FFCP PHASE1:Hg19::chr11:2973356..2973367,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4676|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7640|TSSclassifier=W|UniProt=|association_with_transcript=-89bp_to_ENST00000526023_5end|description=CAGE_peak_11_at_NAP1L4_5end|id=chr11:2973356..2973367,-|ontology_enrichment_celltype=CL:0000128!1.48e-09!7;CL:0000126!1.48e-09!7;CL:0000127!1.48e-09!7;CL:0002453!1.48e-09!7;CL:0000064!1.62e-09!3;CL:0005012!1.62e-09!3;CL:0000067!1.62e-09!3;CL:0002304!1.62e-09!3;CL:0002603!2.92e-09!3;CL:0000075!5.58e-08!27;CL:0000306!6.71e-07!4;CL:0002222!6.71e-07!4;CL:0002224!6.71e-07!4;CL:0002543!6.79e-07!6;CL:1000449!7.19e-07!16|ontology_enrichment_celltype_v019=CL:0000064;3.73e-47;3!CL:0000067;3.73e-47;3!CL:0005012;3.73e-47;3!CL:0002304;3.73e-47;3!CL:0002603;3.63e-21;3!CL:0000222;1.65e-16;1!CL:0000128;1.24e-09;7!CL:0000126;1.24e-09;7!CL:0000127;1.24e-09;7!CL:0000075;1.51e-09;27!CL:0002554;6.42e-09;2!CL:0000710;1.28e-07;20|ontology_enrichment_celltype_v019_2=CL:0000064,4.05e-47,3;CL:0000067,4.05e-47,3;CL:0005012,4.05e-47,3;CL:0002304,4.05e-47,3;CL:0002603,2.17e-21,3;CL:0000128,9.95e-10,7;CL:0000126,9.95e-10,7;CL:0000127,9.95e-10,7;CL:0002453,9.95e-10,7;CL:0000075,1.51e-09,27;CL:0002554,5.49e-09,2;CL:0000133,7.11e-09,59;CL:0000710,1.29e-07,20;CL:0000221,2.91e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!3.72e-15!11;UBERON:0000488!6.00e-12!4;UBERON:0001778!1.62e-09!3;UBERON:0001775!1.62e-09!3;UBERON:0001801!5.13e-09!14;UBERON:0002200!2.02e-08!11;UBERON:0006876!2.02e-08!11;UBERON:0000019!4.39e-08!19;UBERON:0000047!4.39e-08!19;UBERON:0004088!4.39e-08!19;UBERON:0003072!4.39e-08!19;UBERON:0003071!4.39e-08!19;UBERON:0004128!4.39e-08!19;UBERON:0002203!6.46e-08!6;UBERON:0001768!6.46e-08!6;UBERON:0000970!1.34e-07!20;UBERON:0005085!1.61e-07!29;UBERON:0002104!3.64e-07!21;UBERON:0001456!3.64e-07!21;UBERON:0010077!6.71e-07!4;UBERON:0005389!6.71e-07!4;UBERON:0000484!6.71e-07!4;UBERON:0002546!6.71e-07!4;UBERON:0000965!6.71e-07!4;UBERON:0001803!6.71e-07!4;UBERON:0003073!6.71e-07!4;UBERON:0005426!6.71e-07!4;UBERON:0004211!7.19e-07!16;UBERON:0001285!7.19e-07!16;UBERON:0007684!7.19e-07!16;UBERON:0003220!7.19e-07!16;UBERON:0004208!7.19e-07!16|ontology_enrichment_uberon_v019=UBERON:0001778;3.73e-47;3!UBERON:0001775;3.73e-47;3!UBERON:0000488;1.39e-35;4!UBERON:0002203;5.51e-24;6!UBERON:0001768;5.51e-24;6!UBERON:0002200;5.51e-24;6!UBERON:0007625;5.79e-23;11!UBERON:0001801;3.96e-18;14!UBERON:0007195;1.65e-16;1!UBERON:0000019;1.90e-13;19!UBERON:0000047;1.90e-13;19!UBERON:0004088;1.90e-13;19!UBERON:0010230;1.90e-13;19!UBERON:0006876;2.15e-13;11!UBERON:0000970;8.60e-13;20!UBERON:0002104;3.38e-12;21!UBERON:0001456;3.38e-12;21!UBERON:0010371;4.47e-12;31!UBERON:0000020;3.67e-11;23!UBERON:0002037;4.37e-11;6!UBERON:0001032;1.04e-10;24!UBERON:0004456;1.04e-10;24!UBERON:0002680;1.09e-07;9!UBERON:0001895;1.09e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.05e-47,3;UBERON:0001775,4.05e-47,3;UBERON:0000488,1.48e-35,4;UBERON:0002203,5.74e-24,6;UBERON:0001768,5.74e-24,6;UBERON:0002200,5.74e-24,6;UBERON:0007625,5.80e-23,11;UBERON:0001801,3.97e-18,14;UBERON:0007195,3.07e-16,1;UBERON:0006876,2.20e-13,11;UBERON:0000019,8.61e-13,20;UBERON:0000047,8.61e-13,20;UBERON:0010312,8.61e-13,20;UBERON:0004088,8.61e-13,20;UBERON:0010230,8.61e-13,20;UBERON:0003072,8.61e-13,20;UBERON:0004128,8.61e-13,20;UBERON:0003071,8.61e-13,20;UBERON:0005085,1.54e-12,31;UBERON:0000970,3.39e-12,21;UBERON:0002104,3.39e-12,21;UBERON:0001456,1.18e-11,22;UBERON:0002037,3.39e-11,6;UBERON:0006215,3.39e-11,6;UBERON:0000020,1.04e-10,24;UBERON:0001032,1.04e-10,24;UBERON:0004456,1.04e-10,24;UBERON:0002680,9.20e-08,9;UBERON:0001895,9.20e-08,9;UBERON:0010092,9.20e-08,9;UBERON:0010371,9.68e-07,104|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96993692922861,1.42800483870977,0.940364164434263,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55244006342983,2.21729397462564,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,2.88662684050547,0.695582429850461,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.448524337381443,0,0.1466765716419,0,0,0,1.59562869950922,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.623912584592421,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,1.13733384070897,0.340187410553031,0.431831832204279,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@NAP1L4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7640 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-89bp_to_ENST00000526023_5end | |||
|description=CAGE_peak_11_at_NAP1L4_5end | |||
|id=chr11:2973356..2973367,- | |||
|ontology_enrichment_celltype=CL:0000128!1.48e-09!7;CL:0000126!1.48e-09!7;CL:0000127!1.48e-09!7;CL:0002453!1.48e-09!7;CL:0000064!1.62e-09!3;CL:0005012!1.62e-09!3;CL:0000067!1.62e-09!3;CL:0002304!1.62e-09!3;CL:0002603!2.92e-09!3;CL:0000075!5.58e-08!27;CL:0000306!6.71e-07!4;CL:0002222!6.71e-07!4;CL:0002224!6.71e-07!4;CL:0002543!6.79e-07!6;CL:1000449!7.19e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.73e-47;3!CL:0000067;3.73e-47;3!CL:0005012;3.73e-47;3!CL:0002304;3.73e-47;3!CL:0002603;3.63e-21;3!CL:0000222;1.65e-16;1!CL:0000128;1.24e-09;7!CL:0000126;1.24e-09;7!CL:0000127;1.24e-09;7!CL:0000075;1.51e-09;27!CL:0002554;6.42e-09;2!CL:0000710;1.28e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.05e-47,3;CL:0000067,4.05e-47,3;CL:0005012,4.05e-47,3;CL:0002304,4.05e-47,3;CL:0002603,2.17e-21,3;CL:0000128,9.95e-10,7;CL:0000126,9.95e-10,7;CL:0000127,9.95e-10,7;CL:0002453,9.95e-10,7;CL:0000075,1.51e-09,27;CL:0002554,5.49e-09,2;CL:0000133,7.11e-09,59;CL:0000710,1.29e-07,20;CL:0000221,2.91e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.72e-15!11;UBERON:0000488!6.00e-12!4;UBERON:0001778!1.62e-09!3;UBERON:0001775!1.62e-09!3;UBERON:0001801!5.13e-09!14;UBERON:0002200!2.02e-08!11;UBERON:0006876!2.02e-08!11;UBERON:0000019!4.39e-08!19;UBERON:0000047!4.39e-08!19;UBERON:0004088!4.39e-08!19;UBERON:0003072!4.39e-08!19;UBERON:0003071!4.39e-08!19;UBERON:0004128!4.39e-08!19;UBERON:0002203!6.46e-08!6;UBERON:0001768!6.46e-08!6;UBERON:0000970!1.34e-07!20;UBERON:0005085!1.61e-07!29;UBERON:0002104!3.64e-07!21;UBERON:0001456!3.64e-07!21;UBERON:0010077!6.71e-07!4;UBERON:0005389!6.71e-07!4;UBERON:0000484!6.71e-07!4;UBERON:0002546!6.71e-07!4;UBERON:0000965!6.71e-07!4;UBERON:0001803!6.71e-07!4;UBERON:0003073!6.71e-07!4;UBERON:0005426!6.71e-07!4;UBERON:0004211!7.19e-07!16;UBERON:0001285!7.19e-07!16;UBERON:0007684!7.19e-07!16;UBERON:0003220!7.19e-07!16;UBERON:0004208!7.19e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.73e-47;3!UBERON:0001775;3.73e-47;3!UBERON:0000488;1.39e-35;4!UBERON:0002203;5.51e-24;6!UBERON:0001768;5.51e-24;6!UBERON:0002200;5.51e-24;6!UBERON:0007625;5.79e-23;11!UBERON:0001801;3.96e-18;14!UBERON:0007195;1.65e-16;1!UBERON:0000019;1.90e-13;19!UBERON:0000047;1.90e-13;19!UBERON:0004088;1.90e-13;19!UBERON:0010230;1.90e-13;19!UBERON:0006876;2.15e-13;11!UBERON:0000970;8.60e-13;20!UBERON:0002104;3.38e-12;21!UBERON:0001456;3.38e-12;21!UBERON:0010371;4.47e-12;31!UBERON:0000020;3.67e-11;23!UBERON:0002037;4.37e-11;6!UBERON:0001032;1.04e-10;24!UBERON:0004456;1.04e-10;24!UBERON:0002680;1.09e-07;9!UBERON:0001895;1.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.05e-47,3;UBERON:0001775,4.05e-47,3;UBERON:0000488,1.48e-35,4;UBERON:0002203,5.74e-24,6;UBERON:0001768,5.74e-24,6;UBERON:0002200,5.74e-24,6;UBERON:0007625,5.80e-23,11;UBERON:0001801,3.97e-18,14;UBERON:0007195,3.07e-16,1;UBERON:0006876,2.20e-13,11;UBERON:0000019,8.61e-13,20;UBERON:0000047,8.61e-13,20;UBERON:0010312,8.61e-13,20;UBERON:0004088,8.61e-13,20;UBERON:0010230,8.61e-13,20;UBERON:0003072,8.61e-13,20;UBERON:0004128,8.61e-13,20;UBERON:0003071,8.61e-13,20;UBERON:0005085,1.54e-12,31;UBERON:0000970,3.39e-12,21;UBERON:0002104,3.39e-12,21;UBERON:0001456,1.18e-11,22;UBERON:0002037,3.39e-11,6;UBERON:0006215,3.39e-11,6;UBERON:0000020,1.04e-10,24;UBERON:0001032,1.04e-10,24;UBERON:0004456,1.04e-10,24;UBERON:0002680,9.20e-08,9;UBERON:0001895,9.20e-08,9;UBERON:0010092,9.20e-08,9;UBERON:0010371,9.68e-07,104 | |||
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|short_description=p11@NAP1L4 | |||
}} |
Revision as of 17:23, 10 September 2013
Short description: | p11@NAP1L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_NAP1L4_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_ENST00000526023_5end |
EntrezGene: | NAP1L4 |
HGNC: | 7640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.05e-47 | 3 |
ciliated epithelial cell | 4.05e-47 | 3 |
multi-ciliated epithelial cell | 4.05e-47 | 3 |
non-pigmented ciliary epithelial cell | 4.05e-47 | 3 |
astrocyte of the cerebellum | 2.17e-21 | 3 |
oligodendrocyte | 9.95e-10 | 7 |
macroglial cell | 9.95e-10 | 7 |
astrocyte | 9.95e-10 | 7 |
oligodendrocyte precursor cell | 9.95e-10 | 7 |
columnar/cuboidal epithelial cell | 1.51e-09 | 27 |
fibroblast of lymphatic vessel | 5.49e-09 | 2 |
neurectodermal cell | 7.11e-09 | 59 |
neurecto-epithelial cell | 1.29e-07 | 20 |
ectodermal cell | 2.91e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.05e-47 | 3 |
ciliary body | 4.05e-47 | 3 |
atypical epithelium | 1.48e-35 | 4 |
vasculature of eye | 5.74e-24 | 6 |
uvea | 5.74e-24 | 6 |
vasculature of head | 5.74e-24 | 6 |
pigment epithelium of eye | 5.80e-23 | 11 |
anterior segment of eyeball | 3.97e-18 | 14 |
stroma of bone marrow | 3.07e-16 | 1 |
vasculature of organ | 2.20e-13 | 11 |
camera-type eye | 8.61e-13 | 20 |
simple eye | 8.61e-13 | 20 |
immature eye | 8.61e-13 | 20 |
ocular region | 8.61e-13 | 20 |
eyeball of camera-type eye | 8.61e-13 | 20 |
optic cup | 8.61e-13 | 20 |
optic vesicle | 8.61e-13 | 20 |
eye primordium | 8.61e-13 | 20 |
ectodermal placode | 1.54e-12 | 31 |
eye | 3.39e-12 | 21 |
visual system | 3.39e-12 | 21 |
face | 1.18e-11 | 22 |
cerebellum | 3.39e-11 | 6 |
rhombic lip | 3.39e-11 | 6 |
sense organ | 1.04e-10 | 24 |
sensory system | 1.04e-10 | 24 |
entire sense organ system | 1.04e-10 | 24 |
regional part of metencephalon | 9.20e-08 | 9 |
metencephalon | 9.20e-08 | 9 |
future metencephalon | 9.20e-08 | 9 |
ecto-epithelium | 9.68e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.