CL:0002319: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002319
|name=neural cell
|namespace=cell
|def="A cell that is part of the nervous system." [GOC:tfm, ISBN:0618947256]
|xref=FMA:70333
|is_a=CL:0000548;;CL:0...") |
No edit summary |
||
Line 20: | Line 20: | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:40, 15 June 2012
Name: | neural cell | |
---|---|---|
Namespace: | cell | |
Definition: | "A cell that is part of the nervous system." [GOC:tfm, ISBN:0618947256] | |
Xrefs: |
| |
Created by: | tmeehan | |
Creation date: | 2010-09-15T01:34:57Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000548(animal cell),CL:0002371(somatic cell) |
---|
Children
is a: | CL:0000047 (neuronal stem cell),CL:0000095 (neuron associated cell),CL:0000540 (neuron),CL:0000708 (leptomeningeal cell),CL:0000878 (central nervous system macrophage),CL:0002549 (fibroblast of choroid plexus),CL:0002575 (central nervous system pericyte),CL:0002576 (perineural cell),CL:0002590 (smooth muscle cell of the brain vasculature) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10413-106B8 (glioma cell line:GI-1)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10444-106F3 (glioblastoma cell line:A172)
- 10456-106G6
- 10475-106I7 (retinoblastoma cell line:Y79)
- 10485-107A8 (glioblastoma cell line:T98G)
- 10559-108A1
- 10669-109D3
- 10670-109D4
... further results Mouse (Mus musculus)
- 10413-106B8 (glioma cell line:GI-1)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10444-106F3 (glioblastoma cell line:A172)
- 10456-106G6
- 10475-106I7 (retinoblastoma cell line:Y79)
- 10485-107A8 (glioblastoma cell line:T98G)
- 10559-108A1
- 10669-109D3
- 10670-109D4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002319 (neural cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data