FFCP PHASE1:Hg19::chr10:5541525..5541539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=51806 | |EntrezGene=entrezgene:51806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18180 | |HGNC=HGNC:18180 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9NZT1,Q53H37 | |UniProt=uniprot:Q9NZT1,uniprot:Q53H37 | ||
|association_with_transcript=0bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | |association_with_transcript=0bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | ||
|cluster_id=chr10:5541525..5541539,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_1_at_CALML5_5end | |description=CAGE_peak_1_at_CALML5_5end | ||
Revision as of 14:13, 23 July 2015
| Short description: | p1@CALML5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CALML5_5end |
| Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
| Association with transcript: | 0bp_to_ENST00000380332, NM_017422, uc001iic.2_5end |
| EntrezGene: | 51806 |
| HGNC: | 18180 |
| UniProt: | Q9NZT1Q53H37 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CALML5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| acinar cell | 7.47e-13 | 5 |
| bronchial epithelial cell | 5.12e-12 | 3 |
| protein secreting cell | 1.01e-10 | 6 |
| general ecto-epithelial cell | 1.28e-09 | 14 |
| corneal epithelial cell | 2.84e-09 | 2 |
| CD1a-positive Langerhans cell | 6.85e-09 | 2 |
| immature CD1a-positive Langerhans cell | 6.85e-09 | 2 |
| sebum secreting cell | 9.04e-09 | 2 |
| epithelial cell of sweat gland | 9.04e-09 | 2 |
| epithelial cell of skin gland | 9.04e-09 | 2 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| gland of gut | 2.73e-19 | 10 |
| saliva-secreting gland | 1.96e-17 | 6 |
| gland of oral region | 1.96e-17 | 6 |
| gland of foregut | 1.96e-17 | 6 |
| oral gland | 1.96e-17 | 6 |
| oral cavity | 1.96e-17 | 6 |
| oral opening | 1.56e-16 | 22 |
| respiratory system | 5.30e-13 | 74 |
| anterior region of body | 9.11e-13 | 62 |
| craniocervical region | 9.11e-13 | 62 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| thoracic cancer | 1.37e-16 | 4 |
| breast cancer | 1.37e-16 | 4 |
Showing 1 to 2 of 2 entries
