FFCP PHASE1:Hg19::chr2:46524474..46524491,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2034 | |EntrezGene=entrezgene:2034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3374 | |HGNC=HGNC:3374 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q99814,B3KW07 | |UniProt=uniprot:Q99814,uniprot:B3KW07 | ||
|association_with_transcript=-49bp_to_ENST00000263734,NM_001430_5end | |association_with_transcript=-49bp_to_ENST00000263734,NM_001430_5end | ||
|cluster_id=chr2:46524474..46524491,+ | |||
|description=CAGE_peak_4_at_EPAS1_5end | |description=CAGE_peak_4_at_EPAS1_5end | ||
|id=chr2:46524474..46524491,+ | |id=chr2:46524474..46524491,+ | ||
Revision as of 10:28, 29 July 2015
| Short description: | p4@EPAS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_EPAS1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -49bp_to_ENST00000263734, NM_001430_5end |
| EntrezGene: | 2034 |
| HGNC: | 3374 |
| UniProt: | Q99814B3KW07 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@EPAS1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 7.01e-08 | 121 |
| muscle cell | 3.04e-07 | 55 |
| muscle precursor cell | 7.52e-07 | 58 |
| myoblast | 7.52e-07 | 58 |
| multi-potent skeletal muscle stem cell | 7.52e-07 | 58 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk | 1.80e-10 | 199 |
| mesenchyme | 1.40e-09 | 160 |
| entire embryonic mesenchyme | 1.40e-09 | 160 |
| trunk mesenchyme | 2.21e-08 | 122 |
| mesoderm | 7.01e-07 | 315 |
| mesoderm-derived structure | 7.01e-07 | 315 |
| presumptive mesoderm | 7.01e-07 | 315 |
Showing 1 to 7 of 7 entries
