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|namespace=
|namespace=
|def="The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator]
|def="The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator]
|xref=EHDAA2:0000229;;EMAPA:17074;;XAO:0004135;;ZFA:0001440
|xref=EHDAA2:0000229;;EMAPA:17074;;TAO:0001440;;XAO:0004135;;ZFA:0001440
|is_a=UBERON:0001048
|is_a=UBERON:0001048
|synonym="cerebellum primordium" RELATED [EMAPA:17074];;"dorsal part of alar plate of metencephalon" RELATED [EMAPA:17074]
|synonym="cerebellum primordium" RELATED [EMAPA:17074];;"dorsal part of alar plate of metencephalon" RELATED [EMAPA:17074]
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|obo_creation_date=
|obo_creation_date=
|subset=vertebrate_core
|subset=vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002028
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain.[TAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:07, 26 June 2012

Name:rhombic lip
Definition:"The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator]
Xrefs:
links:

EHDAA2:0000229
EMAPA:17074
TAO:0001440
XAO:0004135

ZFA:0001440
Synonyms: "cerebellum primordium" RELATED [EMAPA:17074]
"dorsal part of alar plate of metencephalon" RELATED [EMAPA:17074]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001048(primordium)



Children

develops from:UBERON:0002037 (cerebellum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006215 (rhombic lip), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.83e-98FFCP PHASE1:Hg19::chr3:22062741..22062742,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:22062741..22062742, -
1.83e-98FFCP PHASE2:Hg19::chr1:244355180..244355201,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr1:244355180..244355201, +
1.83e-98FFCP PHASE2:Hg19::chr18:5197269..5197276,-#_313c5c6a1300570bfbc9c72afbf5a297p7@C18orf42
1.83e-98FFCP PHASE2:Hg19::chr16:4731350..4731363,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:4731350..4731363, +
1.83e-98FFCP PHASE2:Hg19::chrX:71131166..71131173,+#_313c5c6a1300570bfbc9c72afbf5a297p@chrX:71131166..71131173, +
1.83e-98FFCP PHASE1:Hg19::chr5:161112767..161112774,+#_313c5c6a1300570bfbc9c72afbf5a297p5@GABRA6
1.83e-98FFCP PHASE2:Hg19::chr11:133902562..133902580,+#_313c5c6a1300570bfbc9c72afbf5a297p1@ENST00000529070
1.83e-98FFCP PHASE2:Hg19::chr10:71562284..71562291,+#_313c5c6a1300570bfbc9c72afbf5a297p14@COL13A1
1.83e-98FFCP PHASE2:Hg19::chr7:99995188..99995194,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr7:99995188..99995194, +
1.83e-98FFCP PHASE2:Hg19::chr17:588406..588409,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr17:588406..588409, -
1.83e-98FFCP PHASE2:Hg19::chr6:31334809..31334819,-#_313c5c6a1300570bfbc9c72afbf5a297p1@DHFRP2
1.83e-98FFCP PHASE1:Hg19::chr6:34041419..34041429,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr6:34041419..34041429, -
1.83e-98FFCP PHASE1:Hg19::chr7:29237354..29237369,+#_313c5c6a1300570bfbc9c72afbf5a297p32@CHN2
1.83e-98FFCP PHASE2:Hg19::chr15:81489302..81489313,+#_313c5c6a1300570bfbc9c72afbf5a297p20@IL16
1.83e-98FFCP PHASE2:Hg19::chr7:14025135..14025147,-#_313c5c6a1300570bfbc9c72afbf5a297p42@ETV1
1.83e-98FFCP PHASE2:Hg19::chr16:49313357..49313362,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:49313357..49313362, -
1.83e-98FFCP PHASE1:Hg19::chr16:3656616..3656628,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:3656616..3656628, -
1.83e-98FFCP PHASE2:Hg19::chr3:9165885..9165918,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:9165885..9165918, +
1.83e-98FFCP PHASE2:Hg19::chr3:22108225..22108233,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:22108225..22108233, -
1.83e-98FFCP PHASE2:Hg19::chr2:39116996..39117003,+#_313c5c6a1300570bfbc9c72afbf5a297p7@ARHGEF33
1.83e-98FFCP PHASE2:Hg19::chrX:105192423..105192431,+#_313c5c6a1300570bfbc9c72afbf5a297p8@NRK
1.83e-98FFCP PHASE1:Hg19::chr17:48545700..48545707,+#_313c5c6a1300570bfbc9c72afbf5a297p5@ACSF2
1.83e-98FFCP PHASE2:Hg19::chr7:44308399..44308433,-#_313c5c6a1300570bfbc9c72afbf5a297p17@CAMK2B
1.83e-98FFCP PHASE2:Hg19::chr6:72922559..72922568,+#_313c5c6a1300570bfbc9c72afbf5a297p28@RIMS1
1.83e-98FFCP PHASE1:Hg19::chr16:58496260..58496271,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:58496260..58496271, +
1.83e-98FFCP PHASE2:Hg19::chr16:23419354..23419361,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:23419354..23419361, +
1.83e-98FFCP PHASE2:Hg19::chr4:117873869..117873879,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr4:117873869..117873879, -
1.83e-98FFCP PHASE1:Hg19::chr8:17579304..17579321,-#_313c5c6a1300570bfbc9c72afbf5a297p40@MTUS1
1.83e-98FFCP PHASE2:Hg19::chr7:1277107..1277145,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr7:1277107..1277145, -
1.83e-98FFCP PHASE2:Hg19::chr17:48545700..48545707,+#_313c5c6a1300570bfbc9c72afbf5a297p5@ACSF2
1.83e-98FFCP PHASE2:Hg19::chr21:47268058..47268079,+#_313c5c6a1300570bfbc9c72afbf5a297p5@PCBP3
1.83e-98FFCP PHASE2:Hg19::chr3:147139238..147139247,+#_313c5c6a1300570bfbc9c72afbf5a297p26@ZIC1
1.83e-98FFCP PHASE1:Hg19::chr10:71562284..71562291,+#_313c5c6a1300570bfbc9c72afbf5a297p14@COL13A1
1.83e-98FFCP PHASE2:Hg19::chr11:64120370..64120371,+#_313c5c6a1300570bfbc9c72afbf5a297p16@CCDC88B
1.83e-98FFCP PHASE2:Hg19::chr21:32624498..32624505,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr21:32624498..32624505, -
1.83e-98FFCP PHASE1:Hg19::chr3:22108417..22108426,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:22108417..22108426, -
1.83e-98FFCP PHASE1:Hg19::chr7:119913819..119913824,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr7:119913819..119913824, -
1.83e-98FFCP PHASE1:Hg19::chr16:49357829..49357832,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:49357829..49357832, +
1.83e-98FFCP PHASE1:Hg19::chr14:52171354..52171361,+#_313c5c6a1300570bfbc9c72afbf5a297p43@FRMD6
1.83e-98FFCP PHASE1:Hg19::chr12:72667119..72667130,+#_313c5c6a1300570bfbc9c72afbf5a297p16@TRHDE
1.83e-98FFCP PHASE1:Hg19::chr5:161113284..161113295,+#_313c5c6a1300570bfbc9c72afbf5a297p7@GABRA6
1.83e-98FFCP PHASE1:Hg19::chr11:133821982..133821993,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr11:133821982..133821993, -
1.83e-98FFCP PHASE1:Hg19::chr7:128518888..128518897,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr7:128518888..128518897, -
1.83e-98FFCP PHASE1:Hg19::chr4:93225050..93225057,+#_313c5c6a1300570bfbc9c72afbf5a297p11@GRID2
1.83e-98FFCP PHASE1:Hg19::chr16:608967..608994,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:608967..608994, +
1.83e-98FFCP PHASE2:Hg19::chr20:45062215..45062225,+#_313c5c6a1300570bfbc9c72afbf5a297p4@AK054905
1.83e-98FFCP PHASE2:Hg19::chr1:106499338..106499354,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr1:106499338..106499354, +
1.83e-98FFCP PHASE1:Hg19::chr18:39687774..39687782,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr18:39687774..39687782, +
1.83e-98FFCP PHASE2:Hg19::chr16:3656599..3656608,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:3656599..3656608, -
1.83e-98FFCP PHASE2:Hg19::chr14:77582887..77582896,+#_313c5c6a1300570bfbc9c72afbf5a297p12@TMEM63C
1.83e-98FFCP PHASE1:Hg19::chr11:65999337..65999347,+#_313c5c6a1300570bfbc9c72afbf5a297p26@PACS1
1.83e-98FFCP PHASE1:Hg19::chr3:147141170..147141181,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:147141170..147141181, -
1.83e-98FFCP PHASE2:Hg19::chr17:72673744..72673754,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr17:72673744..72673754, -
1.83e-98FFCP PHASE1:Hg19::chr5:161112675..161112678,+#_313c5c6a1300570bfbc9c72afbf5a297p10@GABRA6
1.83e-98FFCP PHASE1:Hg19::chr2:39894333..39894353,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr2:39894333..39894353, -
1.83e-98FFCP PHASE1:Hg19::chr1:59775744..59775751,+#_313c5c6a1300570bfbc9c72afbf5a297p24@FGGY
1.83e-98FFCP PHASE1:Hg19::chr4:89680444..89680453,-#_313c5c6a1300570bfbc9c72afbf5a297p31@FAM13A
1.83e-98FFCP PHASE1:Hg19::chr20:45062007..45062020,+#_313c5c6a1300570bfbc9c72afbf5a297p7@AK054905
1.83e-98FFCP PHASE2:Hg19::chr18:8783620..8783627,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr18:8783620..8783627, +
1.83e-98FFCP PHASE1:Hg19::chr14:24898471..24898476,-#_313c5c6a1300570bfbc9c72afbf5a297p13@CBLN3
1.83e-98FFCP PHASE1:Hg19::chr17:72673771..72673779,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr17:72673771..72673779, -
1.83e-98FFCP PHASE1:Hg19::chr4:2257102..2257110,-#_313c5c6a1300570bfbc9c72afbf5a297p6@MXD4
1.83e-98FFCP PHASE1:Hg19::chr3:147114396..147114403,-#_313c5c6a1300570bfbc9c72afbf5a297p23@ZIC4
1.83e-98FFCP PHASE2:Hg19::chr22:51137783..51137794,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr22:51137783..51137794, +
1.83e-98FFCP PHASE2:Hg19::chr18:39687774..39687782,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr18:39687774..39687782, +
1.83e-98FFCP PHASE1:Hg19::chr11:123396575..123396583,+#_313c5c6a1300570bfbc9c72afbf5a297p9@GRAMD1B
1.83e-98FFCP PHASE2:Hg19::chr14:79746650..79746659,+#_313c5c6a1300570bfbc9c72afbf5a297p23@NRXN3
1.83e-98FFCP PHASE1:Hg19::chr12:113682304..113682315,+#_313c5c6a1300570bfbc9c72afbf5a297p17@TPCN1
1.83e-98FFCP PHASE2:Hg19::chr1:228602576..228602587,-#_313c5c6a1300570bfbc9c72afbf5a297p1@CU689740
1.83e-98FFCP PHASE1:Hg19::chr7:49815147..49815153,+#_313c5c6a1300570bfbc9c72afbf5a297p5@VWC2
1.83e-98FFCP PHASE1:Hg19::chr11:64146900..64146905,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr11:64146900..64146905, +
1.83e-98FFCP PHASE2:Hg19::chr1:24526024..24526028,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr1:24526024..24526028, +
1.83e-98FFCP PHASE1:Hg19::chr4:71928371..71928382,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr4:71928371..71928382, +
1.83e-98FFCP PHASE2:Hg19::chr2:149835072..149835078,+#_313c5c6a1300570bfbc9c72afbf5a297p39@KIF5C
1.83e-98FFCP PHASE1:Hg19::chr5:161112862..161112869,+#_313c5c6a1300570bfbc9c72afbf5a297p11@GABRA6
1.83e-98FFCP PHASE1:Hg19::chr1:106499338..106499354,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr1:106499338..106499354, +
1.83e-98FFCP PHASE1:Hg19::chr20:45062290..45062300,+#_313c5c6a1300570bfbc9c72afbf5a297p3@AK054905
1.83e-98FFCP PHASE1:Hg19::chr1:242613002..242613023,-#_313c5c6a1300570bfbc9c72afbf5a297p11@PLD5
1.83e-98FFCP PHASE1:Hg19::chr6:34046479..34046486,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr6:34046479..34046486, -
1.83e-98FFCP PHASE1:Hg19::chr4:3287626..3287633,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr4:3287626..3287633, +
1.83e-98FFCP PHASE2:Hg19::chr15:81489344..81489353,+#_313c5c6a1300570bfbc9c72afbf5a297p31@IL16
1.83e-98FFCP PHASE2:Hg19::chr13:100633107..100633110,+#_313c5c6a1300570bfbc9c72afbf5a297p7@AK298232
1.83e-98FFCP PHASE1:Hg19::chr14:77582934..77582947,+#_313c5c6a1300570bfbc9c72afbf5a297p9@TMEM63C
1.83e-98FFCP PHASE2:Hg19::chr3:22108366..22108373,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr3:22108366..22108373, -
1.83e-98FFCP PHASE1:Hg19::chr8:140666585..140666599,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr8:140666585..140666599, -
1.83e-98FFCP PHASE2:Hg19::chr2:202634440..202634472,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr2:202634440..202634472, -
1.83e-98FFCP PHASE2:Hg19::chr6:72922572..72922582,+#_313c5c6a1300570bfbc9c72afbf5a297p30@RIMS1
1.83e-98FFCP PHASE2:Hg19::chr5:161113132..161113181,+#_313c5c6a1300570bfbc9c72afbf5a297p9@GABRA6
1.83e-98FFCP PHASE1:Hg19::chr6:152884494..152884503,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr6:152884494..152884503, -
1.83e-98FFCP PHASE2:Hg19::chr4:93225020..93225031,+#_313c5c6a1300570bfbc9c72afbf5a297p@chr4:93225020..93225031, +
1.83e-98FFCP PHASE1:Hg19::chr14:24898354..24898366,-#_313c5c6a1300570bfbc9c72afbf5a297p8@CBLN3
1.83e-98FFCP PHASE2:Hg19::chr21:47314143..47314154,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr21:47314143..47314154, -
1.83e-98FFCP PHASE1:Hg19::chr20:44935658..44935665,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr20:44935658..44935665, -
1.83e-98FFCP PHASE1:Hg19::chr17:72667483..72667484,+#_313c5c6a1300570bfbc9c72afbf5a297p18@RAB37
1.83e-98FFCP PHASE2:Hg19::chr14:60048980..60048989,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr14:60048980..60048989, -
1.83e-98FFCP PHASE1:Hg19::chr18:66918040..66918047,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr18:66918040..66918047, -
1.83e-98FFCP PHASE2:Hg19::chr7:155302128..155302137,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr7:155302128..155302137, -
1.83e-98FFCP PHASE2:Hg19::chr22:32022290..32022297,-#_313c5c6a1300570bfbc9c72afbf5a297p30@PISD
1.83e-98FFCP PHASE2:Hg19::chr21:32624517..32624531,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr21:32624517..32624531, -
1.83e-98FFCP PHASE1:Hg19::chr16:612039..612048,-#_313c5c6a1300570bfbc9c72afbf5a297p@chr16:612039..612048, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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