FFCP PHASE1:Mm9::chr7:117792331..117792347,-: Difference between revisions
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|id=chr7:117792331..117792347,- | |id=chr7:117792331..117792347,- | ||
|ontology_enrichment_celltype=CL:0002563!2.38e-08!9;CL:0002251!2.38e-08!9;CL:0000066!6.49e-07!25 | |ontology_enrichment_celltype=CL:0002563!2.38e-08!9;CL:0002251!2.38e-08!9;CL:0000066!6.49e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.26e-12,9;CL:0002251,5.26e-12,9;CL:0000066,1.28e-10,25;CL:0000223,6.48e-09,20;CL:0000239,1.77e-08,6;CL:0000677,1.77e-08,6;CL:0000584,1.77e-08,6;CL:0000075,4.11e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.89e-31!59;UBERON:0000160!5.96e-30!43;UBERON:0001007!1.17e-18!128;UBERON:0001555!1.17e-18!128;UBERON:0007026!1.17e-18!128;UBERON:0004119!5.83e-18!130;UBERON:0000925!5.83e-18!130;UBERON:0006595!5.83e-18!130;UBERON:0004921!1.75e-17!126;UBERON:0004185!1.75e-17!126;UBERON:0002108!8.40e-13!16;UBERON:0000344!1.11e-12!15;UBERON:0001242!1.84e-11!13;UBERON:0000060!1.84e-11!13;UBERON:0001262!1.84e-11!13;UBERON:0004786!1.84e-11!13;UBERON:0001045!3.11e-10!13;UBERON:0001264!8.52e-10!12;UBERON:0003922!8.52e-10!12;UBERON:0002114!8.52e-10!12;UBERON:0003923!8.52e-10!12;UBERON:0003924!8.52e-10!12;UBERON:0003921!8.52e-10!12;UBERON:0003350!2.38e-08!9;UBERON:0004808!2.38e-08!9;UBERON:0001277!2.38e-08!9;UBERON:0004923!2.17e-07!24 | |ontology_enrichment_uberon=UBERON:0005409!6.89e-31!59;UBERON:0000160!5.96e-30!43;UBERON:0001007!1.17e-18!128;UBERON:0001555!1.17e-18!128;UBERON:0007026!1.17e-18!128;UBERON:0004119!5.83e-18!130;UBERON:0000925!5.83e-18!130;UBERON:0006595!5.83e-18!130;UBERON:0004921!1.75e-17!126;UBERON:0004185!1.75e-17!126;UBERON:0002108!8.40e-13!16;UBERON:0000344!1.11e-12!15;UBERON:0001242!1.84e-11!13;UBERON:0000060!1.84e-11!13;UBERON:0001262!1.84e-11!13;UBERON:0004786!1.84e-11!13;UBERON:0001045!3.11e-10!13;UBERON:0001264!8.52e-10!12;UBERON:0003922!8.52e-10!12;UBERON:0002114!8.52e-10!12;UBERON:0003923!8.52e-10!12;UBERON:0003924!8.52e-10!12;UBERON:0003921!8.52e-10!12;UBERON:0003350!2.38e-08!9;UBERON:0004808!2.38e-08!9;UBERON:0001277!2.38e-08!9;UBERON:0004923!2.17e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.49e-28,47;UBERON:0000160,1.15e-27,31;UBERON:0000344,1.15e-18,15;UBERON:0001007,1.20e-17,116;UBERON:0001555,1.20e-17,116;UBERON:0007026,1.20e-17,116;UBERON:0004119,4.13e-17,118;UBERON:0000925,4.13e-17,118;UBERON:0006595,4.13e-17,118;UBERON:0001242,8.65e-17,13;UBERON:0001262,8.65e-17,13;UBERON:0004786,8.65e-17,13;UBERON:0004921,3.48e-16,114;UBERON:0003350,5.26e-12,9;UBERON:0004808,5.26e-12,9;UBERON:0001277,5.26e-12,9;UBERON:0004923,2.92e-11,24;UBERON:0001264,6.48e-11,12;UBERON:0000485,2.08e-09,11;UBERON:0009854,7.51e-07,23;UBERON:0009856,7.51e-07,23 | |||
|phase1_expression=0,3.83872948403297,2.72999543633722,3.93203474698879,4.50806156951712,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.35984087866154,2.52350209173887,7.46501553349526,2.15380998079537,5.17130958446134,3.6104449696711,3.52842181663903,3.99114919179548,0,0,0,5.19932915552294,3.98963148860382,3.47087905646027,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,4.75979933595425,2.15881276655127,1.94932925234301,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,1.48316980640624,1.3013942122792,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.27795687669216,2.90895623329899,0,0.696710015581316,1.41754207454303,2.01683524623343,1.55664630691409,0.951128130562796,2.84717436926707,4.11747386810027,3.01602250560323,3.18330355265841,3.50935356814416,3.59527763461689,2.37751854862164,5.17767310461355,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.701358198903186,2.15004226222475,2.21415221969403,3.767969468193,5.30607804863742,2.96452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,1.94562272130042,1.92192989231657,2.87536413054709,1.86070473834252,0.624075346229121,2.02063102357689,3.04975602987251,4.3419916922703,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0.345369963731791,1.88043776155965,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.494910368917606,3.98235415019888,0.242780636154981,0.906970670894253,4.52652191414155,2.95301892880773,5.84126781093462,8.26970538138308,5.45300594216258,5.34746067577082,4.74055136903724,1.05418608574999,5.15677716240934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0.188368457004691,0,0,0,0,0,3.81868247206045,0,0.813277868507395,1.83609079397062,3.76358932826044,2.18362563746178,5.39457385539283,5.45512807787217,2.09404753587224,3.24037433229482,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.441596760403192,0,0.70990322463735,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.701794825336225,0.644613162144895,0,0,0 | |phase1_expression=0,3.83872948403297,2.72999543633722,3.93203474698879,4.50806156951712,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.35984087866154,2.52350209173887,7.46501553349526,2.15380998079537,5.17130958446134,3.6104449696711,3.52842181663903,3.99114919179548,0,0,0,5.19932915552294,3.98963148860382,3.47087905646027,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,4.75979933595425,2.15881276655127,1.94932925234301,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,1.48316980640624,1.3013942122792,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.27795687669216,2.90895623329899,0,0.696710015581316,1.41754207454303,2.01683524623343,1.55664630691409,0.951128130562796,2.84717436926707,4.11747386810027,3.01602250560323,3.18330355265841,3.50935356814416,3.59527763461689,2.37751854862164,5.17767310461355,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.701358198903186,2.15004226222475,2.21415221969403,3.767969468193,5.30607804863742,2.96452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,1.94562272130042,1.92192989231657,2.87536413054709,1.86070473834252,0.624075346229121,2.02063102357689,3.04975602987251,4.3419916922703,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0.345369963731791,1.88043776155965,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.494910368917606,3.98235415019888,0.242780636154981,0.906970670894253,4.52652191414155,2.95301892880773,5.84126781093462,8.26970538138308,5.45300594216258,5.34746067577082,4.74055136903724,1.05418608574999,5.15677716240934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0.188368457004691,0,0,0,0,0,3.81868247206045,0,0.813277868507395,1.83609079397062,3.76358932826044,2.18362563746178,5.39457385539283,5.45512807787217,2.09404753587224,3.24037433229482,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.441596760403192,0,0.70990322463735,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.701794825336225,0.644613162144895,0,0,0 | ||
|short_description=p@chr7:117792331..117792347,- | |short_description=p@chr7:117792331..117792347,- | ||
}} | }} |
Revision as of 05:22, 15 November 2012
Short description: | p@chr7:117792331..117792347, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:117792331..117792347, - |
Coexpression cluster: | MCL_coexpression_mm9:3072 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.26e-12 | 9 |
epithelial cell of alimentary canal | 5.26e-12 | 9 |
epithelial cell | 1.28e-10 | 25 |
endodermal cell | 6.48e-09 | 20 |
brush border epithelial cell | 1.77e-08 | 6 |
gut absorptive cell | 1.77e-08 | 6 |
enterocyte | 1.77e-08 | 6 |
columnar/cuboidal epithelial cell | 4.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.49e-28 | 47 |
intestine | 1.15e-27 | 31 |
mucosa | 1.15e-18 | 15 |
digestive system | 1.20e-17 | 116 |
digestive tract | 1.20e-17 | 116 |
primitive gut | 1.20e-17 | 116 |
endoderm-derived structure | 4.13e-17 | 118 |
endoderm | 4.13e-17 | 118 |
presumptive endoderm | 4.13e-17 | 118 |
intestinal mucosa | 8.65e-17 | 13 |
wall of intestine | 8.65e-17 | 13 |
gastrointestinal system mucosa | 8.65e-17 | 13 |
subdivision of digestive tract | 3.48e-16 | 114 |
epithelium of mucosa | 5.26e-12 | 9 |
gastrointestinal system epithelium | 5.26e-12 | 9 |
intestinal epithelium | 5.26e-12 | 9 |
organ component layer | 2.92e-11 | 24 |
pancreas | 6.48e-11 | 12 |
simple columnar epithelium | 2.08e-09 | 11 |
digestive tract diverticulum | 7.51e-07 | 23 |
sac | 7.51e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.