FFCP PHASE1:Mm9::chr10:127837553..127837593,-: Difference between revisions
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|id=chr10:127837553..127837593,- | |id=chr10:127837553..127837593,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.74e-09,9;CL:0002251,7.74e-09,9;CL:0000239,4.59e-07,6;CL:0000677,4.59e-07,6;CL:0000584,4.59e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.97e-28!59;UBERON:0000160!3.90e-27!43;UBERON:0002108!1.00e-12!16;UBERON:0004119!1.62e-12!130;UBERON:0000925!1.62e-12!130;UBERON:0006595!1.62e-12!130;UBERON:0001007!8.71e-12!128;UBERON:0001555!8.71e-12!128;UBERON:0007026!8.71e-12!128;UBERON:0004921!6.94e-11!126;UBERON:0004185!6.94e-11!126;UBERON:0001045!1.03e-10!13;UBERON:0000344!1.83e-10!15;UBERON:0001264!6.32e-10!12;UBERON:0003922!6.32e-10!12;UBERON:0002114!6.32e-10!12;UBERON:0003923!6.32e-10!12;UBERON:0003924!6.32e-10!12;UBERON:0003921!6.32e-10!12;UBERON:0004923!6.56e-10!24;UBERON:0001242!2.63e-09!13;UBERON:0000060!2.63e-09!13;UBERON:0001262!2.63e-09!13;UBERON:0004786!2.63e-09!13;UBERON:0002075!6.11e-07!19;UBERON:0000485!6.67e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!9.97e-28!59;UBERON:0000160!3.90e-27!43;UBERON:0002108!1.00e-12!16;UBERON:0004119!1.62e-12!130;UBERON:0000925!1.62e-12!130;UBERON:0006595!1.62e-12!130;UBERON:0001007!8.71e-12!128;UBERON:0001555!8.71e-12!128;UBERON:0007026!8.71e-12!128;UBERON:0004921!6.94e-11!126;UBERON:0004185!6.94e-11!126;UBERON:0001045!1.03e-10!13;UBERON:0000344!1.83e-10!15;UBERON:0001264!6.32e-10!12;UBERON:0003922!6.32e-10!12;UBERON:0002114!6.32e-10!12;UBERON:0003923!6.32e-10!12;UBERON:0003924!6.32e-10!12;UBERON:0003921!6.32e-10!12;UBERON:0004923!6.56e-10!24;UBERON:0001242!2.63e-09!13;UBERON:0000060!2.63e-09!13;UBERON:0001262!2.63e-09!13;UBERON:0004786!2.63e-09!13;UBERON:0002075!6.11e-07!19;UBERON:0000485!6.67e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.00e-27,31;UBERON:0005409,7.36e-24,47;UBERON:0000344,6.60e-15,15;UBERON:0001242,3.57e-13,13;UBERON:0001262,3.57e-13,13;UBERON:0004786,3.57e-13,13;UBERON:0001264,5.60e-13,12;UBERON:0004923,8.30e-13,24;UBERON:0003350,7.74e-09,9;UBERON:0004808,7.74e-09,9;UBERON:0001277,7.74e-09,9;UBERON:0004119,9.20e-09,118;UBERON:0000925,9.20e-09,118;UBERON:0006595,9.20e-09,118;UBERON:0000485,2.02e-08,11;UBERON:0002075,4.35e-08,19;UBERON:0001007,5.30e-08,116;UBERON:0001555,5.30e-08,116;UBERON:0007026,5.30e-08,116;UBERON:0004921,4.37e-07,114 | |||
|phase1_expression=1.76163731815273,10.1202868215415,9.09998478779072,10.8887116070459,20.0358291978539,4.02910252588535,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,6.39969691173627,6.8822784320151,4.01962374880514,7.32295393470427,7.54149314400612,26.0332084655232,15.8778981748756,8.86922042621219,0,0,0,1.44425809875637,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.691846491768175,0.301445281105245,0.23517741427141,0,18.2924276123437,0,0,0,0,0,26.0948465705371,0,0,20.6920214718959,0,0,0,0,0.457500602818626,0.376963056338593,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.363553430315,12.9580777665137,0,0,1.03093969057675,4.43703754171354,10.8965241483986,22.0661726290569,13.7613427847908,12.0230236948528,11.0587491872119,13.131127154716,8.77338392036041,9.88701349519644,7.13255564586491,14.5373129475688,0,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.911765658574141,1.51767689098217,1.32849133181642,1.8839847340965,3.45512058981041,0.889357881261447,0.500535317148282,1.37591296579242,0.674586337154561,1.01430060694251,1.68824011826692,5.34714288740982,6.04161888646702,1.45921704097532,2.47105271869273,0,0.744281895337007,0.624075346229121,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,232.303992094935,0.242780636154981,4.83717691143602,56.7701290065253,120.187870402475,138.038381426823,27.6518273689997,12.7236805317127,27.8067955140083,123.88640911084,266.709079694747,268.152412445286,0,0,0.776152102696527,0.857348140126369,0.886701168211368,0.891844088010353,0.164549020602121,0.304464949114599,1.40803024838226,1.27099242518292,0,0,0,0,0.119372344003136,0,9.91034844541493,0,0,1.65109494370578,0.925972636848558,0,0.546776910884101,0,0,0,0,8.59203556213602,0.158167996790568,1.21991680276109,1.72808545314882,1.25452977608681,3.71216358368502,0.674321731924103,0.578574190077352,0,10.628427809927,0,0,0,0,0.972255941720238,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0.308132871494482,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0.512200817262403,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,1.64828045791115,1.28367683836726,0.758091635291392,0.25347929989024,0.188626341386076,1.03005658216871,0.960377286073039,0.631790158511746,1.42888107384922,0.579421629724277,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,0.354951612318675,1.1921809497366,0.872078499793971,0.846984423737976,1.26921911837515,1.46342378298218,1.05227884575137,1.08643291076689,1.12228454331548,0.474540072496697,1.37906275325789,1.22769312950907,1.23949472948773,2.3148793317737,0,1.63752125911786,1.07435527024149,0,0,0.231867835620421 | |phase1_expression=1.76163731815273,10.1202868215415,9.09998478779072,10.8887116070459,20.0358291978539,4.02910252588535,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,6.39969691173627,6.8822784320151,4.01962374880514,7.32295393470427,7.54149314400612,26.0332084655232,15.8778981748756,8.86922042621219,0,0,0,1.44425809875637,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.691846491768175,0.301445281105245,0.23517741427141,0,18.2924276123437,0,0,0,0,0,26.0948465705371,0,0,20.6920214718959,0,0,0,0,0.457500602818626,0.376963056338593,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.363553430315,12.9580777665137,0,0,1.03093969057675,4.43703754171354,10.8965241483986,22.0661726290569,13.7613427847908,12.0230236948528,11.0587491872119,13.131127154716,8.77338392036041,9.88701349519644,7.13255564586491,14.5373129475688,0,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.911765658574141,1.51767689098217,1.32849133181642,1.8839847340965,3.45512058981041,0.889357881261447,0.500535317148282,1.37591296579242,0.674586337154561,1.01430060694251,1.68824011826692,5.34714288740982,6.04161888646702,1.45921704097532,2.47105271869273,0,0.744281895337007,0.624075346229121,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,232.303992094935,0.242780636154981,4.83717691143602,56.7701290065253,120.187870402475,138.038381426823,27.6518273689997,12.7236805317127,27.8067955140083,123.88640911084,266.709079694747,268.152412445286,0,0,0.776152102696527,0.857348140126369,0.886701168211368,0.891844088010353,0.164549020602121,0.304464949114599,1.40803024838226,1.27099242518292,0,0,0,0,0.119372344003136,0,9.91034844541493,0,0,1.65109494370578,0.925972636848558,0,0.546776910884101,0,0,0,0,8.59203556213602,0.158167996790568,1.21991680276109,1.72808545314882,1.25452977608681,3.71216358368502,0.674321731924103,0.578574190077352,0,10.628427809927,0,0,0,0,0.972255941720238,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0.308132871494482,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0.512200817262403,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,1.64828045791115,1.28367683836726,0.758091635291392,0.25347929989024,0.188626341386076,1.03005658216871,0.960377286073039,0.631790158511746,1.42888107384922,0.579421629724277,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,0.354951612318675,1.1921809497366,0.872078499793971,0.846984423737976,1.26921911837515,1.46342378298218,1.05227884575137,1.08643291076689,1.12228454331548,0.474540072496697,1.37906275325789,1.22769312950907,1.23949472948773,2.3148793317737,0,1.63752125911786,1.07435527024149,0,0,0.231867835620421 | ||
|short_description=p3@Slc39a5 | |short_description=p3@Slc39a5 | ||
}} | }} |
Revision as of 15:11, 13 November 2012
Short description: | p3@Slc39a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc39a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | 0bp_to_NM_028092, uc007hmo.2_5end |
EntrezGene: | Slc39a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.74e-09 | 9 |
epithelial cell of alimentary canal | 7.74e-09 | 9 |
brush border epithelial cell | 4.59e-07 | 6 |
gut absorptive cell | 4.59e-07 | 6 |
enterocyte | 4.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.00e-27 | 31 |
gastrointestinal system | 7.36e-24 | 47 |
mucosa | 6.60e-15 | 15 |
intestinal mucosa | 3.57e-13 | 13 |
wall of intestine | 3.57e-13 | 13 |
gastrointestinal system mucosa | 3.57e-13 | 13 |
pancreas | 5.60e-13 | 12 |
organ component layer | 8.30e-13 | 24 |
epithelium of mucosa | 7.74e-09 | 9 |
gastrointestinal system epithelium | 7.74e-09 | 9 |
intestinal epithelium | 7.74e-09 | 9 |
endoderm-derived structure | 9.20e-09 | 118 |
endoderm | 9.20e-09 | 118 |
presumptive endoderm | 9.20e-09 | 118 |
simple columnar epithelium | 2.02e-08 | 11 |
viscus | 4.35e-08 | 19 |
digestive system | 5.30e-08 | 116 |
digestive tract | 5.30e-08 | 116 |
primitive gut | 5.30e-08 | 116 |
subdivision of digestive tract | 4.37e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.