FFCP PHASE1:Hg19::chrX:123095546..123095644,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!1.12e-22!45;CL:0002057!2.05e-21!42;CL:0000763!2.34e-19!112;CL:0000049!2.34e-19!112;CL:0000766!9.39e-18!76;CL:0000839!2.91e-16!70;CL:0000557!2.96e-15!71;CL:0002009!3.09e-13!65;CL:0002194!4.36e-13!63;CL:0000576!4.36e-13!63;CL:0000040!4.36e-13!63;CL:0000559!4.36e-13!63;CL:0000037!1.19e-07!172;CL:0000566!1.19e-07!172;CL:0002032!2.70e-07!165;CL:0000837!2.70e-07!165 | |ontology_enrichment_celltype=CL:0000860!1.12e-22!45;CL:0002057!2.05e-21!42;CL:0000763!2.34e-19!112;CL:0000049!2.34e-19!112;CL:0000766!9.39e-18!76;CL:0000839!2.91e-16!70;CL:0000557!2.96e-15!71;CL:0002009!3.09e-13!65;CL:0002194!4.36e-13!63;CL:0000576!4.36e-13!63;CL:0000040!4.36e-13!63;CL:0000559!4.36e-13!63;CL:0000037!1.19e-07!172;CL:0000566!1.19e-07!172;CL:0002032!2.70e-07!165;CL:0000837!2.70e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.75e-18;33!CL:0002057;5.75e-18;33!CL:0000576;5.82e-13;48!CL:0000473;5.55e-11;39!CL:0000234;5.55e-11;39!CL:0000766;1.90e-09;69!CL:0000763;3.88e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;5.75e-18;33!CL:0002057;5.75e-18;33!CL:0000576;5.82e-13;48!CL:0000473;5.55e-11;39!CL:0000234;5.55e-11;39!CL:0000766;1.90e-09;69!CL:0000763;3.88e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.05e-21,42;CL:0002057,2.05e-21,42;CL:0000763,1.44e-18,108;CL:0000049,1.44e-18,108;CL:0000766,5.19e-17,72;CL:0000473,3.08e-16,48;CL:0000234,3.08e-16,48;CL:0000839,1.57e-15,66;CL:0000557,1.61e-14,67;CL:0002009,1.63e-12,61;CL:0002194,2.29e-12,59;CL:0000576,2.29e-12,59;CL:0000040,2.29e-12,59;CL:0000559,2.29e-12,59;CL:0000037,4.18e-07,168;CL:0002032,9.31e-07,161;CL:0000837,9.31e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-15;42 | |ontology_enrichment_development_v019=CL:0002057;1.25e-15;42 | ||
|ontology_enrichment_disease=DOID:162!2.40e-14!235;DOID:14566!5.33e-14!239;DOID:0050687!4.40e-13!143;DOID:305!1.04e-11!106 | |ontology_enrichment_disease=DOID:162!2.40e-14!235;DOID:14566!5.33e-14!239;DOID:0050687!4.40e-13!143;DOID:305!1.04e-11!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-14,235;DOID:14566,5.33e-14,239;DOID:0050687,4.40e-13,143;DOID:305,1.04e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-16!102;UBERON:0003061!1.26e-16!102;UBERON:0002193!2.10e-13!112;UBERON:0001474!5.32e-12!86;UBERON:0002371!5.35e-12!80;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0002405!3.05e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.26e-16!102;UBERON:0003061!1.26e-16!102;UBERON:0002193!2.10e-13!112;UBERON:0001474!5.32e-12!86;UBERON:0002371!5.35e-12!80;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0002405!3.05e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.31e-16,98;UBERON:0003061,7.31e-16,98;UBERON:0002193,1.11e-12,108;UBERON:0001474,2.76e-11,82;UBERON:0002371,2.79e-11,76;UBERON:0004765,6.13e-11,90;UBERON:0001434,8.58e-11,100;UBERON:0002405,1.75e-08,93 | |||
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| ||
|short_description=p1@STAG2 | |short_description=p1@STAG2 | ||
}} | }} |
Revision as of 12:54, 19 November 2012
Short description: | p1@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371144, ENST00000371145, ENST00000371157, ENST00000458176, ENST00000466748, NM_001042750, NM_001042751, NM_006603, uc004euc.2, uc004eud.2, uc004eue.2_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | Q8N3U4E7ERE6Q6MZM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.05e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.05e-21 | 42 |
myeloid cell | 1.44e-18 | 108 |
common myeloid progenitor | 1.44e-18 | 108 |
myeloid leukocyte | 5.19e-17 | 72 |
defensive cell | 3.08e-16 | 48 |
phagocyte | 3.08e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.57e-15 | 66 |
granulocyte monocyte progenitor cell | 1.61e-14 | 67 |
macrophage dendritic cell progenitor | 1.63e-12 | 61 |
monopoietic cell | 2.29e-12 | 59 |
monocyte | 2.29e-12 | 59 |
monoblast | 2.29e-12 | 59 |
promonocyte | 2.29e-12 | 59 |
hematopoietic stem cell | 4.18e-07 | 168 |
hematopoietic oligopotent progenitor cell | 9.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.31e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.31e-16 | 98 |
blood island | 7.31e-16 | 98 |
hemolymphoid system | 1.11e-12 | 108 |
bone element | 2.76e-11 | 82 |
bone marrow | 2.79e-11 | 76 |
skeletal element | 6.13e-11 | 90 |
skeletal system | 8.58e-11 | 100 |
immune system | 1.75e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-14 | 235 |
disease of cellular proliferation | 5.33e-14 | 239 |
cell type cancer | 4.40e-13 | 143 |
carcinoma | 1.04e-11 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.