FFCP PHASE1:Mm9::chr8:46889054..46889057,+: Difference between revisions
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{{FFCP|EntrezGene=234214|HGNC=|MCL_coexpression_id=373|UniProt=|association_with_transcript=492bp_to_ENSMUST00000136344_5end|description=CAGE_peak_18_at_Sorbs2_5end|id=chr8:46889054..46889057,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,6.80e-07,3;CL:0000737,6.80e-07,3;CL:0000746,6.80e-07,3;CL:0000513,6.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!7.71e-14!43;UBERON:0007100!2.00e-13!18;UBERON:0000948!2.00e-13!18;UBERON:0005498!2.00e-13!18;UBERON:0004140!2.00e-13!18;UBERON:0009881!2.00e-13!18;UBERON:0004141!2.00e-13!18;UBERON:0003084!2.00e-13!18;UBERON:0007005!2.00e-13!18;UBERON:0004139!2.00e-13!18;UBERON:0004291!2.00e-13!18;UBERON:0004111!6.27e-12!122;UBERON:0004535!1.82e-10!23;UBERON:0001009!1.82e-10!23;UBERON:0000025!2.20e-10!114;UBERON:0004872!5.09e-09!33;UBERON:0003914!1.60e-08!47;UBERON:0002020!9.90e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.62e-35,18;UBERON:0000948,3.62e-35,18;UBERON:0005498,3.62e-35,18;UBERON:0004140,3.62e-35,18;UBERON:0009881,3.62e-35,18;UBERON:0004141,3.62e-35,18;UBERON:0003084,3.62e-35,18;UBERON:0007005,3.62e-35,18;UBERON:0004139,3.62e-35,18;UBERON:0004291,3.62e-35,18;UBERON:0004535,1.94e-29,23;UBERON:0001009,1.94e-29,23;UBERON:0003103,5.22e-22,43;UBERON:0004872,3.21e-21,33;UBERON:0003914,5.08e-20,47;UBERON:0010314,1.75e-16,92;UBERON:0004111,1.47e-15,122;UBERON:0000025,4.84e-15,114;UBERON:0000483,1.59e-07,174;UBERON:0000119,2.43e-07,176|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,1.5378032791413,3.11087838518853,0.419959264876088,0,0.167782606057736,0,0,2.82985379639542,2.0057340795713,2.57836046138721,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,1.34796496001021,0.540023753326763,0,0,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0.638436690425939,0.921639199537461,0.131886287730194,0.548925861614458,1.04182674111352,0.558365998002762,0,0.61119299110724,0.883885756421003,1.28134512719193,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,2.69851595818909,1.94932925234301,0,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,1.94841936910093,0.760079596425296,0.505524445014783,0.11418387971906,0.258937883647172,2.67195850316685,0,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,1.25666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,0.149790639404823,1.83000241127451,0.502617408451458,1.39059456153821,1.02286182932132,0.62336413367868,0.973447578406546,0.203678727700633,0.373220911830279,1.0108910337347,0,0.260240885925407,0,0.360124259610698,1.05493372485001,0.612328492361951,0.896796041993948,0.281105173679186,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.48550927042602,3.04883877975425,3.78130329068131,4.97163944728941,4.9191057936851,5.86215028972037,8.13868806626427,1.3413670069981,5.7215017759913,3.94943639792353,6.895033491322,1.94565142910054,2.19299981137998,4.61055242111206,1.07365135008297,0.841159794256509,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0,0,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.350679099451593,0.505892296994058,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.823684239564244,5.75072826109418,0.744281895337007,0.312037673114561,0.757736633841335,1.07638448113147,0.482443521363367,0.184753190166605,0,0.325929952884052,0.678980343100753,0,0,0.476087281772027,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0.809621403349789,0.292255857911312,0.395287777946524,0,0.283880170416537,0.712262414669021,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0,0.608929898229199,2.3467170806371,0.21183207086382,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,0,0,0.330613822901344,0.523511883968059,0.777689839750757,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.39061315453185,0.209718688851422,0,0.576060012515731,0,0,0,0,0,0,0,0.14768952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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234214 | |||
|HGNC= | |||
|MCL_coexpression_id=373 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=492bp_to_ENSMUST00000136344_5end | |||
|cluster_id=chr8:46889054..46889057,+ | |||
|description=CAGE_peak_18_at_Sorbs2_5end | |||
|id=chr8:46889054..46889057,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.80e-07,3;CL:0000737,6.80e-07,3;CL:0000746,6.80e-07,3;CL:0000513,6.80e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!7.71e-14!43;UBERON:0007100!2.00e-13!18;UBERON:0000948!2.00e-13!18;UBERON:0005498!2.00e-13!18;UBERON:0004140!2.00e-13!18;UBERON:0009881!2.00e-13!18;UBERON:0004141!2.00e-13!18;UBERON:0003084!2.00e-13!18;UBERON:0007005!2.00e-13!18;UBERON:0004139!2.00e-13!18;UBERON:0004291!2.00e-13!18;UBERON:0004111!6.27e-12!122;UBERON:0004535!1.82e-10!23;UBERON:0001009!1.82e-10!23;UBERON:0000025!2.20e-10!114;UBERON:0004872!5.09e-09!33;UBERON:0003914!1.60e-08!47;UBERON:0002020!9.90e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.62e-35,18;UBERON:0000948,3.62e-35,18;UBERON:0005498,3.62e-35,18;UBERON:0004140,3.62e-35,18;UBERON:0009881,3.62e-35,18;UBERON:0004141,3.62e-35,18;UBERON:0003084,3.62e-35,18;UBERON:0007005,3.62e-35,18;UBERON:0004139,3.62e-35,18;UBERON:0004291,3.62e-35,18;UBERON:0004535,1.94e-29,23;UBERON:0001009,1.94e-29,23;UBERON:0003103,5.22e-22,43;UBERON:0004872,3.21e-21,33;UBERON:0003914,5.08e-20,47;UBERON:0010314,1.75e-16,92;UBERON:0004111,1.47e-15,122;UBERON:0000025,4.84e-15,114;UBERON:0000483,1.59e-07,174;UBERON:0000119,2.43e-07,176 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,1.5378032791413,3.11087838518853,0.419959264876088,0,0.167782606057736,0,0,2.82985379639542,2.0057340795713,2.57836046138721,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,1.34796496001021,0.540023753326763,0,0,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0.638436690425939,0.921639199537461,0.131886287730194,0.548925861614458,1.04182674111352,0.558365998002762,0,0.61119299110724,0.883885756421003,1.28134512719193,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,2.69851595818909,1.94932925234301,0,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,1.94841936910093,0.760079596425296,0.505524445014783,0.11418387971906,0.258937883647172,2.67195850316685,0,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,1.25666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,0.149790639404823,1.83000241127451,0.502617408451458,1.39059456153821,1.02286182932132,0.62336413367868,0.973447578406546,0.203678727700633,0.373220911830279,1.0108910337347,0,0.260240885925407,0,0.360124259610698,1.05493372485001,0.612328492361951,0.896796041993948,0.281105173679186,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.48550927042602,3.04883877975425,3.78130329068131,4.97163944728941,4.9191057936851,5.86215028972037,8.13868806626427,1.3413670069981,5.7215017759913,3.94943639792353,6.895033491322,1.94565142910054,2.19299981137998,4.61055242111206,1.07365135008297,0.841159794256509,0.308713837137853,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0,0,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.350679099451593,0.505892296994058,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.823684239564244,5.75072826109418,0.744281895337007,0.312037673114561,0.757736633841335,1.07638448113147,0.482443521363367,0.184753190166605,0,0.325929952884052,0.678980343100753,0,0,0.476087281772027,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0.809621403349789,0.292255857911312,0.395287777946524,0,0.283880170416537,0.712262414669021,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0,0.608929898229199,2.3467170806371,0.21183207086382,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,0,0,0.330613822901344,0.523511883968059,0.777689839750757,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.39061315453185,0.209718688851422,0,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,1.54551675225752,0.750729901804728,0,0.428736758158132,1.00314420807073,3.95326289831947,1.84130094602871,0,0.68741272937475,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0.682934423016537,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.578719832943424,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0 | |||
|short_description=p18@Sorbs2 | |||
}} |
Revision as of 20:29, 3 August 2015
Short description: | p18@Sorbs2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Sorbs2_5end |
Coexpression cluster: | MCL_coexpression_mm9:373 |
Association with transcript: | 492bp_to_ENSMUST00000136344_5end |
EntrezGene: | 234214 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.80e-07 | 3 |
striated muscle cell | 6.80e-07 | 3 |
cardiac muscle cell | 6.80e-07 | 3 |
cardiac muscle myoblast | 6.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.62e-35 | 18 |
heart | 3.62e-35 | 18 |
primitive heart tube | 3.62e-35 | 18 |
primary heart field | 3.62e-35 | 18 |
anterior lateral plate mesoderm | 3.62e-35 | 18 |
heart tube | 3.62e-35 | 18 |
heart primordium | 3.62e-35 | 18 |
cardiac mesoderm | 3.62e-35 | 18 |
cardiogenic plate | 3.62e-35 | 18 |
heart rudiment | 3.62e-35 | 18 |
cardiovascular system | 1.94e-29 | 23 |
circulatory system | 1.94e-29 | 23 |
compound organ | 5.22e-22 | 43 |
splanchnic layer of lateral plate mesoderm | 3.21e-21 | 33 |
epithelial tube | 5.08e-20 | 47 |
structure with developmental contribution from neural crest | 1.75e-16 | 92 |
anatomical conduit | 1.47e-15 | 122 |
tube | 4.84e-15 | 114 |
epithelium | 1.59e-07 | 174 |
cell layer | 2.43e-07 | 176 |