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FFCP PHASE1:Hg19::chr13:113963951..113964005,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=3916
|EntrezGene=entrezgene:3916
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=6499
|HGNC=HGNC:6499
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=P11279
|UniProt=uniprot:P11279
|association_with_transcript=-94bp_to_BC006345_5end
|association_with_transcript=-94bp_to_BC006345_5end
|cluster_id=chr13:113963951..113964005,+
|description=CAGE_peak_4_at_LAMP1_5end
|description=CAGE_peak_4_at_LAMP1_5end
|id=chr13:113963951..113964005,+
|id=chr13:113963951..113964005,+

Revision as of 14:46, 24 July 2015

Short description:p4@LAMP1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_LAMP1_5end
Coexpression cluster:NA
Association with transcript: -94bp_to_BC006345_5end
EntrezGene:3916
HGNC: 6499
UniProt: P11279
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data