FFCP PHASE2:Hg19::chr6:152623434..152623449,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17089 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 06:36, 16 September 2015
Short description: | p21@SYNE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000489156_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p21@SYNE1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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macrophage | 7.82e-36 | 6 |
defensive cell | 1.07e-31 | 48 |
phagocyte | 1.07e-31 | 48 |
granulocyte monocyte progenitor cell | 5.14e-25 | 67 |
monopoietic cell | 7.00e-25 | 59 |
monocyte | 7.00e-25 | 59 |
monoblast | 7.00e-25 | 59 |
promonocyte | 7.00e-25 | 59 |
macrophage dendritic cell progenitor | 5.31e-24 | 61 |
myeloid lineage restricted progenitor cell | 4.97e-22 | 66 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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bone element | 4.97e-23 | 82 |
bone marrow | 8.67e-22 | 76 |
skeletal element | 9.23e-21 | 90 |
skeletal system | 1.98e-18 | 100 |
immune system | 2.25e-17 | 93 |
hematopoietic system | 2.31e-16 | 98 |
blood island | 2.31e-16 | 98 |
hemolymphoid system | 1.28e-14 | 108 |
musculoskeletal system | 6.00e-10 | 167 |
lower lobe of right lung | 1.48e-09 | 1 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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chondrosarcoma | 4.87e-10 | 1 |
extraosseous chondrosarcoma | 4.87e-10 | 1 |
myxoid chondrosarcoma | 4.87e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 4.87e-10 | 1 |
Showing 1 to 4 of 4 entries