FFCP PHASE1:Hg19::chr11:119599846..119599857,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9706 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15223 | ||
|association_with_transcript=-52bp_to_ENST00000264025_5end | |association_with_transcript=-52bp_to_ENST00000264025_5end | ||
|cluster_id=chr11:119599846..119599857,- | |cluster_id=chr11:119599846..119599857,- |
Latest revision as of 04:18, 16 September 2015
Short description: | p4@PVRL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PVRL1_5end |
Coexpression cluster: | C3096_Urothelial_Small_Corneal_Prostate_Esophageal_Bronchial_cervical |
Association with transcript: | -52bp_to_ENST00000264025_5end |
EntrezGene: | PVRL1 |
HGNC: | 9706 |
UniProt: | Q15223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@PVRL1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endo-epithelial cell | 1.64e-18 | 42 |
respiratory epithelial cell | 8.80e-18 | 13 |
endodermal cell | 1.44e-13 | 58 |
transitional epithelial cell | 9.36e-13 | 4 |
urothelial cell | 9.36e-13 | 4 |
general ecto-epithelial cell | 3.29e-12 | 14 |
stratified squamous epithelial cell | 1.67e-11 | 6 |
keratin accumulating cell | 1.67e-11 | 6 |
stratified epithelial cell | 1.67e-11 | 6 |
keratinizing barrier epithelial cell | 1.67e-11 | 6 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
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urothelium | 7.05e-15 | 5 |
transitional epithelium | 2.47e-12 | 6 |
ecto-epithelium | 2.43e-08 | 104 |
multi cell component structure | 6.14e-07 | 2 |
neuron projection bundle | 6.14e-07 | 2 |
Showing 1 to 5 of 5 entries