FFCP PHASE2:Hg19::chr8:145020785..145020804,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5339 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9069 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9069 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PQ28 | ||
|association_with_transcript=-70bp_to_ENST00000527816_5end | |association_with_transcript=-70bp_to_ENST00000527816_5end | ||
|cluster_id=chr8:145020785..145020804,- | |cluster_id=chr8:145020785..145020804,- | ||
Latest revision as of 23:55, 16 September 2015
| Short description: | p22@PLEC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_22_at_PLEC_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -70bp_to_ENST00000527816_5end |
| EntrezGene: | PLEC |
| HGNC: | 9069 |
| UniProt: | E9PQ28 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p22@PLEC |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 1.40e-10 | 9 |
| carbohydrate secreting cell | 1.40e-10 | 9 |
| extracellular matrix secreting cell | 4.66e-08 | 15 |
| chondroblast | 7.08e-08 | 6 |
| chondrocyte | 7.08e-08 | 6 |
| fibroblast | 9.10e-08 | 76 |
| stromal cell | 9.37e-08 | 28 |
| pericyte cell | 6.87e-07 | 4 |
| cell of skeletal muscle | 9.45e-07 | 9 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 3.77e-09 | 5 |
| myotonic disease | 3.77e-09 | 5 |
| muscle tissue disease | 3.77e-09 | 5 |
| myopathy | 3.77e-09 | 5 |
| muscular disease | 3.77e-09 | 5 |
| myotonic dystrophy | 3.77e-09 | 5 |
Showing 1 to 6 of 6 entries
