UBERON:0006555: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001008 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:25706074..25706082,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Ido1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134913640..134913649, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:49817766..49817772, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221016..73221031, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:100350777..100350782, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379878..31379883,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379878..31379883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:167688595..167688624, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155707..90155720,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155707..90155720, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378774..21378782, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959194..101959224, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141471..19141518, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302768..152302774,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:112721323..112721328, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:54359310..54359337, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21383212..21383225, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:66521865..66521876, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:75559819..75559830, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Prrx1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164479340..164479350,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24670830..24670845, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@9230104L09Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89596972..89596981, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:96014490..96014496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:23057222..23057234,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Defb13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:40010825..40010844, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:56515486..56515496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:113585714..113585722, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651788..35651804,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:172632171..172632178, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:167480413..167480463, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20422498..20422506, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:14306714..14306740, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:127470322..127470326, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:43230846..43230884, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:103276578..103276585, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Gm17727 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26688157..26688159, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103746280..103746298, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496372..130496393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:23683348..23683398, + |
