UBERON:0006555: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=excretory tube | |name=excretory tube | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001008 | |part_of=UBERON:0001008 | ||
Latest revision as of 17:57, 12 September 2014
| Name: | excretory tube |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90368977..90368987, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Defb23 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164434346..164434353, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155722..90155743, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:22547027..22547063, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Spink10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24865194..24865204, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62816857..62816866,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Spink10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280199..50280211, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:61976287..61976297, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936238..87936249, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Atp4a |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773580..110773589, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75304916..75304925, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21385325..21385329, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155698178..155698191, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44261480..44261486, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:34107586..34107593, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378296..21378303, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm3428 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:54678915..54678922, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845349..59845371,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:72756032..72756041, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:192816674..192816714, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm3428 |
