FFCP PHASE1:Hg19::chr2:242067139..242067166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=23178 | |EntrezGene=entrezgene:23178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17270 | |HGNC=HGNC:17270 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000459710_5end | |association_with_transcript=7bp_to_ENST00000459710_5end | ||
|cluster_id=chr2:242067139..242067166,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_8_at_PASK_5end | |description=CAGE_peak_8_at_PASK_5end | ||
Revision as of 08:36, 29 July 2015
| Short description: | p8@PASK |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_PASK_5end |
| Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
| Association with transcript: | 7bp_to_ENST00000459710_5end |
| EntrezGene: | 23178 |
| HGNC: | 17270 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@PASK |
|---|
0
5
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20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 8.77e-78 | 24 |
| pro-B cell | 8.77e-78 | 24 |
| lymphocyte | 6.23e-47 | 53 |
| common lymphoid progenitor | 6.23e-47 | 53 |
| B cell | 7.25e-46 | 14 |
| lymphoid lineage restricted progenitor cell | 3.56e-43 | 52 |
| nongranular leukocyte | 2.59e-19 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.09e-16 | 120 |
| leukocyte | 9.59e-16 | 136 |
| hematopoietic cell | 1.22e-15 | 177 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| vermiform appendix | 8.12e-08 | 1 |
| caecum | 8.12e-08 | 1 |
| midgut | 8.12e-08 | 1 |
| tonsil | 1.21e-07 | 1 |
| mucosa-associated lymphoid tissue | 1.21e-07 | 1 |
| lymphoid tissue | 1.21e-07 | 1 |
| tonsillar ring | 1.21e-07 | 1 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 4.05e-11 | 10 |
| genetic disease | 2.52e-08 | 1 |
| monogenic disease | 2.52e-08 | 1 |
| xeroderma pigmentosum | 2.52e-08 | 1 |
| non-Hodgkin lymphoma | 4.40e-08 | 1 |
| cutaneous T cell lymphoma | 4.40e-08 | 1 |
| mycosis fungoides | 4.40e-08 | 1 |
| acute leukemia | 1.06e-07 | 1 |
Showing 1 to 8 of 8 entries
