FFCP PHASE1:Hg19::chr20:10400359..10400384,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.73e-44!254;CL:0000223!2.54e-25!59;CL:0002076!1.34e-23!43;CL:0002368!2.07e-12!13;CL:0000076!2.13e-12!62;CL:0002251!3.55e-12!21;CL:0002159!1.33e-11!13;CL:0000063!5.75e-08!578;CL:0000240!2.48e-07!6;CL:0000311!2.48e-07!6;CL:0000079!2.48e-07!6;CL:0000237!2.48e-07!6;CL:0000036!2.48e-07!6;CL:0000357!2.48e-07!6;CL:0000114!2.48e-07!6;CL:0000244!3.22e-07!4;CL:0000083!3.22e-07!4;CL:0000731!3.22e-07!4;CL:0002202!5.83e-07!9;CL:0002632!5.83e-07!9;CL:0000220!6.41e-07!246;CL:0002321!9.28e-07!248 | |ontology_enrichment_celltype=CL:0000066!4.73e-44!254;CL:0000223!2.54e-25!59;CL:0002076!1.34e-23!43;CL:0002368!2.07e-12!13;CL:0000076!2.13e-12!62;CL:0002251!3.55e-12!21;CL:0002159!1.33e-11!13;CL:0000063!5.75e-08!578;CL:0000240!2.48e-07!6;CL:0000311!2.48e-07!6;CL:0000079!2.48e-07!6;CL:0000237!2.48e-07!6;CL:0000036!2.48e-07!6;CL:0000357!2.48e-07!6;CL:0000114!2.48e-07!6;CL:0000244!3.22e-07!4;CL:0000083!3.22e-07!4;CL:0000731!3.22e-07!4;CL:0002202!5.83e-07!9;CL:0002632!5.83e-07!9;CL:0000220!6.41e-07!246;CL:0002321!9.28e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.63e-22;42!CL:0002368;3.81e-21;13!CL:0002159;8.24e-15;14!CL:0002202;1.33e-11;9!CL:0002632;1.33e-11;9!CL:0002251;5.62e-10;20!CL:0000307;8.20e-10;3!CL:0002166;4.53e-09;3!CL:0000240;4.00e-08;6!CL:0000311;4.00e-08;6!CL:0000079;4.00e-08;6!CL:0000237;4.00e-08;6!CL:0000083;3.89e-07;4!CL:0000244;4.15e-07;4!CL:0000731;4.15e-07;4!CL:0000076;5.56e-07;63!CL:0000082;6.50e-07;19!CL:0002077;6.84e-07;34 | |ontology_enrichment_celltype_v019=CL:0002076;6.63e-22;42!CL:0002368;3.81e-21;13!CL:0002159;8.24e-15;14!CL:0002202;1.33e-11;9!CL:0002632;1.33e-11;9!CL:0002251;5.62e-10;20!CL:0000307;8.20e-10;3!CL:0002166;4.53e-09;3!CL:0000240;4.00e-08;6!CL:0000311;4.00e-08;6!CL:0000079;4.00e-08;6!CL:0000237;4.00e-08;6!CL:0000083;3.89e-07;4!CL:0000244;4.15e-07;4!CL:0000731;4.15e-07;4!CL:0000076;5.56e-07;63!CL:0000082;6.50e-07;19!CL:0002077;6.84e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-30,253;CL:0002076,1.12e-27,42;CL:0000223,1.14e-24,58;CL:0002368,5.14e-21,13;CL:0000076,6.49e-15,63;CL:0002159,7.05e-15,14;CL:0002202,1.46e-11,9;CL:0002632,1.46e-11,9;CL:0002251,4.86e-10,20;CL:0000068,1.01e-09,3;CL:0000069,1.01e-09,3;CL:0000307,1.01e-09,3;CL:0000377,1.01e-09,3;CL:0002166,3.72e-09,3;CL:0000240,3.85e-08,6;CL:0000311,3.85e-08,6;CL:0000079,3.85e-08,6;CL:0000237,3.85e-08,6;CL:0000036,3.85e-08,6;CL:0000357,3.85e-08,6;CL:0000114,3.85e-08,6;CL:0002077,6.23e-08,34;CL:0000083,3.01e-07,4;CL:0000244,4.42e-07,4;CL:0000731,4.42e-07,4;CL:0002321,6.14e-07,250;CL:0000082,6.16e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;5.77e-14;58!CL:0000377;8.20e-10;3!CL:0000357;4.00e-08;6!CL:0000114;4.00e-08;6 | |ontology_enrichment_development_v019=CL:0000223;5.77e-14;58!CL:0000377;8.20e-10;3!CL:0000357;4.00e-08;6!CL:0000114;4.00e-08;6 | ||
|ontology_enrichment_disease=DOID:305!8.97e-27!106;DOID:0050687!1.31e-19!143;DOID:1749!9.18e-17!14;DOID:162!7.75e-12!235;DOID:14566!3.04e-11!239;DOID:170!1.79e-09!6;DOID:1793!3.22e-07!4 | |ontology_enrichment_disease=DOID:305!8.97e-27!106;DOID:0050687!1.31e-19!143;DOID:1749!9.18e-17!14;DOID:162!7.75e-12!235;DOID:14566!3.04e-11!239;DOID:170!1.79e-09!6;DOID:1793!3.22e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.13e-28;14!DOID:170;9.04e-08;6!DOID:4074;3.88e-07;2!DOID:4905;3.88e-07;2!DOID:3498;3.88e-07;2!DOID:1793;3.89e-07;4 | |ontology_enrichment_disease_v019=DOID:1749;3.13e-28;14!DOID:170;9.04e-08;6!DOID:4074;3.88e-07;2!DOID:4905;3.88e-07;2!DOID:3498;3.88e-07;2!DOID:1793;3.89e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.71e-28,14;DOID:305,1.83e-15,106;DOID:0050687,2.02e-11,143;DOID:170,7.82e-08,6;DOID:1793,3.01e-07,4;DOID:4074,3.44e-07,2;DOID:4905,3.44e-07,2;DOID:3498,3.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.70e-20!169;UBERON:0000925!2.70e-20!169;UBERON:0006595!2.70e-20!169;UBERON:0001007!3.08e-13!155;UBERON:0001555!3.08e-13!155;UBERON:0007026!3.08e-13!155;UBERON:0005911!3.31e-13!82;UBERON:0001264!2.42e-10!10;UBERON:0003922!2.42e-10!10;UBERON:0003923!2.42e-10!10;UBERON:0003924!2.42e-10!10;UBERON:0003921!2.42e-10!10;UBERON:0000077!5.31e-10!130;UBERON:0005910!1.05e-09!6;UBERON:0002114!1.94e-09!12;UBERON:0001045!3.09e-09!11;UBERON:0002075!3.31e-09!18;UBERON:0003729!3.58e-09!5;UBERON:0004921!1.22e-08!129;UBERON:0004185!1.22e-08!129;UBERON:0000365!1.40e-08!5;UBERON:0005177!2.25e-08!107;UBERON:0000466!3.12e-08!126;UBERON:0001041!4.35e-08!98;UBERON:0000344!4.63e-08!12;UBERON:0002108!6.74e-08!14;UBERON:0003343!1.56e-07!4;UBERON:0004785!1.56e-07!4;UBERON:0000949!6.46e-07!45;UBERON:0001048!9.28e-07!168;UBERON:0000464!9.75e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!2.70e-20!169;UBERON:0000925!2.70e-20!169;UBERON:0006595!2.70e-20!169;UBERON:0001007!3.08e-13!155;UBERON:0001555!3.08e-13!155;UBERON:0007026!3.08e-13!155;UBERON:0005911!3.31e-13!82;UBERON:0001264!2.42e-10!10;UBERON:0003922!2.42e-10!10;UBERON:0003923!2.42e-10!10;UBERON:0003924!2.42e-10!10;UBERON:0003921!2.42e-10!10;UBERON:0000077!5.31e-10!130;UBERON:0005910!1.05e-09!6;UBERON:0002114!1.94e-09!12;UBERON:0001045!3.09e-09!11;UBERON:0002075!3.31e-09!18;UBERON:0003729!3.58e-09!5;UBERON:0004921!1.22e-08!129;UBERON:0004185!1.22e-08!129;UBERON:0000365!1.40e-08!5;UBERON:0005177!2.25e-08!107;UBERON:0000466!3.12e-08!126;UBERON:0001041!4.35e-08!98;UBERON:0000344!4.63e-08!12;UBERON:0002108!6.74e-08!14;UBERON:0003343!1.56e-07!4;UBERON:0004785!1.56e-07!4;UBERON:0000949!6.46e-07!45;UBERON:0001048!9.28e-07!168;UBERON:0000464!9.75e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.15e-13;10!UBERON:0003343;1.19e-11;4!UBERON:0004785;1.19e-11;4!UBERON:0000344;6.62e-10;20!UBERON:0003729;7.90e-10;13!UBERON:0005911;1.04e-09;36!UBERON:0004807;2.57e-09;22!UBERON:0000365;2.71e-09;5!UBERON:0002075;4.36e-09;18!UBERON:0000486;8.09e-08;12!UBERON:0000974;8.96e-08;6!UBERON:0005910;9.55e-08;6!UBERON:0005181;2.05e-07;35!UBERON:0005178;4.16e-07;34!UBERON:0002224;4.16e-07;34!UBERON:0004802;6.50e-07;19!UBERON:0000115;6.50e-07;19!UBERON:0001708;6.73e-07;4!UBERON:0008895;6.73e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001264;1.15e-13;10!UBERON:0003343;1.19e-11;4!UBERON:0004785;1.19e-11;4!UBERON:0000344;6.62e-10;20!UBERON:0003729;7.90e-10;13!UBERON:0005911;1.04e-09;36!UBERON:0004807;2.57e-09;22!UBERON:0000365;2.71e-09;5!UBERON:0002075;4.36e-09;18!UBERON:0000486;8.09e-08;12!UBERON:0000974;8.96e-08;6!UBERON:0005910;9.55e-08;6!UBERON:0005181;2.05e-07;35!UBERON:0005178;4.16e-07;34!UBERON:0002224;4.16e-07;34!UBERON:0004802;6.50e-07;19!UBERON:0000115;6.50e-07;19!UBERON:0001708;6.73e-07;4!UBERON:0008895;6.73e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.10e-14,10;UBERON:0004119,5.57e-12,160;UBERON:0000925,5.57e-12,160;UBERON:0006595,5.57e-12,160;UBERON:0003343,8.37e-12,4;UBERON:0004785,8.37e-12,4;UBERON:0001004,1.01e-10,74;UBERON:0000344,5.59e-10,20;UBERON:0003729,6.95e-10,13;UBERON:0000365,2.54e-09,5;UBERON:0002075,3.54e-09,18;UBERON:0005153,4.65e-09,37;UBERON:0005157,5.23e-09,47;UBERON:0000065,8.64e-09,54;UBERON:0005177,2.15e-08,101;UBERON:0005178,2.30e-08,34;UBERON:0002224,2.30e-08,34;UBERON:0005181,4.65e-08,35;UBERON:0005911,5.56e-08,82;UBERON:0005910,9.05e-08,6;UBERON:0001007,1.45e-07,145;UBERON:0001555,1.45e-07,145;UBERON:0007026,1.45e-07,145;UBERON:0004807,5.81e-07,28;UBERON:0001708,5.82e-07,4;UBERON:0008895,5.82e-07,4;UBERON:0004802,6.16e-07,19;UBERON:0000115,6.16e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0,13.6808983761711,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,1.75600456653801,8.99214026060957,3.01586917234893,7.03672183204825,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,2.81201501960331,2.68771405118175,2.69372684760534,28.0318176059915,5.23141089325132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,9.11601790465374,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.325378394664303,0,0,0,6.3169209179579,0,0,0,0,0.15350367472613,0,0,0,0,0,29.5859998496151,4.99694175149276,1.14851441245126,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,18.2822014178473,2.01090682660736,4.3556393944529,0,3.01353760869861,3.36942951335251,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,4.04407580162971,5.9076987642951,0,0,0,0,0,0,0,0,0,0,1.137934482855,3.0510438035132,0,0,0,0,0,0,0,0,0,0,1.52513848926586,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,3.52196314077761,9.46843480182962,0,0,0,0,4.35937916302028,0.103688191397247,3.32326936353593,1.323967823502,12.557316736289,10.7525186795663,1.13843818411917,0,0,3.23374911467446,1.39294730528644,0,0,0,0.438535902517113,0.0821154570532092,0,0,0,2.60379656828827,0.19871461170299,0,0,0.881747022766871,0.213452994739353,0,0.576361668616424,0,0,5.76219191952599,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,11.1310814445278,0,0,0,0,0,0,0,0.164185041498678,0,0,0,1.32506888912221,0,0,4.10608410922391,0,0,0,0,0,0,0,12.1284838976335,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,1.15571898244382,0.214441591374926,2.3489486276869,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,5.4941152073243,0,0,0,0,0,7.41361390913056,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,6.28145398406564,2.47736419030255,2.93485757634686,1.96393632455575,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0.887136517302272,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0,1.41832609060762,0.111231401892069,0,0,2.24217730651031,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.62041277132864,0,0,13.1521313044426,0.365753774946808,0,0,0,0,0,0,0,0,0,2.8682940277668,0,0,4.23285566725371,0,2.59244201811789,0,0,0,0,0,0,0,14.9985308428752,18.7034282009317,78.7167807220741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,1.79087190944144,0.426909383510862,0,1.88632924423832,0,0,0,0,0,0 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| ||
|short_description=p@chr20:10400359..10400384,- | |short_description=p@chr20:10400359..10400384,- | ||
}} | }} |
Revision as of 09:42, 19 November 2012
Short description: | p@chr20:10400359..10400384, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:10400359..10400384, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-30 | 253 |
endo-epithelial cell | 1.12e-27 | 42 |
endodermal cell | 1.14e-24 | 58 |
respiratory epithelial cell | 5.14e-21 | 13 |
squamous epithelial cell | 6.49e-15 | 63 |
general ecto-epithelial cell | 7.05e-15 | 14 |
epithelial cell of tracheobronchial tree | 1.46e-11 | 9 |
epithelial cell of lower respiratory tract | 1.46e-11 | 9 |
epithelial cell of alimentary canal | 4.86e-10 | 20 |
duct epithelial cell | 1.01e-09 | 3 |
branched duct epithelial cell | 1.01e-09 | 3 |
tracheal epithelial cell | 1.01e-09 | 3 |
tracheoblast | 1.01e-09 | 3 |
epithelial cell of Malassez | 3.72e-09 | 3 |
stratified squamous epithelial cell | 3.85e-08 | 6 |
keratin accumulating cell | 3.85e-08 | 6 |
stratified epithelial cell | 3.85e-08 | 6 |
keratinizing barrier epithelial cell | 3.85e-08 | 6 |
epithelial fate stem cell | 3.85e-08 | 6 |
stratified epithelial stem cell | 3.85e-08 | 6 |
surface ectodermal cell | 3.85e-08 | 6 |
ecto-epithelial cell | 6.23e-08 | 34 |
epithelial cell of pancreas | 3.01e-07 | 4 |
transitional epithelial cell | 4.42e-07 | 4 |
urothelial cell | 4.42e-07 | 4 |
embryonic cell | 6.14e-07 | 250 |
epithelial cell of lung | 6.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pancreas | 9.10e-14 | 10 |
endoderm-derived structure | 5.57e-12 | 160 |
endoderm | 5.57e-12 | 160 |
presumptive endoderm | 5.57e-12 | 160 |
mucosa of oral region | 8.37e-12 | 4 |
respiratory system mucosa | 8.37e-12 | 4 |
respiratory system | 1.01e-10 | 74 |
mucosa | 5.59e-10 | 20 |
mouth mucosa | 6.95e-10 | 13 |
urothelium | 2.54e-09 | 5 |
viscus | 3.54e-09 | 18 |
epithelial bud | 4.65e-09 | 37 |
epithelial fold | 5.23e-09 | 47 |
respiratory tract | 8.64e-09 | 54 |
trunk region element | 2.15e-08 | 101 |
thoracic cavity element | 2.30e-08 | 34 |
thoracic cavity | 2.30e-08 | 34 |
thoracic segment organ | 4.65e-08 | 35 |
endo-epithelium | 5.56e-08 | 82 |
transitional epithelium | 9.05e-08 | 6 |
digestive system | 1.45e-07 | 145 |
digestive tract | 1.45e-07 | 145 |
primitive gut | 1.45e-07 | 145 |
respiratory system epithelium | 5.81e-07 | 28 |
jaw skeleton | 5.82e-07 | 4 |
splanchnocranium | 5.82e-07 | 4 |
respiratory tract epithelium | 6.16e-07 | 19 |
lung epithelium | 6.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.71e-28 | 14 |
carcinoma | 1.83e-15 | 106 |
cell type cancer | 2.02e-11 | 143 |
endocrine gland cancer | 7.82e-08 | 6 |
pancreatic cancer | 3.01e-07 | 4 |
pancreas adenocarcinoma | 3.44e-07 | 2 |
pancreatic carcinoma | 3.44e-07 | 2 |
pancreatic ductal adenocarcinoma | 3.44e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.