FFCP PHASE2:Hg19::chr7:38358578..38358595,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene= |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding |HGNC=HGNC:12295 |TSSclassifier=strong |UniProt= |...") |
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|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC= | |HGNC=12295 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 12:39, 18 September 2015
Short description: | p1@TRGV9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRGV9_5end |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | -116bp_to_ENST00000444775_5end |
EntrezGene: | NA |
HGNC: | 12295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TRGV9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.79e-26 | 1 |
immature NK T cell | 9.79e-26 | 1 |
effector T cell | 9.79e-26 | 1 |
mature NK T cell | 9.79e-26 | 1 |
immature NK T cell stage IV | 9.79e-26 | 1 |
immature NK T cell stage I | 9.79e-26 | 1 |
immature NK T cell stage II | 9.79e-26 | 1 |
immature NK T cell stage III | 9.79e-26 | 1 |
mature alpha-beta T cell | 2.15e-22 | 18 |
alpha-beta T cell | 2.15e-22 | 18 |
Showing 1 to 10 of 35 entries
Ontology term | p-value | n |
---|---|---|
thymus | 1.92e-07 | 4 |
hemolymphoid system gland | 1.92e-07 | 4 |
thymic region | 1.92e-07 | 4 |
pharyngeal gland | 1.92e-07 | 4 |
thymus primordium | 1.92e-07 | 4 |
Showing 1 to 5 of 5 entries