FFCP PHASE1:Hg19::chr10:105677503..105677526,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79991|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26200|TSSclassifier=S|UniProt=Q9H668|association_with_transcript=-76bp_to_ENST00000369764,uc001kxl.2_5end|description=CAGE_peak_4_at_OBFC1_5end|id=chr10:105677503..105677526,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000708;2.45e-08;3!CL:0002552;5.50e-08;5!CL:0002564;8.08e-08;3!CL:0002559;2.79e-07;5|ontology_enrichment_celltype_v019_2=CL:0000708,2.51e-08,3;CL:0002552,6.67e-08,5;CL:0002564,7.90e-08,3;CL:0002559,2.57e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0011135;5.75e-12;5!UBERON:0002216;5.75e-12;5!UBERON:0011134;5.75e-12;5!UBERON:0002209;5.75e-12;5!UBERON:0002213;5.75e-12;5!UBERON:0007844;5.75e-12;5!UBERON:0011138;5.75e-12;5!UBERON:0001130;5.75e-12;5!UBERON:0001066;5.75e-12;5!UBERON:0001468;5.75e-12;5!UBERON:0002067;1.88e-08;9!UBERON:0003210;2.45e-08;3!UBERON:0000075;4.10e-08;16!UBERON:0002242;8.08e-08;3!UBERON:0010371;1.91e-07;31!UBERON:0006876;2.10e-07;11!UBERON:0004905;2.71e-07;8!UBERON:0000982;2.71e-07;8!UBERON:0004770;2.71e-07;8!UBERON:0002073;2.79e-07;5!UBERON:0001828;3.72e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0011135,4.41e-12,5;UBERON:0002216,4.41e-12,5;UBERON:0011134,4.41e-12,5;UBERON:0002209,4.41e-12,5;UBERON:0002213,4.41e-12,5;UBERON:0005856,4.41e-12,5;UBERON:0005866,4.41e-12,5;UBERON:0005863,4.41e-12,5;UBERON:0007844,4.41e-12,5;UBERON:0011138,4.41e-12,5;UBERON:0001130,4.41e-12,5;UBERON:0001066,4.41e-12,5;UBERON:0001468,4.41e-12,5;UBERON:0002067,2.22e-08,9;UBERON:0004016,2.22e-08,9;UBERON:0010083,2.22e-08,9;UBERON:0003210,2.51e-08,3;UBERON:0000075,3.89e-08,16;UBERON:0002242,7.90e-08,3;UBERON:0003068,7.90e-08,3;UBERON:0002328,7.90e-08,3;UBERON:0004880,7.90e-08,3;UBERON:0005085,9.57e-08,31;UBERON:0004905,2.31e-07,8;UBERON:0000982,2.31e-07,8;UBERON:0004770,2.31e-07,8;UBERON:0006876,2.40e-07,11;UBERON:0002073,2.57e-07,5;UBERON:0005086,2.57e-07,5;UBERON:0001828,5.45e-07,8|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,1.74753097704138,1.05506791291381,2.72285976512103,2.98257638155124,0,0.602694528023977,0,0.487932798790507,1.60057375499824,1.63200552995402,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0.919421224478927,0.90361775633475,1.10926203050036,0.154934401160603,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,1.67186495390678,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,0.664601683750863,0.541607727530031,2.81800903396485,1.56071217071854,1.47994114143309,0.552700035571697,1.73881851441031,0.14828656316206,0.267540828089713,0,0.679856056185397,0,0.68725489096526,0.253019692019503,0,0,0.950452044448374,1.20460095262218,0.511946444617674,0,0.236777252044017,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0,0,0,1.60709189178915,0.443458794925128,0.43917392846563,0.458426764241994,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,0,0.550236083880135,1.8809546988313,2.84258435086262,1.77883131343355,0.33472061276467,1.20848795132744,8.36299316290364,0.488124115096339,0.735326160691737,0,0.625098097988558,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0.49333509683432,1.8672662123986,1.0776853765575,0.980771418680752,26.3361924102181,14.404398112,1.17160715916898,4.05808099879417,1.1409436430889,1.79338416662161,0.587172493218824,1.13311061057692,0.702254033511242,5.71631679513701,2.08818339430006,4.85631171526098,1.18800285728205,0,1.82032272387605,0.718618141816238,2.18836948140286,1.25118519871964,2.21651292387346,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.169560592310488,0.773043412653187,1.09098448236334,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,4.14404764057442,1.39310378409594,1.44375896333917,0.473227200159376,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,1.18635309555548,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,3.08822058537346,1.53650399572076,1.1240175325762,0.100528972411631,0.648119116109707,0,2.07986957055916,0,1.15930404975077,0.352226082707465,0.433099343283221,0,0.570762456703795,0,0.8584861620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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79991 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26200 | |||
|TSSclassifier=S | |||
|UniProt=Q9H668 | |||
|association_with_transcript=-76bp_to_ENST00000369764,uc001kxl.2_5end | |||
|description=CAGE_peak_4_at_OBFC1_5end | |||
|id=chr10:105677503..105677526,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000708;2.45e-08;3!CL:0002552;5.50e-08;5!CL:0002564;8.08e-08;3!CL:0002559;2.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.51e-08,3;CL:0002552,6.67e-08,5;CL:0002564,7.90e-08,3;CL:0002559,2.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;5.75e-12;5!UBERON:0002216;5.75e-12;5!UBERON:0011134;5.75e-12;5!UBERON:0002209;5.75e-12;5!UBERON:0002213;5.75e-12;5!UBERON:0007844;5.75e-12;5!UBERON:0011138;5.75e-12;5!UBERON:0001130;5.75e-12;5!UBERON:0001066;5.75e-12;5!UBERON:0001468;5.75e-12;5!UBERON:0002067;1.88e-08;9!UBERON:0003210;2.45e-08;3!UBERON:0000075;4.10e-08;16!UBERON:0002242;8.08e-08;3!UBERON:0010371;1.91e-07;31!UBERON:0006876;2.10e-07;11!UBERON:0004905;2.71e-07;8!UBERON:0000982;2.71e-07;8!UBERON:0004770;2.71e-07;8!UBERON:0002073;2.79e-07;5!UBERON:0001828;3.72e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,4.41e-12,5;UBERON:0002216,4.41e-12,5;UBERON:0011134,4.41e-12,5;UBERON:0002209,4.41e-12,5;UBERON:0002213,4.41e-12,5;UBERON:0005856,4.41e-12,5;UBERON:0005866,4.41e-12,5;UBERON:0005863,4.41e-12,5;UBERON:0007844,4.41e-12,5;UBERON:0011138,4.41e-12,5;UBERON:0001130,4.41e-12,5;UBERON:0001066,4.41e-12,5;UBERON:0001468,4.41e-12,5;UBERON:0002067,2.22e-08,9;UBERON:0004016,2.22e-08,9;UBERON:0010083,2.22e-08,9;UBERON:0003210,2.51e-08,3;UBERON:0000075,3.89e-08,16;UBERON:0002242,7.90e-08,3;UBERON:0003068,7.90e-08,3;UBERON:0002328,7.90e-08,3;UBERON:0004880,7.90e-08,3;UBERON:0005085,9.57e-08,31;UBERON:0004905,2.31e-07,8;UBERON:0000982,2.31e-07,8;UBERON:0004770,2.31e-07,8;UBERON:0006876,2.40e-07,11;UBERON:0002073,2.57e-07,5;UBERON:0005086,2.57e-07,5;UBERON:0001828,5.45e-07,8 | |||
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| |||
|short_description=p4@OBFC1 | |||
}} |
Revision as of 11:33, 10 September 2013
Short description: | p4@OBFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_OBFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000369764, uc001kxl.2_5end |
EntrezGene: | OBFC1 |
HGNC: | 26200 |
UniProt: | Q9H668 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.51e-08 | 3 |
fibroblast of gingiva | 6.67e-08 | 5 |
nucleus pulposus cell of intervertebral disc | 7.90e-08 | 3 |
hair follicle cell | 2.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 4.41e-12 | 5 |
symphysis | 4.41e-12 | 5 |
nonsynovial joint | 4.41e-12 | 5 |
fibrous joint | 4.41e-12 | 5 |
cartilaginous joint | 4.41e-12 | 5 |
developing mesenchymal condensation | 4.41e-12 | 5 |
pre-cartilage condensation | 4.41e-12 | 5 |
cartilaginous condensation | 4.41e-12 | 5 |
cartilage element | 4.41e-12 | 5 |
post-cranial axial skeletal system | 4.41e-12 | 5 |
vertebral column | 4.41e-12 | 5 |
intervertebral disk | 4.41e-12 | 5 |
intervertebral joint | 4.41e-12 | 5 |
dermis | 2.22e-08 | 9 |
dermatome | 2.22e-08 | 9 |
future dermis | 2.22e-08 | 9 |
blood-cerebrospinal fluid barrier | 2.51e-08 | 3 |
subdivision of skeletal system | 3.89e-08 | 16 |
nucleus pulposus | 7.90e-08 | 3 |
axial mesoderm | 7.90e-08 | 3 |
notochord | 7.90e-08 | 3 |
chordamesoderm | 7.90e-08 | 3 |
ectodermal placode | 9.57e-08 | 31 |
articulation | 2.31e-07 | 8 |
skeletal joint | 2.31e-07 | 8 |
articular system | 2.31e-07 | 8 |
vasculature of organ | 2.40e-07 | 11 |
hair follicle | 2.57e-07 | 5 |
hair follicle placode | 2.57e-07 | 5 |
gingiva | 5.45e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.