UBERON:0004638: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0004638
|name=blood vessel endothelium
|namespace=
|def="An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the ...") |
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|part_of=UBERON:0001981 | |part_of=UBERON:0001981 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:20, 15 June 2012
| Name: | blood vessel endothelium | |
|---|---|---|
| Definition: | "An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart" [UBERON:cjm] | |
| Xrefs: |
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| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0004852(cardiovascular system endothelium) |
|---|---|
| part_of: | UBERON:0001981(blood vessel) |
Children
| is a: | UBERON:0001915 (endothelium of capillary),UBERON:0001917 (endothelium of artery),UBERON:2005260 (fenestrated capillary) |
|---|---|
| part of: | CL:0000071 (blood vessel endothelial cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004638 (blood vessel endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
