UBERON:0001465: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=knee | |name=knee | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000978 | |part_of=UBERON:0000978 | ||
Latest revision as of 17:18, 12 September 2014
| Name: | knee | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A segment of the hindlimb that corresponds to the joint connecting a hindlimb stylopod and zeugopod." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: | "knee region" EXACT [] | ||
| Alt_id: | UBERON:FMA_24974-MA_0000046 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0008784(lower limb segment) |
|---|---|
| part_of: | UBERON:0000978(leg) |
Children
| part of: | UBERON:0001485 (knee joint),UBERON:0003321 (mesenchyme of knee),UBERON:0003577 (knee connective tissue) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10267-104D6
- 10295-104G7 (cruciate ligament, donor2)
- 10323-105A8
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001465 (knee), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
