FFCP PHASE1:Hg19::chr2:102091478..102091490,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=731220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=37253 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6ZV50,E9PDA6 | ||
|association_with_transcript=-313bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |association_with_transcript=-313bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | ||
|cluster_id=chr2:102091478..102091490,- | |cluster_id=chr2:102091478..102091490,- |
Latest revision as of 00:08, 16 September 2015
Short description: | p3@RFX8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFX8_5end |
Coexpression cluster: | NA |
Association with transcript: | -313bp_to_ENST00000428343, ENST00000481179, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@RFX8 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.34e-22 | 23 |
fibroblast of dermis | 8.22e-18 | 6 |
fibroblast | 2.82e-17 | 76 |
multi fate stem cell | 4.54e-17 | 427 |
somatic stem cell | 1.26e-16 | 433 |
stem cell | 4.70e-16 | 441 |
mesenchymal cell | 8.40e-15 | 354 |
connective tissue cell | 3.00e-14 | 361 |
motile cell | 5.50e-14 | 386 |
cardiac mesenchymal cell | 1.95e-11 | 4 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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dermis | 1.81e-15 | 9 |
dermatome | 1.81e-15 | 9 |
future dermis | 1.81e-15 | 9 |
integument | 2.30e-14 | 46 |
integumental system | 2.30e-14 | 46 |
connective tissue | 1.69e-13 | 371 |
skin of body | 1.43e-12 | 41 |
left ovary | 4.20e-12 | 4 |
female gonad | 4.19e-10 | 13 |
surface structure | 1.58e-08 | 99 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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ovarian cancer | 2.02e-15 | 14 |
musculoskeletal system disease | 9.83e-10 | 5 |
myotonic disease | 9.83e-10 | 5 |
muscle tissue disease | 9.83e-10 | 5 |
myopathy | 9.83e-10 | 5 |
muscular disease | 9.83e-10 | 5 |
myotonic dystrophy | 9.83e-10 | 5 |
female reproductive organ cancer | 3.70e-07 | 27 |
Showing 1 to 8 of 8 entries