!3.72e-07!70;CL:0002320!7.16e-07!46;CL:0000134!7.16e-07!46|ontology_enrichment_celltype_v019_2=CL:0000034,3.06e-19,97;CL:0000723,1.32e-18,91;CL:0000048,1.32e-18,91;CL:0000117,6.04e-13,23;CL:0000337,6.04e-13,23;CL:0002319,5.93e-12,43;CL:0000221,2.12e-11,44;CL:0000133,2.12e-11,44;CL:0000393,8.96e-11,39;CL:0000211,8.96e-11,39;CL:0000540,6.86e-10,33;CL:0000047,6.86e-10,33;CL:0000031,6.86e-10,33;CL:0000404,6.86e-10,33;CL:0002321,9.49e-09,70;CL:0000219,2.95e-08,54;CL:0002320,2.15e-07,46;CL:0000134,2.15e-07,46;CL:0000738,7.01e-07,17;CL:0002087,7.01e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.00e-09!34;UBERON:0002384!7.16e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.95e-11,34;UBERON:0001017,5.21e-09,73;UBERON:0001016,7.64e-09,75;UBERON:0003528,3.52e-08,29;UBERON:0002791,3.52e-08,29;UBERON:0001893,3.52e-08,29;UBERON:0000956,1.32e-07,21;UBERON:0001869,1.32e-07,21;UBERON:0000203,1.32e-07,21;UBERON:0002384,2.15e-07,46;UBERON:0000073,4.60e-07,54|phase1_expression=0.480446541314382,0,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,1.63528848416868,1.67860320474049,1.267098499365,0.936258105287974,1.36974374580404,1.19658238493005,1.54080656938085,1.92324885321794,0.999329285446988,1.41732687172878,1.39912375625629,0.788655413395594,0.959801035240171,0,0.340173160604279,2.6808556824239,2.87319768052829,3.03985603307473,1.60586496747019,0,0,0.646413698057667,3.23039813075836,0.252030129759931,0.443461021310609,8.25539875497521,4.30545351309199,0,0.866554859253824,0.997407872150954,1.22501613757421,1.25559489221072,1.5626706890476,2.09409497589519,0.588231488031014,0.683045484958446,0,0.629484089877886,0.811015449756117,1.10128051297009,4.69434806608824,3.48840250208714,0.439372365468944,1.74986909166855,1.67983705950435,0,1.8456086666351,1.45072428402269,3.36093799142464,5.14518872071894,4.01146815914259,2.57836046138721,2.63011399117477,5.28990979272033,5.70448263155561,2.03306719241479,2.66788438833342,4.04954872776629,10.8775299882367,5.6838409195688,5.99200221036809,6.53171119046643,3.31806759387129,10.1254453748768,2.52389953621658,2.85650984403804,2.20868540951614,1.95985278743926,3.1629005436018,1.83843757322004,1.10115880999389,1.27687338085188,1.99688493233117,2.90149833006426,2.56165402086747,2.6045668527838,1.67509799400829,0.56276261003168,1.37518422999129,2.65165726926301,4.9830088279686,2.60959224155421,0.605809546665472,1.13357340160178,0.579728977403356,0.860423876981386,0,3.2382191498269,0.649776417447669,0.896053774194671,0.421333260395256,1.87473354835864,1.81850203222008,0.35333957451034,0.422530259330042,1.28326477414318,0,0,1.29894624606728,2.28023878927589,0.505524445014783,0.5709193985953,0.258937883647172,0.593768556259299,0.867426633830679,0,1.15307748628029,1.05505848386836,0.705532242814229,0.376999773989026,1.48316980640624,0.86759614151947,0,0.323533699894818,0,0,0,0.585561594023094,0,0.510914110417183,3.23500836165985,0.599902730993408,1.14363204365758,0.149790639404823,0.457500602818626,0.628271760564322,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.712875546952214,0.497627882440372,0.505445516867349,0.420883711772948,0.390361328888111,1.37941262660084,0.540186389416048,1.20563854268572,0.340182495756639,0.512454881139399,0.468508622798644,0.258703370739016,1.94011193639558,1.32374256117473,1.40760899331159,1.09597866213787,0.556094498451196,0.696504333044333,0.61734640922383,1.39323986772945,0,0.51469581422943,1.70498099637356,1.03562886267751,1.17263029990548,0.900310307305074,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,1.3413670069981,0.934122738937356,0.658239399653922,0.492502392237286,0.243206428637567,1.02339991197733,0.439100230582101,0.671032093801859,0.210289948564127,1.02904612379284,0.330418782983798,0.264450566663544,1.2797295032114,0.696710015581316,0.902072229254653,0.605050573870028,0.667134131534611,0.760902504450237,1.42358718463353,0.329397909448022,2.01068167040216,0,0.19496408711912,0,0.432276099749388,0.398282546508734,1.70701110857774,0.685491075658373,0,0.407302655690628,0.581857461502877,0.771494018793504,0.379419222745544,0.738050739898011,0.470996183524124,0.370191491765402,0.5929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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15388 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENSMUST00000172841_5end | |||
|cluster_id=chr7:29600161..29600176,+ | |||
|description=CAGE_peak_5_at_Hnrnpl_5end | |||
|id=chr7:29600161..29600176,+ | |||
|ontology_enrichment_celltype=CL:0000034!9.08e-18!97;CL:0000723!5.45e-17!91;CL:0000048!5.45e-17!91;CL:0000144!3.89e-14!121;CL:0000012!3.89e-14!121;CL:0002371!1.93e-13!118;CL:0000548!1.54e-12!115;CL:0000004!1.54e-12!115;CL:0000255!1.54e-12!115;CL:0000055!2.38e-10!50;CL:0000117!2.86e-10!23;CL:0000337!2.86e-10!23;CL:0002319!3.28e-09!43;CL:0000393!4.14e-09!39;CL:0000211!4.14e-09!39;CL:0000221!9.81e-09!44;CL:0000133!9.81e-09!44;CL:0000540!5.89e-08!33;CL:0000047!5.89e-08!33;CL:0000031!5.89e-08!33;CL:0000404!5.89e-08!33;CL:0000219!2.82e-07!54;CL:0002321!3.72e-07!70;CL:0000220!3.72e-07!70;CL:0002320!7.16e-07!46;CL:0000134!7.16e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.06e-19,97;CL:0000723,1.32e-18,91;CL:0000048,1.32e-18,91;CL:0000117,6.04e-13,23;CL:0000337,6.04e-13,23;CL:0002319,5.93e-12,43;CL:0000221,2.12e-11,44;CL:0000133,2.12e-11,44;CL:0000393,8.96e-11,39;CL:0000211,8.96e-11,39;CL:0000540,6.86e-10,33;CL:0000047,6.86e-10,33;CL:0000031,6.86e-10,33;CL:0000404,6.86e-10,33;CL:0002321,9.49e-09,70;CL:0000219,2.95e-08,54;CL:0002320,2.15e-07,46;CL:0000134,2.15e-07,46;CL:0000738,7.01e-07,17;CL:0002087,7.01e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.00e-09!34;UBERON:0002384!7.16e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.95e-11,34;UBERON:0001017,5.21e-09,73;UBERON:0001016,7.64e-09,75;UBERON:0003528,3.52e-08,29;UBERON:0002791,3.52e-08,29;UBERON:0001893,3.52e-08,29;UBERON:0000956,1.32e-07,21;UBERON:0001869,1.32e-07,21;UBERON:0000203,1.32e-07,21;UBERON:0002384,2.15e-07,46;UBERON:0000073,4.60e-07,54 | |||
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| |||
|short_description=p5@Hnrnpl | |||
}} |
Revision as of 23:29, 4 August 2015
Short description: | p5@Hnrnpl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hnrnpl_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENSMUST00000172841_5end |
EntrezGene: | 15388 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.06e-19 | 97 |
somatic stem cell | 1.32e-18 | 91 |
multi fate stem cell | 1.32e-18 | 91 |
CNS neuron (sensu Vertebrata) | 6.04e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-13 | 23 |
neural cell | 5.93e-12 | 43 |
ectodermal cell | 2.12e-11 | 44 |
neurectodermal cell | 2.12e-11 | 44 |
electrically responsive cell | 8.96e-11 | 39 |
electrically active cell | 8.96e-11 | 39 |
neuron | 6.86e-10 | 33 |
neuronal stem cell | 6.86e-10 | 33 |
neuroblast | 6.86e-10 | 33 |
electrically signaling cell | 6.86e-10 | 33 |
embryonic cell | 9.49e-09 | 70 |
motile cell | 2.95e-08 | 54 |
connective tissue cell | 2.15e-07 | 46 |
mesenchymal cell | 2.15e-07 | 46 |
leukocyte | 7.01e-07 | 17 |
nongranular leukocyte | 7.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.95e-11 | 34 |
central nervous system | 5.21e-09 | 73 |
nervous system | 7.64e-09 | 75 |
brain grey matter | 3.52e-08 | 29 |
regional part of telencephalon | 3.52e-08 | 29 |
telencephalon | 3.52e-08 | 29 |
cerebral cortex | 1.32e-07 | 21 |
cerebral hemisphere | 1.32e-07 | 21 |
pallium | 1.32e-07 | 21 |
connective tissue | 2.15e-07 | 46 |
regional part of nervous system | 4.60e-07 | 54 |