FFCP PHASE1:Hg19::chr11:74857404..74857406,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002563!1.20e-09!4;CL:0002253!5.30e-09!2 | |ontology_enrichment_celltype=CL:0002563!1.20e-09!4;CL:0002253!5.30e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002563;8.69e-18;4!CL:0000333;1.83e-14;5 | |ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002563;8.69e-18;4!CL:0000333;1.83e-14;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.04e-34,2;CL:0002563,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!3.07e-21!239;DOID:162!1.21e-20!235;DOID:0050687!1.63e-13!143;DOID:3119!2.11e-12!14;DOID:0050686!1.26e-11!137;DOID:305!4.23e-09!106;DOID:154!8.75e-09!2;DOID:4236!8.75e-09!2;DOID:1036!1.31e-07!8 | |ontology_enrichment_disease=DOID:14566!3.07e-21!239;DOID:162!1.21e-20!235;DOID:0050687!1.63e-13!143;DOID:3119!2.11e-12!14;DOID:0050686!1.26e-11!137;DOID:305!4.23e-09!106;DOID:154!8.75e-09!2;DOID:4236!8.75e-09!2;DOID:1036!1.31e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:169;2.74e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.56e-08;10 | |ontology_enrichment_disease_v019=DOID:169;2.74e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.56e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.74e-12,6;DOID:1036,1.24e-09,8;DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0001052!1.42e-09!4;UBERON:0000344!4.44e-08!12;UBERON:0003350!8.64e-08!5;UBERON:0004907!9.90e-08!5;UBERON:0003929!2.00e-07!54;UBERON:0000013!2.15e-07!5;UBERON:0002410!2.15e-07!5;UBERON:0000010!8.73e-07!8;UBERON:0001046!9.86e-07!19 | |ontology_enrichment_uberon=UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0001052!1.42e-09!4;UBERON:0000344!4.44e-08!12;UBERON:0003350!8.64e-08!5;UBERON:0004907!9.90e-08!5;UBERON:0003929!2.00e-07!54;UBERON:0000013!2.15e-07!5;UBERON:0002410!2.15e-07!5;UBERON:0000010!8.73e-07!8;UBERON:0001046!9.86e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004907;1.60e-14;5!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000010;1.21e-08;8!UBERON:0000059;2.47e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004907;1.60e-14;5!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000010;1.21e-08;8!UBERON:0000059;2.47e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.69e-18,4;UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0003350,1.35e-09,8;UBERON:0001155,1.12e-08,9;UBERON:0000485,1.12e-08,9;UBERON:0000010,1.21e-08,8;UBERON:0000059,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,3.60532092175952,0.158936578980379,0,0,2.26164914294305,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,1.72992536041486,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,3.60532092175952,0.158936578980379,0,0,2.26164914294305,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,1.72992536041486,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:74857404..74857406,- | |short_description=p@chr11:74857404..74857406,- | ||
}} | }} |
Revision as of 22:48, 17 November 2012
Short description: | p@chr11:74857404..74857406, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:74857404..74857406, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.04e-34 | 2 |
intestinal epithelial cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.69e-18 | 4 |
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
epithelium of mucosa | 1.35e-09 | 8 |
colon | 1.12e-08 | 9 |
simple columnar epithelium | 1.12e-08 | 9 |
peripheral nervous system | 1.21e-08 | 8 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.74e-12 | 6 |
chronic leukemia | 1.24e-09 | 8 |
neuroectodermal tumor | 6.56e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.