FFCP PHASE1:Hg19::chr17:7154791..7154820,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.74e-13!180;CL:0000192!1.11e-09!42;CL:0000514!1.11e-09!42;CL:0000680!1.16e-09!57;CL:0000056!1.16e-09!57;CL:0000355!1.16e-09!57;CL:0000183!2.52e-09!59;CL:0000222!2.54e-09!119;CL:0000359!3.71e-09!32;CL:0000187!3.88e-09!54;CL:0000393!5.81e-08!60;CL:0000211!5.81e-08!60 | |ontology_enrichment_celltype=CL:0000055!6.74e-13!180;CL:0000192!1.11e-09!42;CL:0000514!1.11e-09!42;CL:0000680!1.16e-09!57;CL:0000056!1.16e-09!57;CL:0000355!1.16e-09!57;CL:0000183!2.52e-09!59;CL:0000222!2.54e-09!119;CL:0000359!3.71e-09!32;CL:0000187!3.88e-09!54;CL:0000393!5.81e-08!60;CL:0000211!5.81e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.43e-09;32!CL:0000192;3.47e-08;43 | |ontology_enrichment_celltype_v019=CL:0000359;1.43e-09;32!CL:0000192;3.47e-08;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.43e-11,43;CL:0000514,9.43e-11,43;CL:0000680,1.16e-10,58;CL:0000056,1.16e-10,58;CL:0000355,1.16e-10,58;CL:0000359,1.17e-10,32;CL:0000187,2.74e-10,55;CL:0000393,5.37e-09,61;CL:0000211,5.37e-09,61;CL:0000222,3.80e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;3.47e-08;43 | |ontology_enrichment_development_v019=CL:0000514;3.47e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.70e-11!70;UBERON:0000486!1.04e-10!82;UBERON:0000468!1.39e-10!659;UBERON:0000914!1.51e-10!83;UBERON:0002329!1.51e-10!83;UBERON:0003077!1.51e-10!83;UBERON:0003059!1.51e-10!83;UBERON:0007282!1.51e-10!83;UBERON:0009618!1.51e-10!83;UBERON:0007285!1.51e-10!83;UBERON:0000480!2.64e-10!626;UBERON:0000467!2.79e-10!625;UBERON:0001134!1.36e-09!61;UBERON:0002036!1.36e-09!61;UBERON:0003082!1.36e-09!61;UBERON:0001637!2.19e-09!42;UBERON:0003509!2.19e-09!42;UBERON:0004572!2.19e-09!42;UBERON:0002049!2.85e-09!79;UBERON:0007798!2.85e-09!79;UBERON:0002385!3.92e-09!63;UBERON:0001015!3.92e-09!63;UBERON:0000383!3.92e-09!63;UBERON:0000055!6.69e-09!69;UBERON:0000923!2.48e-08!604;UBERON:0005291!2.48e-08!604;UBERON:0006598!2.48e-08!604;UBERON:0002532!2.48e-08!604;UBERON:0002050!2.85e-08!605;UBERON:0005423!2.85e-08!605;UBERON:0001981!5.36e-08!60;UBERON:0007500!5.36e-08!60;UBERON:0004537!5.36e-08!60;UBERON:0006965!5.36e-08!60;UBERON:0000926!8.14e-08!448;UBERON:0004120!8.14e-08!448;UBERON:0006603!8.14e-08!448;UBERON:0004535!8.90e-08!110;UBERON:0004573!1.27e-07!33;UBERON:0004571!1.27e-07!33;UBERON:0000922!2.57e-07!612;UBERON:0004872!3.25e-07!84;UBERON:0001009!4.03e-07!113 | |ontology_enrichment_uberon=UBERON:0004290!2.70e-11!70;UBERON:0000486!1.04e-10!82;UBERON:0000468!1.39e-10!659;UBERON:0000914!1.51e-10!83;UBERON:0002329!1.51e-10!83;UBERON:0003077!1.51e-10!83;UBERON:0003059!1.51e-10!83;UBERON:0007282!1.51e-10!83;UBERON:0009618!1.51e-10!83;UBERON:0007285!1.51e-10!83;UBERON:0000480!2.64e-10!626;UBERON:0000467!2.79e-10!625;UBERON:0001134!1.36e-09!61;UBERON:0002036!1.36e-09!61;UBERON:0003082!1.36e-09!61;UBERON:0001637!2.19e-09!42;UBERON:0003509!2.19e-09!42;UBERON:0004572!2.19e-09!42;UBERON:0002049!2.85e-09!79;UBERON:0007798!2.85e-09!79;UBERON:0002385!3.92e-09!63;UBERON:0001015!3.92e-09!63;UBERON:0000383!3.92e-09!63;UBERON:0000055!6.69e-09!69;UBERON:0000923!2.48e-08!604;UBERON:0005291!2.48e-08!604;UBERON:0006598!2.48e-08!604;UBERON:0002532!2.48e-08!604;UBERON:0002050!2.85e-08!605;UBERON:0005423!2.85e-08!605;UBERON:0001981!5.36e-08!60;UBERON:0007500!5.36e-08!60;UBERON:0004537!5.36e-08!60;UBERON:0006965!5.36e-08!60;UBERON:0000926!8.14e-08!448;UBERON:0004120!8.14e-08!448;UBERON:0006603!8.14e-08!448;UBERON:0004535!8.90e-08!110;UBERON:0004573!1.27e-07!33;UBERON:0004571!1.27e-07!33;UBERON:0000922!2.57e-07!612;UBERON:0004872!3.25e-07!84;UBERON:0001009!4.03e-07!113 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@CTDNEP1 | |short_description=p3@CTDNEP1 | ||
}} | }} |
Revision as of 18:56, 17 November 2012
Short description: | p3@CTDNEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CTDNEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_NM_001143775, uc002gfc.2, uc002gfd.2_5end |
EntrezGene: | CTDNEP1 |
HGNC: | 19085 |
UniProt: | O95476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.43e-11 | 43 |
smooth muscle myoblast | 9.43e-11 | 43 |
muscle precursor cell | 1.16e-10 | 58 |
myoblast | 1.16e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-10 | 58 |
vascular associated smooth muscle cell | 1.17e-10 | 32 |
muscle cell | 2.74e-10 | 55 |
electrically responsive cell | 5.37e-09 | 61 |
electrically active cell | 5.37e-09 | 61 |
mesodermal cell | 3.80e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.43e-13 | 73 |
paraxial mesoderm | 4.33e-13 | 72 |
presumptive paraxial mesoderm | 4.33e-13 | 72 |
somite | 1.05e-12 | 71 |
presomitic mesoderm | 1.05e-12 | 71 |
presumptive segmental plate | 1.05e-12 | 71 |
dermomyotome | 1.05e-12 | 71 |
trunk paraxial mesoderm | 1.05e-12 | 71 |
epithelial vesicle | 5.90e-12 | 78 |
multilaminar epithelium | 7.86e-11 | 83 |
skeletal muscle tissue | 9.25e-11 | 62 |
striated muscle tissue | 9.25e-11 | 62 |
myotome | 9.25e-11 | 62 |
muscle tissue | 4.82e-10 | 64 |
musculature | 4.82e-10 | 64 |
musculature of body | 4.82e-10 | 64 |
artery | 6.01e-10 | 42 |
arterial blood vessel | 6.01e-10 | 42 |
arterial system | 6.01e-10 | 42 |
mesoderm | 4.92e-09 | 315 |
mesoderm-derived structure | 4.92e-09 | 315 |
presumptive mesoderm | 4.92e-09 | 315 |
vessel | 2.00e-08 | 68 |
epithelial tube open at both ends | 2.79e-08 | 59 |
blood vessel | 2.79e-08 | 59 |
blood vasculature | 2.79e-08 | 59 |
vascular cord | 2.79e-08 | 59 |
systemic artery | 3.63e-08 | 33 |
systemic arterial system | 3.63e-08 | 33 |
vasculature | 6.10e-08 | 78 |
vascular system | 6.10e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.80e-07 | 83 |
cardiovascular system | 2.60e-07 | 109 |
circulatory system | 9.31e-07 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.