FFCP PHASE1:Hg19::chr11:65779257..65779267,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2478 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15828 | ||
|association_with_transcript=-44bp_to_ENST00000312134_5end | |association_with_transcript=-44bp_to_ENST00000312134_5end | ||
|cluster_id=chr11:65779257..65779267,+ | |cluster_id=chr11:65779257..65779267,+ | ||
Latest revision as of 12:50, 19 September 2015
| Short description: | p6@CST6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_CST6_5end |
| Coexpression cluster: | C1349_Alveolar_bile_chorionic_clear_amniotic_papillotubular_serous |
| Association with transcript: | -44bp_to_ENST00000312134_5end |
| EntrezGene: | CST6 |
| HGNC: | 2478 |
| UniProt: | Q15828 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@CST6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 1.89e-50 | 3 |
| extraembryonic cell | 5.45e-22 | 19 |
| amnion mesenchymal stem cell | 2.58e-14 | 5 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 1.89e-50 | 3 |
| extraembryonic membrane | 9.03e-30 | 14 |
| membranous layer | 9.03e-30 | 14 |
| chorion | 4.28e-22 | 7 |
| hepatopancreatic ampulla | 4.44e-18 | 1 |
| extrahepatic bile duct | 4.44e-18 | 1 |
| common bile duct | 4.44e-18 | 1 |
| duodenal papilla | 4.44e-18 | 1 |
| extraembryonic structure | 1.93e-17 | 24 |
| duct | 2.72e-14 | 19 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| cystadenocarcinoma | 1.03e-17 | 1 |
| mucinous cystadenocarcinoma | 1.03e-17 | 1 |
| tubular adenocarcinoma | 1.03e-09 | 2 |
| clear cell adenocarcinoma | 1.86e-09 | 2 |
| lung adenocarcinoma | 2.02e-09 | 2 |
Showing 1 to 5 of 5 entries
