UBERON:0006555: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:07, 26 June 2012
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:91753336..91753348, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712744..52712754, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:74440187..74440209, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26611214..26611227, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611201..63611210, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21381777..21381789, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379477..31379481, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:192816674..192816714, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:118298429..118298448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:160573108..160573123, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:74440187..74440209, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:156048695..156048707, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378871..21378901, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379550..31379559, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:150092027..150092070, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650730..103650741, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21385729..21385768, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141471..19141518, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm1110 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752183..25752203,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:25752183..25752203, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p19@Clu |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69143309..69143319, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155722142..155722175, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31377177..31377184, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:54678983..54678995, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379107..21379136, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:172632171..172632178, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959194..101959224,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959194..101959224, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26727675..26727681, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164434157..164434162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155707..90155720, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Wdr25 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Defb43 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103746280..103746298,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103746280..103746298, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155697874..155697885, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651679..35651691,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761885..70761895, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Defb44-ps |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p21@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676919..148676930,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230104L09Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:116399500..116399516, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496260..130496269, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:107073888..107073914, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221034..73221051, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19142604..19142612,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19142604..19142612, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134913640..134913649, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:51670340..51670346, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:85390145..85390153, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70779586..70779596, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:114385720..114385732, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:39707572..39707583, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21380610..21380620, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p19@Clu |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:92995710..92995753, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:156829476..156829504, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Acad8 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:67453354..67453365, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378296..21378303, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:156048695..156048707, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798114..75798125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379437..31379448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24670830..24670845, + |
