UBERON:0002213: Difference between revisions
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|located_in= | |located_in= | ||
|name=cartilaginous joint | |name=cartilaginous joint | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:28, 12 September 2014
| Name: | cartilaginous joint | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA]" [FMA:FMA, Wikipedia:Cartilaginous_joint] | ||
| Xrefs: |
| ||
| Synonyms: |
"articulatio cartilaginea" EXACT [] "junctura cartilaginea" RELATED LATIN [Wikipedia:Cartilaginous_joint] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_7496-MA_0000320 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0011134(nonsynovial joint) |
|---|
Children
| is a: | UBERON:0002216 (symphysis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002213 (cartilaginous joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.25e-162 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_b704d0b3d63e6c8897c2b0cd9d85ec03 | p@chr3:174737010..174737023, + |
| 1.25e-162 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_b704d0b3d63e6c8897c2b0cd9d85ec03 | p@chr3:174737010..174737023, + |
| 3.92e-140 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_6222a5370420751300f61cdc2eaef3f3 | p4@PAX1 |
| 3.92e-140 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_6222a5370420751300f61cdc2eaef3f3 | p4@PAX1 |
| 4.22e-99 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_cbcac99dab9b90433d9f562674fe8d6f | p@chr5:30104176..30104187, - |
| 4.22e-99 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_cbcac99dab9b90433d9f562674fe8d6f | p@chr5:30104176..30104187, - |
| 1.06e-78 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_79afdd82f4383b24f72f2b6a3a7691d7 | p4@NKX3-2 |
| 1.06e-78 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_79afdd82f4383b24f72f2b6a3a7691d7 | p4@NKX3-2 |
| 2.52e-71 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_e850a82c1db3bf5867750df34365ac86 | p@chr9:114135497..114135526, - |
| 2.52e-71 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_e850a82c1db3bf5867750df34365ac86 | p@chr9:114135497..114135526, - |
| 7.4e-71 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_3e498a537466458a8f2cb4dcff473fd6 | p@chr2:241897125..241897142, - |
| 7.4e-71 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_3e498a537466458a8f2cb4dcff473fd6 | p@chr2:241897125..241897142, - |
| 6.33e-70 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_4a62d7046aae9c905f14d5b3148afa95 | p@chr3:80727046..80727051, - |
| 6.33e-70 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_4a62d7046aae9c905f14d5b3148afa95 | p@chr3:80727046..80727051, - |
| 4.8e-67 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_dd04d3cba19b62a59e47db6f5daf5257 | p15@SNED1 |
| 4.8e-67 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_dd04d3cba19b62a59e47db6f5daf5257 | p15@SNED1 |
| 1.24e-66 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_7c8608b767417b5490bd8cae7788305b | p20@CAPZB |
| 1.24e-66 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_7c8608b767417b5490bd8cae7788305b | p20@CAPZB |
| 1.26e-62 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_06e55f9c7a7a1ecdf981d8eacda8a6e5 | p@chr1:19778678..19778689, - |
| 1.26e-62 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_06e55f9c7a7a1ecdf981d8eacda8a6e5 | p@chr1:19778678..19778689, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_271ba27101196c8e81fa485dca69fc95 | p@chr2:241897189..241897221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_271ba27101196c8e81fa485dca69fc95 | p@chr2:241897189..241897221, - |
| 1.55e-57 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_5f73f14f4b5b13d585f173a9e7187b8c | p1@uc010aki.1 |
| 1.55e-57 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_5f73f14f4b5b13d585f173a9e7187b8c | p1@uc010aki.1 |
| 4.09e-56 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_a8c14f621ec3aec83716ebe513cf040a | p6@SIX4 |
| 4.09e-56 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_a8c14f621ec3aec83716ebe513cf040a | p6@SIX4 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_18edbcd6eb5672e7f461d57482ba1f35 | p3@uc010aki.1 |
| 3.74e-53 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_18edbcd6eb5672e7f461d57482ba1f35 | p3@uc010aki.1 |
| 1.15e-51 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_ce37c316706413bc30f9f93fa23ead9a | p3@PAX1 |
| 1.15e-51 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_ce37c316706413bc30f9f93fa23ead9a | p3@PAX1 |
| 2.3e-51 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_5ff3f3a1d6c62973b555ebec7588384b | p@chr10:81923378..81923389, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_5ff3f3a1d6c62973b555ebec7588384b | p@chr10:81923378..81923389, - |
| 3.24e-51 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_cc5e7e366a9e0ad41b022b98e51f5dc4 | p@chr2:12248310..12248334, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_cc5e7e366a9e0ad41b022b98e51f5dc4 | p@chr2:12248310..12248334, - |
| 8.0e-51 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_8e7221664346c81f8b0f938463f5dfea | p19@HDAC9 |
| 8.0e-51 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_8e7221664346c81f8b0f938463f5dfea | p19@HDAC9 |
| 5.06e-49 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_e51819817a198ea7a3314f63ba8141c7 | p@chr7:158224707..158224729, - |
| 5.06e-49 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_e51819817a198ea7a3314f63ba8141c7 | p@chr7:158224707..158224729, - |
| 5.24e-48 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_0e9ed012f93f9e984d2a68dce53c9346 | p@chr1:65888177..65888194, + |
| 5.24e-48 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_0e9ed012f93f9e984d2a68dce53c9346 | p@chr1:65888177..65888194, + |
| 2.98e-45 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_130222f2c0da81cf8682b6d73289f0b1 | p3@NKX3-2 |
| 2.98e-45 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_130222f2c0da81cf8682b6d73289f0b1 | p3@NKX3-2 |
| 2.92e-44 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_d63fbd51890becd85955338938c58668 | p1@MGC27382 |
| 2.92e-44 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_d63fbd51890becd85955338938c58668 | p1@MGC27382 |
| 1.71e-43 | FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_aab4a693b6feb8c16d293aeadfef5076 | p18@HDAC9 |
| 1.71e-43 | FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_aab4a693b6feb8c16d293aeadfef5076 | p18@HDAC9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_1dcdeb96b99c13343f148d15d73c0060 | p@chr13:24914614..24914622, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_1dcdeb96b99c13343f148d15d73c0060 | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_1dcdeb96b99c13343f148d15d73c0060 | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_1dcdeb96b99c13343f148d15d73c0060 | p@chr13:24914614..24914622, - |
| 1.64e-40 | FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_a38ae35a52b188433c0880c59958102c | p1@PAX1 |
| 1.64e-40 | FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_a38ae35a52b188433c0880c59958102c | p1@PAX1 |
| 1.81e-40 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_4514e777bbbe011bd3d756b9c761e139 | p5@PTGFR |
| 1.81e-40 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_4514e777bbbe011bd3d756b9c761e139 | p5@PTGFR |
| 2.13e-40 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_b0ad7eee6dcffeba22b4e4c09ff877c4 | p@chr2:241897363..241897398, + |
| 2.13e-40 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_b0ad7eee6dcffeba22b4e4c09ff877c4 | p@chr2:241897363..241897398, + |
| 3.04e-39 | FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_fedce8696603c8f08a36ef9dce957b2f | p2@PAX1 |
| 3.04e-39 | FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_fedce8696603c8f08a36ef9dce957b2f | p2@PAX1 |
| 7.19e-39 | FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_3af5f3234befbde9f24354abd1091390 | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_3af5f3234befbde9f24354abd1091390 | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_3af5f3234befbde9f24354abd1091390 | p@chr5:140887761..140887777, + |
| 7.19e-39 | FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_3af5f3234befbde9f24354abd1091390 | p@chr5:140887761..140887777, + |
| 1.24e-38 | FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_d498fb9cde6ebefd7bd8b6b00ee664a3 | p4@NUP54 |
| 1.24e-38 | FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_d498fb9cde6ebefd7bd8b6b00ee664a3 | p4@NUP54 |
| 2.08e-38 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_0294de9ca901857ff7eea169825d86e7 | p@chr2:241938405..241938416, + |
| 2.08e-38 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_0294de9ca901857ff7eea169825d86e7 | p@chr2:241938405..241938416, + |
| 3.34e-38 | FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_d69c61e31799ad1d70d8826e10125a72 | p1@NKX3-2 |
| 3.34e-38 | FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_d69c61e31799ad1d70d8826e10125a72 | p1@NKX3-2 |
| 3.68e-38 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_1d44aa34895ac3eb0ee270b40c53623d | p10@SYNJ2 |
| 3.68e-38 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_1d44aa34895ac3eb0ee270b40c53623d | p10@SYNJ2 |
| 5.39e-38 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_000612681434dc3bfad37c05e58fff24 | p@chr9:16138889..16138902, - |
| 5.39e-38 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_000612681434dc3bfad37c05e58fff24 | p@chr9:16138889..16138902, - |
| 8.66e-38 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_e7a0f77166265d51ee3f126254a4da04 | p2@ENST00000518706 |
| 8.66e-38 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_e7a0f77166265d51ee3f126254a4da04 | p2@ENST00000518706 |
| 2.96e-37 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_d3087195817cc3f4afd62232b8bde7da | p1@ENST00000436845 |
| 2.96e-37 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_d3087195817cc3f4afd62232b8bde7da | p1@ENST00000436845 |
| 6.92e-37 | FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_b367902a56ceb588e7d3f4341c738f7d | p12@CDK5RAP2 |
| 6.92e-37 | FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_b367902a56ceb588e7d3f4341c738f7d | p12@CDK5RAP2 |
| 3.28e-36 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_0cc299e3779dc21d44d16618b70914cd | p1@ENST00000413519 |
| 3.28e-36 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_0cc299e3779dc21d44d16618b70914cd | p1@ENST00000413519 |
| 9.62e-35 | FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_074b46a530c1936972defb44a639fd21 | p4@PAX9 |
| 9.62e-35 | FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_074b46a530c1936972defb44a639fd21 | p4@PAX9 |
| 1.8e-34 | FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_2b324352ad8b9956c045bc1dd115d83b | p@chr7:100202784..100202796, - |
| 1.8e-34 | FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_2b324352ad8b9956c045bc1dd115d83b | p@chr7:100202784..100202796, - |
| 3.69e-34 | FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_8115095d6791064635f742872ce213fe | p8@HOXC6 |
| 3.69e-34 | FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_8115095d6791064635f742872ce213fe | p8@HOXC6 |
| 5.52e-34 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_28278431e313aeef9423b09931ddedb1 | p6@CCDC86 |
| 5.52e-34 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_28278431e313aeef9423b09931ddedb1 | p6@CCDC86 |
| 1.43e-33 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_71eaef78e75b0bb5db9deba9fb7dbde1 | p@chr20:21695435..21695452, + |
| 1.43e-33 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_71eaef78e75b0bb5db9deba9fb7dbde1 | p@chr20:21695435..21695452, + |
| 5.36e-33 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_a896b1d3466d3d1b9148615f66826661 | p@chr16:70795228..70795237, + |
| 5.36e-33 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_a896b1d3466d3d1b9148615f66826661 | p@chr16:70795228..70795237, + |
| 1.05e-32 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_e8d48f88a6c7259fdabcf8fb47601016 | p@chr3:158384350..158384362, - |
| 1.05e-32 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_e8d48f88a6c7259fdabcf8fb47601016 | p@chr3:158384350..158384362, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_ea3039584e41f7726502745c5edf4b58 | p9@CYTIP |
| 1.7e-32 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_ea3039584e41f7726502745c5edf4b58 | p9@CYTIP |
| 2.34e-32 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_3efccf293b705a5383e4b42be489be12 | p@chr18:12012068..12012098, + |
| 2.34e-32 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_3efccf293b705a5383e4b42be489be12 | p@chr18:12012068..12012098, + |
| 2.79e-31 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_6ee1389d8b42f1d0feacbc6b040e946a | p1@ENST00000555639 |
| 2.79e-31 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_6ee1389d8b42f1d0feacbc6b040e946a | p1@ENST00000555639 |
