UBERON:0010743: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=meningeal cluster | |name=meningeal cluster | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
Latest revision as of 18:09, 12 September 2014
| Name: | meningeal cluster | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The collection of all meningeal layers that line a central nervous system." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"cluster of meninges" EXACT [FMA:231572] "meninges" EXACT [FMA:231572] | ||
| Comments: | In some primitive organisms, the meningeal cluster includes only the primitive meninx |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000477(anatomical cluster),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest) |
|---|---|
| part_of: | UBERON:0001017(central nervous system) |
Children
| part of: | UBERON:0002360 (meninx),UBERON:0007645 (future meninx) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10041-101F5 (dura mater, adult, donor1)
- 10188-103D8 (cerebral meninges, adult)
- 10265-104D4
- 10279-104E9
- 10293-104G5
- 10307-104I1
- 10321-105A6
- 10335-105C2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010743 (meningeal cluster), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.75e-130 | FFCP PHASE1:Hg19::chr6:55740051..55740056,-#_c29b757236f6aeda0b280c92eff4821c | p5@BMP5 |
| 1.75e-130 | FFCP PHASE2:Hg19::chr6:55740051..55740056,-#_c29b757236f6aeda0b280c92eff4821c | p5@BMP5 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:112931366..112931373,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931366..112931373, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:122434930..122434939,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr5:122434930..122434939, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:79398656..79398666,-#_5be9c452e68ced1858d2a70427bb3da4 | p25@KCNMA1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:48651813..48651830,-#_5be9c452e68ced1858d2a70427bb3da4 | p14@CEBPD |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:112931366..112931373,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931366..112931373, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:112931383..112931390,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931383..112931390, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:79398656..79398666,-#_5be9c452e68ced1858d2a70427bb3da4 | p25@KCNMA1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:217560615..217560623,-#_5be9c452e68ced1858d2a70427bb3da4 | p73@IGFBP5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:112931383..112931390,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931383..112931390, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:112931404..112931414,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931404..112931414, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:45234395..45234400,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr2:45234395..45234400, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:217560615..217560623,-#_5be9c452e68ced1858d2a70427bb3da4 | p73@IGFBP5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:112931404..112931414,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931404..112931414, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:112931435..112931445,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931435..112931445, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:154712764..154712772,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr4:154712764..154712772, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:45234395..45234400,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr2:45234395..45234400, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:43349847..43349852,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr8:43349847..43349852, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:39892092..39892099,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr5:39892092..39892099, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:78078199..78078208,+#_5be9c452e68ced1858d2a70427bb3da4 | p8@C10orf11 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:112931435..112931445,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr3:112931435..112931445, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:154712764..154712772,-#_5be9c452e68ced1858d2a70427bb3da4 | p@chr4:154712764..154712772, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:122434930..122434939,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr5:122434930..122434939, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:43349847..43349852,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr8:43349847..43349852, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:39892092..39892099,+#_5be9c452e68ced1858d2a70427bb3da4 | p@chr5:39892092..39892099, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:78078199..78078208,+#_5be9c452e68ced1858d2a70427bb3da4 | p8@C10orf11 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:48651813..48651830,-#_5be9c452e68ced1858d2a70427bb3da4 | p14@CEBPD |
| 1.16e-78 | FFCP PHASE1:Hg19::chr2:18695697..18695706,-#_a7272e415b6a1dece27c9e26d350a68b | p@chr2:18695697..18695706, - |
| 1.16e-78 | FFCP PHASE2:Hg19::chr2:18695697..18695706,-#_a7272e415b6a1dece27c9e26d350a68b | p@chr2:18695697..18695706, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr18:14221875..14221879,-#_7b158a2ac0951da74af2ec507999e313 | p@chr18:14221875..14221879, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:72274182..72274188,-#_7b158a2ac0951da74af2ec507999e313 | p18@EYA1 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr19:2309357..2309359,+#_7b158a2ac0951da74af2ec507999e313 | p@chr19:2309357..2309359, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr1:66031903..66031907,+#_7b158a2ac0951da74af2ec507999e313 | p@chr1:66031903..66031907, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:154711058..154711075,+#_7b158a2ac0951da74af2ec507999e313 | p@chr4:154711058..154711075, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr9:23524699..23524703,-#_7b158a2ac0951da74af2ec507999e313 | p@chr9:23524699..23524703, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr3:147794257..147794262,+#_7b158a2ac0951da74af2ec507999e313 | p@chr3:147794257..147794262, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:43349758..43349771,+#_7b158a2ac0951da74af2ec507999e313 | p@chr8:43349758..43349771, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr19:2309357..2309359,+#_7b158a2ac0951da74af2ec507999e313 | p@chr19:2309357..2309359, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr1:66031903..66031907,+#_7b158a2ac0951da74af2ec507999e313 | p@chr1:66031903..66031907, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:154711058..154711075,+#_7b158a2ac0951da74af2ec507999e313 | p@chr4:154711058..154711075, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr3:147794257..147794262,+#_7b158a2ac0951da74af2ec507999e313 | p@chr3:147794257..147794262, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr9:23524699..23524703,-#_7b158a2ac0951da74af2ec507999e313 | p@chr9:23524699..23524703, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:43349758..43349771,+#_7b158a2ac0951da74af2ec507999e313 | p@chr8:43349758..43349771, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:43349794..43349803,+#_7b158a2ac0951da74af2ec507999e313 | p@chr8:43349794..43349803, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr7:115135068..115135092,-#_7b158a2ac0951da74af2ec507999e313 | p@chr7:115135068..115135092, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:73094120..73094122,-#_7b158a2ac0951da74af2ec507999e313 | p@chr16:73094120..73094122, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr18:14221875..14221879,-#_7b158a2ac0951da74af2ec507999e313 | p@chr18:14221875..14221879, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:43349794..43349803,+#_7b158a2ac0951da74af2ec507999e313 | p@chr8:43349794..43349803, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr7:115135068..115135092,-#_7b158a2ac0951da74af2ec507999e313 | p@chr7:115135068..115135092, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:72274182..72274188,-#_7b158a2ac0951da74af2ec507999e313 | p18@EYA1 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:73094120..73094122,-#_7b158a2ac0951da74af2ec507999e313 | p@chr16:73094120..73094122, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:65990750..65990756,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p@chr1:65990750..65990756, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:183775501..183775512,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p13@RGL1 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:183775501..183775512,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p13@RGL1 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr11:44360838..44360846,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p@chr11:44360838..44360846, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr11:44360838..44360846,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p@chr11:44360838..44360846, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:65990750..65990756,+#_2e6bd6d4e76ce658e65011b0c1ac9a50 | p@chr1:65990750..65990756, + |
| 4.49e-40 | FFCP PHASE2:Hg19::chr9:74167593..74167609,-#_5bcb78876d1236632ac82c5a7dc35b70 | p@chr9:74167593..74167609, - |
| 4.49e-40 | FFCP PHASE1:Hg19::chr9:74167593..74167609,-#_5bcb78876d1236632ac82c5a7dc35b70 | p@chr9:74167593..74167609, - |
| 3.28e-37 | FFCP PHASE1:Hg19::chr2:201521549..201521593,+#_09e94271aac40aafcdeae7f09a02c05b | p@chr2:201521549..201521593, + |
| 3.28e-37 | FFCP PHASE2:Hg19::chr2:201521549..201521593,+#_09e94271aac40aafcdeae7f09a02c05b | p@chr2:201521549..201521593, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_582abcc2bd38c89694d9fc1ae3eed36d | p47@RBPJ |
| 3.61e-34 | FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr3:112931461..112931474, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr2:45715445..45715482,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr2:45715445..45715482, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_582abcc2bd38c89694d9fc1ae3eed36d | p47@RBPJ |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:154711263..154711272,+#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr4:154711263..154711272, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr9:23524722..23524736,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr9:23524722..23524736, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:154711263..154711272,+#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr4:154711263..154711272, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr9:23524722..23524736,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr9:23524722..23524736, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr9:23524772..23524783,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr9:23524772..23524783, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr3:112931461..112931474, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr9:23524772..23524783,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr9:23524772..23524783, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr2:45715445..45715482,-#_582abcc2bd38c89694d9fc1ae3eed36d | p@chr2:45715445..45715482, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:176047686..176047693,-#_a5877810db267f5218650cf3fb79003a | p@chr5:176047686..176047693, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr17:53398728..53398764,+#_a5877810db267f5218650cf3fb79003a | p@chr17:53398728..53398764, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:176047686..176047693,-#_a5877810db267f5218650cf3fb79003a | p@chr5:176047686..176047693, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:175223687..175223688,+#_a5877810db267f5218650cf3fb79003a | p29@CPLX2 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr1:1914706..1914716,-#_a5877810db267f5218650cf3fb79003a | p@chr1:1914706..1914716, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr17:53398728..53398764,+#_a5877810db267f5218650cf3fb79003a | p@chr17:53398728..53398764, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:175223687..175223688,+#_a5877810db267f5218650cf3fb79003a | p29@CPLX2 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr1:1914706..1914716,-#_a5877810db267f5218650cf3fb79003a | p@chr1:1914706..1914716, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr2:44903688..44903705,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p7@CAMKMT |
| 7.05e-34 | FFCP PHASE2:Hg19::chr13:66878571..66878580,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr13:66878571..66878580, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr2:44903688..44903705,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p7@CAMKMT |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:157069619..157069633,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p3@ETV3L |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:102487198..102487211,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr6:102487198..102487211, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:157069619..157069633,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p3@ETV3L |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:102487198..102487211,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr6:102487198..102487211, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr13:66878571..66878580,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr13:66878571..66878580, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr20:36979501..36979520,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr20:36979501..36979520, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:44360939..44360945,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr11:44360939..44360945, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:44360939..44360945,+#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr11:44360939..44360945, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr20:36979501..36979520,-#_9a137a171c9a7de7bdc00c1ca128fc58 | p@chr20:36979501..36979520, - |
| 4.04e-31 | FFCP PHASE2:Hg19::chr6:160679846..160679859,-#_c7deeef6991d7f7aa1c3844e07844484 | p1@SLC22A2 |
| 4.04e-31 | FFCP PHASE1:Hg19::chr6:160679846..160679859,-#_c7deeef6991d7f7aa1c3844e07844484 | p1@SLC22A2 |
| 1.02e-30 | FFCP PHASE1:Hg19::chr8:17351823..17351832,+#_54dadf37bf4f2b39f07234dc9090d941 | p@chr8:17351823..17351832, + |
| 1.02e-30 | FFCP PHASE2:Hg19::chr8:17351823..17351832,+#_54dadf37bf4f2b39f07234dc9090d941 | p@chr8:17351823..17351832, + |
| 4.08e-26 | FFCP PHASE1:Hg19::chr20:4904851..4904855,-#_fc4f11547d4b8c3715c3e867b392294d | p@chr20:4904851..4904855, - |
| 4.08e-26 | FFCP PHASE2:Hg19::chr20:4904851..4904855,-#_fc4f11547d4b8c3715c3e867b392294d | p@chr20:4904851..4904855, - |
