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|located_in=
|located_in=
|name=reproductive system
|name=reproductive system
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 17:13, 12 September 2014

Name:reproductive system
Namespace:FANTOM
Definition:"Anatomical system that has as its parts the organs concerned with reproduction." [Wikipedia:Reproductive_system]
Xrefs:
links:

AAO:0010258
BILA:0000103
BTO:0000081
EFO:0000809
EHDAA2:0001603
EHDAA:5923
EMAPA:17381
EV:0100100
FBbt:00004826
FBbt:00004857
FMA:7160
GAID:363
HAO:0000374
HAO:0000895
[1]
[ 200px-Penis.svg.png 200px-Penis.svg.png]
MA:0000326
MIAA:0000305
ncithesaurus:Reproductive_System
OpenCyc:Mx4rvVja4ZwpEbGdrcN5Y29ycA
SCTID:278875001
TAO:0000632
VHOG:0000182
WBbt:0005747
XAO:0000142

ZFA:0000632
Synonyms: "animal reproductive system" RELATED [BTO:0000081]
"genital system" RELATED []
"genitalia" RELATED PLURAL []
"Geschlechtsorgan" RELATED [BTO:0000081]
"organa genitalia" RELATED [BTO:0000081]
"reproductive tissue" RELATED [BTO:0000081]
"systemata genitalia" RELATED LATIN [Wikipedia:Reproductive_system]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FBbt_00004857-FMA_7160-MA_0000326-MIAA_0000305-WBbt_0005747-XAO_0000142-ZFA_0000632
Subset: functional_classification
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system),UBERON:0004120(mesoderm-derived structure)
disjoint_from:UBERON:0001004(respiratory system),UBERON:0001007(digestive system),UBERON:0001008(renal system),UBERON:0001009(circulatory system),UBERON:0001016(nervous system),UBERON:0001033(gustatory system),UBERON:0001434(skeletal system),UBERON:0002204(musculoskeletal system),UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
develops_from:UBERON:0000926(mesoderm)



Children

is a:UBERON:0000079 (male reproductive system),UBERON:0000474 (female reproductive system)
disjoint from:UBERON:0000949 (endocrine system)
part of:UBERON:0000991 (gonad),UBERON:0003133 (reproductive organ),UBERON:0003937 (sex gland),UBERON:0005156 (reproductive structure),UBERON:0005564 (gonad primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000990 (reproductive system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-57FFCP PHASE2:Mm9::chr5:31271028..31271040,+#_1f07befdea0379c98dc83598e52bca0ap1@Tcf23
1.07e-57FFCP PHASE1:Mm9::chr5:31271028..31271040,+#_1f07befdea0379c98dc83598e52bca0ap1@Tcf23
2.67e-50FFCP PHASE1:Mm9::chr4:143998300..143998343,-#_c593d12baf8998b34f431ad5cc690a13p1@Pramef12
2.67e-50FFCP PHASE2:Mm9::chr4:143998300..143998343,-#_c593d12baf8998b34f431ad5cc690a13p1@Pramef12
3.52e-46FFCP PHASE2:Mm9::chr6:18059063..18059084,-#_b386b545415350d625271223619f6687p2@Asz1
3.52e-46FFCP PHASE1:Mm9::chr6:18059063..18059084,-#_b386b545415350d625271223619f6687p2@Asz1
1.54e-44FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_db60389287bf842a3940c5d7b4aade12p1@Mael
1.54e-44FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_db60389287bf842a3940c5d7b4aade12p1@Mael
1.04e-43FFCP PHASE2:Mm9::chr7:52741629..52741644,+#_941053d6b516c3f1285064b3311a3530p7@Tulp2
1.04e-43FFCP PHASE1:Mm9::chr7:52741629..52741644,+#_941053d6b516c3f1285064b3311a3530p7@Tulp2
1.59e-43FFCP PHASE1:Mm9::chr14:70829178..70829221,-#_96cf87ac8b0a2d36fa3d2828b5b26463p1@Piwil2
1.59e-43FFCP PHASE2:Mm9::chr14:70829178..70829221,-#_96cf87ac8b0a2d36fa3d2828b5b26463p1@Piwil2
6.16e-43FFCP PHASE2:Mm9::chr3:40512838..40512859,+#_41a1140d4d1636c525b8d9f999d9101cp2@Slc25a31
6.16e-43FFCP PHASE1:Mm9::chr3:54985946..54985981,+#_41a1140d4d1636c525b8d9f999d9101cp1@Sohlh2
6.16e-43FFCP PHASE2:Mm9::chr3:54985946..54985981,+#_41a1140d4d1636c525b8d9f999d9101cp1@Sohlh2
6.16e-43FFCP PHASE1:Mm9::chr3:40512838..40512859,+#_41a1140d4d1636c525b8d9f999d9101cp2@Slc25a31
6.47e-43FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_9415685488e6554784d06926a6acd13ap1@Cst12
6.47e-43FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_9415685488e6554784d06926a6acd13ap1@Cst12
6.69e-43FFCP PHASE2:Mm9::chr12:31775417..31775434,-#_71f2164e8d3a3229e0196db965177e51p@chr12:31775417..31775434, -
6.69e-43FFCP PHASE1:Mm9::chr12:31775417..31775434,-#_71f2164e8d3a3229e0196db965177e51p@chr12:31775417..31775434, -
7.14e-43FFCP PHASE1:Mm9::chr6:18059038..18059062,-#_421aff42b8be4c62cc814531e3760171p1@Asz1
7.14e-43FFCP PHASE2:Mm9::chr6:18059038..18059062,-#_421aff42b8be4c62cc814531e3760171p1@Asz1
3.8e-42FFCP PHASE1:Mm9::chr7:109015811..109015852,-#_b92f67d95f8858b09af7e11e3c70b215p6@Folr1
3.8e-42FFCP PHASE2:Mm9::chr7:109015811..109015852,-#_b92f67d95f8858b09af7e11e3c70b215p6@Folr1
2.08e-41FFCP PHASE1:Mm9::chr17:50432917..50432931,-#_f892c3012fc3c2b5d3cf0122aa69b787p1@Dazl
2.08e-41FFCP PHASE2:Mm9::chr17:50432917..50432931,-#_f892c3012fc3c2b5d3cf0122aa69b787p1@Dazl
2.8e-41FFCP PHASE2:Mm9::chr7:104599826..104599841,+#_262c23f6e08ab23f41f189aae0787954p2@Kctd14
2.8e-41FFCP PHASE1:Mm9::chr7:104599826..104599841,+#_262c23f6e08ab23f41f189aae0787954p2@Kctd14
3.43e-41FFCP PHASE1:Mm9::chr3:107746281..107746297,-#_7fa0ba09303f0c582cc845b5c0d12aa5p5@Gstm6
3.43e-41FFCP PHASE2:Mm9::chr3:107746281..107746297,-#_7fa0ba09303f0c582cc845b5c0d12aa5p5@Gstm6
5.46e-41FFCP PHASE2:Mm9::chr15:88813324..88813392,+#_37a828884baee01d6e037f04b941dff8p1@Mov10l1
5.46e-41FFCP PHASE1:Mm9::chr15:88813324..88813392,+#_37a828884baee01d6e037f04b941dff8p1@Mov10l1
1.3e-40FFCP PHASE1:Mm9::chr3:102740016..102740030,-#_5bfda84208ed8bcca2d4ed4c03253130p1@Sycp1
1.3e-40FFCP PHASE2:Mm9::chr3:102740016..102740030,-#_5bfda84208ed8bcca2d4ed4c03253130p1@Sycp1
2.45e-40FFCP PHASE1:Mm9::chr6:49345558..49345593,+#_b8b79476f89cafee5d8cd148f466b4e4p2@Stk31
2.45e-40FFCP PHASE2:Mm9::chr6:49345558..49345593,+#_b8b79476f89cafee5d8cd148f466b4e4p2@Stk31
2.68e-40FFCP PHASE2:Mm9::chrX:98989738..98989756,-#_49c4cd4c03f83befb1be5fbb1c18b206p@chrX:98989738..98989756, -
2.68e-40FFCP PHASE1:Mm9::chrX:98989738..98989756,-#_49c4cd4c03f83befb1be5fbb1c18b206p@chrX:98989738..98989756, -
3.95e-40FFCP PHASE2:Mm9::chr7:52741649..52741686,+#_e2b037bf8634ad4673f1489b080bca58p3@Tulp2
3.95e-40FFCP PHASE1:Mm9::chr7:52741649..52741686,+#_e2b037bf8634ad4673f1489b080bca58p3@Tulp2
6.39e-40FFCP PHASE1:Mm9::chrX:135868376..135868409,+#_d85279b4901309eff9b85e6628dc2436p1@Trap1a
6.39e-40FFCP PHASE2:Mm9::chrX:135868376..135868409,+#_d85279b4901309eff9b85e6628dc2436p1@Trap1a
6.53e-40FFCP PHASE1:Mm9::chrX:35232004..35232025,-#_b3853a5350e5561fa31b2e5fc0030adep@chrX:35232004..35232025, -
6.53e-40FFCP PHASE2:Mm9::chrX:35232004..35232025,-#_b3853a5350e5561fa31b2e5fc0030adep@chrX:35232004..35232025, -
6.63e-40FFCP PHASE1:Mm9::chr17:28644343..28644394,-#_d6743ba4a011f15c2218f1d95d777230p3@Fkbp5
6.63e-40FFCP PHASE2:Mm9::chr17:28644343..28644394,-#_d6743ba4a011f15c2218f1d95d777230p3@Fkbp5
6.93e-40FFCP PHASE2:Mm9::chr15:102275818..102275834,+#_b0383fc6cafc8784ea32c78d9e42b3f0p1@Amhr2
6.93e-40FFCP PHASE1:Mm9::chr15:102275818..102275834,+#_b0383fc6cafc8784ea32c78d9e42b3f0p1@Amhr2
7.7e-40FFCP PHASE2:Mm9::chr15:102277099..102277126,+#_6519d0937be0899e1735509a8c74211ap@chr15:102277099..102277126, +
7.7e-40FFCP PHASE1:Mm9::chr15:102277099..102277126,+#_6519d0937be0899e1735509a8c74211ap@chr15:102277099..102277126, +
1.04e-39FFCP PHASE1:Mm9::chr11:100939677..100939722,+#_00ffcbab2ae98ec0499480f979e9c845p1@Hsd17b1
1.04e-39FFCP PHASE2:Mm9::chr11:100939677..100939722,+#_00ffcbab2ae98ec0499480f979e9c845p1@Hsd17b1
1.17e-39FFCP PHASE2:Mm9::chr4:62295167..62295182,+#_0ceebef527c1c25e113cb1f7a7e58ef2p22@Rgs3
1.17e-39FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_0ceebef527c1c25e113cb1f7a7e58ef2p3@Cst9
1.17e-39FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_0ceebef527c1c25e113cb1f7a7e58ef2p3@Cst9
1.17e-39FFCP PHASE1:Mm9::chr5:31270977..31270988,+#_0ceebef527c1c25e113cb1f7a7e58ef2p3@Tcf23
1.17e-39FFCP PHASE1:Mm9::chr4:62295167..62295182,+#_0ceebef527c1c25e113cb1f7a7e58ef2p22@Rgs3
1.17e-39FFCP PHASE2:Mm9::chr5:31270977..31270988,+#_0ceebef527c1c25e113cb1f7a7e58ef2p3@Tcf23
3.94e-39FFCP PHASE2:Mm9::chr5:135825867..135825910,-#_0d2058c1a140a4d8a1748fb59c3658c8p1@Fkbp6
3.94e-39FFCP PHASE2:Mm9::chr7:149469129..149469146,+#_0d2058c1a140a4d8a1748fb59c3658c8p@chr7:149469129..149469146, +
3.94e-39FFCP PHASE1:Mm9::chr7:149469129..149469146,+#_0d2058c1a140a4d8a1748fb59c3658c8p@chr7:149469129..149469146, +
3.94e-39FFCP PHASE1:Mm9::chr5:135825867..135825910,-#_0d2058c1a140a4d8a1748fb59c3658c8p1@Fkbp6
4.47e-39FFCP PHASE1:Mm9::chr7:147143936..147143939,-#_2dbabf6396d0d823db9a9c6ac81a0fc0p1@Mir202
4.47e-39FFCP PHASE2:Mm9::chr7:147143936..147143939,-#_2dbabf6396d0d823db9a9c6ac81a0fc0p1@Mir202
7.41e-39FFCP PHASE1:Mm9::chr11:87218551..87218615,+#_8d672969072aa42abe675dffae706c31p1@Tex14
7.41e-39FFCP PHASE2:Mm9::chr11:87218551..87218615,+#_8d672969072aa42abe675dffae706c31p1@Tex14
1.02e-38FFCP PHASE2:Mm9::chr17:32171438..32171468,-#_02f3c8ef503960fed5eb2ebc0aea397ep1@Hsf2bp
1.02e-38FFCP PHASE1:Mm9::chr17:32171438..32171468,-#_02f3c8ef503960fed5eb2ebc0aea397ep1@Hsf2bp
1.58e-38FFCP PHASE2:Mm9::chr3:95363593..95363613,+#_15b9c22e55dbd743cd3ab0cca0631859p1@Hormad1
1.58e-38FFCP PHASE1:Mm9::chr3:95363593..95363613,+#_15b9c22e55dbd743cd3ab0cca0631859p1@Hormad1
1.68e-38FFCP PHASE2:Mm9::chr13:24026303..24026308,+#_c5d8a54f9245319a227f8e8f1b2be070p1@Hist1h2aa
1.68e-38FFCP PHASE1:Mm9::chr13:24026303..24026308,+#_c5d8a54f9245319a227f8e8f1b2be070p1@Hist1h2aa
4.6e-38FFCP PHASE1:Mm9::chr2:104966510..104966538,-#_66a8af172dcc5ce684341bc5b4cc9dc3p2@ENSMUST00000174870
4.6e-38FFCP PHASE2:Mm9::chr2:104966510..104966538,-#_66a8af172dcc5ce684341bc5b4cc9dc3p2@ENSMUST00000174870
6.95e-38FFCP PHASE2:Mm9::chr9:50369387..50369406,-#_e45c8bc7bfd4b4b60b4a828761b88b98p1@Tex12
6.95e-38FFCP PHASE1:Mm9::chr9:50369387..50369406,-#_e45c8bc7bfd4b4b60b4a828761b88b98p1@Tex12
9.65e-38FFCP PHASE1:Mm9::chr18:47081451..47081490,+#_27d33738d8fe6cb1cd2804446e5e3350p1@Gm949
9.65e-38FFCP PHASE2:Mm9::chr18:47081451..47081490,+#_27d33738d8fe6cb1cd2804446e5e3350p1@Gm949
1.34e-37FFCP PHASE1:Mm9::chr19:40968642..40968653,+#_858733e7f5da03254a432e7456ad06fbp@chr19:40968642..40968653, +
1.34e-37FFCP PHASE2:Mm9::chr19:40968642..40968653,+#_858733e7f5da03254a432e7456ad06fbp@chr19:40968642..40968653, +
2.5e-37FFCP PHASE1:Mm9::chr3:107746250..107746266,-#_5a8b44d18aab38a54ab06b473137edb4p4@Gstm6
2.5e-37FFCP PHASE2:Mm9::chr3:107746250..107746266,-#_5a8b44d18aab38a54ab06b473137edb4p4@Gstm6
2.57e-37FFCP PHASE1:Mm9::chr1:36739960..36739999,-#_90cd6b648f6147419cab1ded8fc4ecbbp1@Fam178b
2.57e-37FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_90cd6b648f6147419cab1ded8fc4ecbbp1@Tuba3a, p2@Tuba3b
2.57e-37FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_90cd6b648f6147419cab1ded8fc4ecbbp1@Tuba3b
2.57e-37FFCP PHASE2:Mm9::chr6:145564529..145564546,+#_90cd6b648f6147419cab1ded8fc4ecbbp1@Tuba3b
2.57e-37FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_90cd6b648f6147419cab1ded8fc4ecbbp1@Tuba3a, p2@Tuba3b
2.57e-37FFCP PHASE2:Mm9::chr1:36739960..36739999,-#_90cd6b648f6147419cab1ded8fc4ecbbp1@Fam178b
3.24e-37FFCP PHASE2:Mm9::chr7:20074394..20074416,+#_47ab54b2ddc5c9a778a6eabc3932babbp1@Exoc3l2
3.24e-37FFCP PHASE1:Mm9::chr7:20074394..20074416,+#_47ab54b2ddc5c9a778a6eabc3932babbp1@Exoc3l2
6.46e-37FFCP PHASE2:Mm9::chr7:36322696..36322738,-#_fa723a3e1b75e29d35c6b0a76c611c6cp1@Tdrd12
6.46e-37FFCP PHASE1:Mm9::chr7:36322696..36322738,-#_fa723a3e1b75e29d35c6b0a76c611c6cp1@Tdrd12
6.93e-37FFCP PHASE1:Mm9::chrX:103416484..103416508,-#_8075417bb9aa1f545102ebe818047230p4@Taf9b
6.93e-37FFCP PHASE2:Mm9::chrX:103416484..103416508,-#_8075417bb9aa1f545102ebe818047230p4@Taf9b
1.25e-36FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_dcbdfada163dd1e8111705634ab55f5bp3@Hsd17b3
1.25e-36FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_dcbdfada163dd1e8111705634ab55f5bp2@Exoc3l2
1.25e-36FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_dcbdfada163dd1e8111705634ab55f5bp2@Exoc3l2
1.25e-36FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_dcbdfada163dd1e8111705634ab55f5bp3@Hsd17b3
1.34e-36FFCP PHASE2:Mm9::chrX:50788166..50788192,+#_a0b7a452e7b76bda7c68b99e934c9475p1@Etd
1.34e-36FFCP PHASE1:Mm9::chrX:50788166..50788192,+#_a0b7a452e7b76bda7c68b99e934c9475p1@Etd










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system which consists of organs and tissues associated with sexual reproduction of the organism.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000990&oldid=3277160"