FFCP PHASE1:Mm9::chr12:114660293..114660312,+: Difference between revisions
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|id=chr12:114660293..114660312,+ | |id=chr12:114660293..114660312,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.00e-09!6;CL:0000556!1.00e-09!6;CL:0000988!4.85e-07!32;CL:0002032!4.85e-07!32;CL:0000037!4.85e-07!32;CL:0000566!4.85e-07!32;CL:0000837!4.85e-07!32;CL:0002031!8.39e-07!25 | |ontology_enrichment_celltype=CL:0000553!1.00e-09!6;CL:0000556!1.00e-09!6;CL:0000988!4.85e-07!32;CL:0002032!4.85e-07!32;CL:0000037!4.85e-07!32;CL:0000566!4.85e-07!32;CL:0000837!4.85e-07!32;CL:0002031!8.39e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.56e-38,6;CL:0000556,3.56e-38,6;CL:0000050,2.09e-25,9;CL:0002027,1.11e-19,3;CL:0002006,1.11e-19,3;CL:0002024,1.11e-19,3;CL:0000839,1.59e-17,13;CL:0002031,1.05e-15,25;CL:0000763,3.44e-14,16;CL:0000988,4.16e-12,32;CL:0002032,4.16e-12,32;CL:0000037,4.16e-12,32;CL:0000837,4.16e-12,32;CL:0000049,6.65e-12,19;CL:0002320,3.52e-08,46;CL:0000134,3.52e-08,46;CL:0000945,5.41e-08,1;CL:0000236,5.41e-08,1;CL:0000826,5.41e-08,1;CL:0000219,7.64e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.51e-16!48;UBERON:0002390!1.36e-13!45;UBERON:0003061!1.36e-13!45;UBERON:0002405!4.18e-12!70;UBERON:0004177!3.77e-11!29;UBERON:0003408!5.69e-08!24;UBERON:0001004!1.37e-07!42;UBERON:0002370!4.07e-07!23;UBERON:0000974!4.07e-07!23;UBERON:0004807!4.07e-07!23;UBERON:0005058!4.07e-07!23;UBERON:0003351!4.07e-07!23;UBERON:0009113!4.07e-07!23;UBERON:0003295!4.07e-07!23;UBERON:0009722!4.07e-07!23;UBERON:0005562!4.07e-07!23;UBERON:0007690!4.07e-07!23;UBERON:0005057!5.34e-07!51;UBERON:0000065!6.90e-07!41 | |ontology_enrichment_uberon=UBERON:0002193!1.51e-16!48;UBERON:0002390!1.36e-13!45;UBERON:0003061!1.36e-13!45;UBERON:0002405!4.18e-12!70;UBERON:0004177!3.77e-11!29;UBERON:0003408!5.69e-08!24;UBERON:0001004!1.37e-07!42;UBERON:0002370!4.07e-07!23;UBERON:0000974!4.07e-07!23;UBERON:0004807!4.07e-07!23;UBERON:0005058!4.07e-07!23;UBERON:0003351!4.07e-07!23;UBERON:0009113!4.07e-07!23;UBERON:0003295!4.07e-07!23;UBERON:0009722!4.07e-07!23;UBERON:0005562!4.07e-07!23;UBERON:0007690!4.07e-07!23;UBERON:0005057!5.34e-07!51;UBERON:0000065!6.90e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.97e-15,48;UBERON:0002405,7.97e-15,48;UBERON:0002371,3.44e-14,16;UBERON:0001962,2.61e-13,2;UBERON:0001961,2.61e-13,2;UBERON:0001744,2.61e-13,2;UBERON:0002390,1.39e-10,45;UBERON:0003061,1.39e-10,45;UBERON:0001474,3.09e-10,22;UBERON:0004765,3.09e-10,22;UBERON:0001434,3.09e-10,22;UBERON:0002106,4.42e-10,6;UBERON:0004457,4.42e-10,6;UBERON:0000042,4.42e-10,6;UBERON:0004854,4.42e-10,6;UBERON:0009034,4.42e-10,6;UBERON:0002095,4.42e-10,6;UBERON:0004782,4.42e-10,6;UBERON:0003281,4.42e-10,6;UBERON:0009664,4.42e-10,6;UBERON:0002296,4.42e-10,6;UBERON:0005602,4.42e-10,6;UBERON:0001179,4.42e-10,6;UBERON:0006293,4.42e-10,6;UBERON:0002465,3.51e-09,3;UBERON:0002384,3.52e-08,46;UBERON:0003199,2.37e-07,1;UBERON:0002204,6.35e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,4.33042690360362,3.64455481301687,2.09868563438444,4.88966356305268,7.26706498110415,2.54633791078818,0.0850432901510698,0.893618560807968,0.261199789138935,2.3998863419011,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0,0,0.662524555381181,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.370850604021019,10.0813819670733,0,0.185194527369712,0.753473828018764,1.0935538217682,2.28778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.457240839929999,0.302478555410522,0.38983152295901,0.769694733122636,0.467507608726276,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,4.33042690360362,3.64455481301687,2.09868563438444,4.88966356305268,7.26706498110415,2.54633791078818,0.0850432901510698,0.893618560807968,0.261199789138935,2.3998863419011,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0,0,0.662524555381181,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.370850604021019,10.0813819670733,0,0.185194527369712,0.753473828018764,1.0935538217682,2.28778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.457240839929999,0.302478555410522,0.38983152295901,0.769694733122636,0.467507608726276,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:114660293..114660312,+ | |short_description=p@chr12:114660293..114660312,+ | ||
}} | }} |
Revision as of 04:25, 15 November 2012
Short description: | p@chr12:114660293..114660312, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660293..114660312, + |
Coexpression cluster: | MCL_coexpression_mm9:2029 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.56e-38 | 6 |
megakaryocyte | 3.56e-38 | 6 |
megakaryocyte-erythroid progenitor cell | 2.09e-25 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.11e-19 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.11e-19 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.11e-19 | 3 |
myeloid lineage restricted progenitor cell | 1.59e-17 | 13 |
hematopoietic lineage restricted progenitor cell | 1.05e-15 | 25 |
myeloid cell | 3.44e-14 | 16 |
hematopoietic cell | 4.16e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.16e-12 | 32 |
hematopoietic stem cell | 4.16e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.16e-12 | 32 |
common myeloid progenitor | 6.65e-12 | 19 |
connective tissue cell | 3.52e-08 | 46 |
mesenchymal cell | 3.52e-08 | 46 |
lymphocyte of B lineage | 5.41e-08 | 1 |
B cell | 5.41e-08 | 1 |
pro-B cell | 5.41e-08 | 1 |
motile cell | 7.64e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.97e-15 | 48 |
immune system | 7.97e-15 | 48 |
bone marrow | 3.44e-14 | 16 |
gut-associated lymphoid tissue | 2.61e-13 | 2 |
mucosa-associated lymphoid tissue | 2.61e-13 | 2 |
lymphoid tissue | 2.61e-13 | 2 |
hematopoietic system | 1.39e-10 | 45 |
blood island | 1.39e-10 | 45 |
bone element | 3.09e-10 | 22 |
skeletal element | 3.09e-10 | 22 |
skeletal system | 3.09e-10 | 22 |
spleen | 4.42e-10 | 6 |
cavity lining | 4.42e-10 | 6 |
serous membrane | 4.42e-10 | 6 |
gastrointestinal system mesentery | 4.42e-10 | 6 |
stomach region | 4.42e-10 | 6 |
mesentery | 4.42e-10 | 6 |
gastrointestinal system serosa | 4.42e-10 | 6 |
mesentery of stomach | 4.42e-10 | 6 |
gut mesentery | 4.42e-10 | 6 |
dorsal mesentery | 4.42e-10 | 6 |
dorsal mesogastrium | 4.42e-10 | 6 |
peritoneal cavity | 4.42e-10 | 6 |
spleen primordium | 4.42e-10 | 6 |
lymphoid system | 3.51e-09 | 3 |
connective tissue | 3.52e-08 | 46 |
egg chamber | 2.37e-07 | 1 |
musculoskeletal system | 6.35e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.